RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 HECW1Q76N89 1606 aa20.29■□□□□ 0.84
SPIDR-201ENST00000297423 NUP160Q12769 1436 aa20.29■□□□□ 0.84
SPIDR-201ENST00000297423 CFAP43Q8NDM7 1665 aa20.28■□□□□ 0.84
SPIDR-201ENST00000297423 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
SPIDR-201ENST00000297423 CCER2I3L3R5 266 aa20.27■□□□□ 0.84
SPIDR-201ENST00000297423 DISP1Q96F81 1524 aa20.26■□□□□ 0.83
SPIDR-201ENST00000297423 KIAA0556O60303 1618 aa20.25■□□□□ 0.83
SPIDR-201ENST00000297423 IL27Q8NEV9 243 aa20.25■□□□□ 0.83
SPIDR-201ENST00000297423 EPRSP07814 1512 aaKnown RBP20.25■□□□□ 0.83
SPIDR-201ENST00000297423 PLEKHD1A6NEE1 506 aa20.25■□□□□ 0.83
SPIDR-201ENST00000297423 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
SPIDR-201ENST00000297423 PRG4Q92954 1404 aaPredicted RBP20.24■□□□□ 0.83
SPIDR-201ENST00000297423 NCOA2Q15596 1464 aa20.23■□□□□ 0.83
SPIDR-201ENST00000297423 CDK13Q14004 1512 aaKnown RBP20.22■□□□□ 0.83
SPIDR-201ENST00000297423 EHBP1L1Q8N3D4 1523 aa20.22■□□□□ 0.83
SPIDR-201ENST00000297423 PTPRGP23470 1445 aa20.22■□□□□ 0.83
SPIDR-201ENST00000297423 FGD6Q6ZV73 1430 aa20.21■□□□□ 0.83
SPIDR-201ENST00000297423 ZNF777Q9ULD5 760 aaPredicted RBP20.19■□□□□ 0.82
SPIDR-201ENST00000297423 MYOM3Q5VTT5 1437 aa20.19■□□□□ 0.82
SPIDR-201ENST00000297423 CHIC2Q9UKJ5 165 aa20.18■□□□□ 0.82
SPIDR-201ENST00000297423 PLB1Q6P1J6 1458 aa20.17■□□□□ 0.82
SPIDR-201ENST00000297423 SETD5Q9C0A6 1442 aa20.17■□□□□ 0.82
SPIDR-201ENST00000297423 ZNF326Q5BKZ1 582 aaKnown RBP20.16■□□□□ 0.82
SPIDR-201ENST00000297423 DAXXQ9UER7 740 aaPredicted RBP20.16■□□□□ 0.82
SPIDR-201ENST00000297423 SUPT6HQ7KZ85 1726 aaKnown RBP20.15■□□□□ 0.82
SPIDR-201ENST00000297423 NEFMP07197 916 aa20.15■□□□□ 0.82
SPIDR-201ENST00000297423 CFDP1Q9UEE9 299 aaPredicted RBP20.13■□□□□ 0.81
SPIDR-201ENST00000297423 RAPGEF6Q8TEU7 1601 aa20.12■□□□□ 0.81
SPIDR-201ENST00000297423 NUP153P49790 1475 aaKnown RBP20.11■□□□□ 0.81
SPIDR-201ENST00000297423 RRP7BPQ9NSQ0 103 aa20.1■□□□□ 0.81
SPIDR-201ENST00000297423 CCDC184Q52MB2 194 aa20.1■□□□□ 0.81
SPIDR-201ENST00000297423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.09■□□□□ 0.81
SPIDR-201ENST00000297423 CHD1O14646 1710 aa20.07■□□□□ 0.8
SPIDR-201ENST00000297423 TROQ12816 1431 aaPredicted RBP20.05■□□□□ 0.8
SPIDR-201ENST00000297423 MAGI3Q5TCQ9 1506 aa20.04■□□□□ 0.8
SPIDR-201ENST00000297423 IPO9Q96P70 1041 aaKnown RBP20.03■□□□□ 0.8
SPIDR-201ENST00000297423 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.8
SPIDR-201ENST00000297423 ARXQ96QS3 562 aa20.02■□□□□ 0.79
SPIDR-201ENST00000297423 MIA2Q96PC5 1412 aa20.01■□□□□ 0.79
SPIDR-201ENST00000297423 LRRIQ1Q96JM4 1722 aa20■□□□□ 0.79
SPIDR-201ENST00000297423 OSCARQ8IYS5 282 aa20■□□□□ 0.79
SPIDR-201ENST00000297423 UACAQ9BZF9 1416 aa19.99■□□□□ 0.79
SPIDR-201ENST00000297423 EIF4G2P78344 907 aaKnown RBP eCLIP19.98■□□□□ 0.793e-6■■■□□ 18.8
SPIDR-201ENST00000297423 ZNF644Q9H582 1327 aaPredicted RBP19.98■□□□□ 0.79
SPIDR-201ENST00000297423 PTPN23Q9H3S7 1636 aa19.98■□□□□ 0.79
SPIDR-201ENST00000297423 ATP10BO94823 1461 aa19.95■□□□□ 0.78
SPIDR-201ENST00000297423 TSPY4P0CV99 314 aa19.94■□□□□ 0.78
SPIDR-201ENST00000297423 TSPY10P0CW01 314 aa19.94■□□□□ 0.78
SPIDR-201ENST00000297423 FOXD1Q16676 465 aa19.93■□□□□ 0.78
SPIDR-201ENST00000297423 NPM1P06748 294 aaKnown RBP eCLIP19.92■□□□□ 0.78
SPIDR-201ENST00000297423 ABCA8O94911 1581 aa19.9■□□□□ 0.78
SPIDR-201ENST00000297423 SLC4A3P48751 1232 aa19.9■□□□□ 0.78
SPIDR-201ENST00000297423 PTPRKQ15262 1439 aa19.89■□□□□ 0.78
SPIDR-201ENST00000297423 ARHGEF11O15085 1522 aa19.89■□□□□ 0.78
SPIDR-201ENST00000297423 HFM1A2PYH4 1435 aa19.89■□□□□ 0.77
SPIDR-201ENST00000297423 BRPF3Q9ULD4 1205 aa19.88■□□□□ 0.77
SPIDR-201ENST00000297423 TMC1Q8TDI8 760 aa19.87■□□□□ 0.77
SPIDR-201ENST00000297423 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
SPIDR-201ENST00000297423 ERICH6BQ5W0A0 696 aa19.85■□□□□ 0.77
SPIDR-201ENST00000297423 NAIPQ13075 1403 aa19.84■□□□□ 0.77
SPIDR-201ENST00000297423 KIF14Q15058 1648 aa19.84■□□□□ 0.77
SPIDR-201ENST00000297423 TIMELESSQ9UNS1 1208 aa19.84■□□□□ 0.77
SPIDR-201ENST00000297423 WASHC2AQ641Q2 1341 aa19.84■□□□□ 0.77
SPIDR-201ENST00000297423 GPATCH8Q9UKJ3 1502 aaKnown RBP19.83■□□□□ 0.77
SPIDR-201ENST00000297423 HNRNPMP52272 730 aaKnown RBP eCLIP19.83■□□□□ 0.763e-6■■■■□ 25.9
SPIDR-201ENST00000297423 DAPK1P53355 1430 aa19.83■□□□□ 0.76
SPIDR-201ENST00000297423 ERCC6L2Q5T890 1561 aa19.82■□□□□ 0.76
SPIDR-201ENST00000297423 PRKRIP1Q9H875 184 aaPredicted RBP19.82■□□□□ 0.76
SPIDR-201ENST00000297423 AKNAQ7Z591 1439 aa19.8■□□□□ 0.76
SPIDR-201ENST00000297423 CAMSAP2Q08AD1 1489 aa19.79■□□□□ 0.76
SPIDR-201ENST00000297423 ANKRD30AQ9BXX3 1397 aa19.79■□□□□ 0.76
SPIDR-201ENST00000297423 SLC4A1APQ9BWU0 796 aaKnown RBP19.79■□□□□ 0.76
SPIDR-201ENST00000297423 ABCC5O15440 1437 aa19.79■□□□□ 0.76
SPIDR-201ENST00000297423 SHROOM2Q13796 1616 aa19.78■□□□□ 0.76
SPIDR-201ENST00000297423 ABCC2Q92887 1545 aa19.78■□□□□ 0.76
SPIDR-201ENST00000297423 CLASP1Q7Z460 1538 aa19.78■□□□□ 0.76
SPIDR-201ENST00000297423 SKAP1Q86WV1 359 aa19.77■□□□□ 0.76
SPIDR-201ENST00000297423 ITSN2Q9NZM3 1697 aa19.76■□□□□ 0.75
SPIDR-201ENST00000297423 EFCAB2Q5VUJ9 269 aa19.76■□□□□ 0.75
SPIDR-201ENST00000297423 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
SPIDR-201ENST00000297423 MAPKBP1O60336 1514 aa19.75■□□□□ 0.75
SPIDR-201ENST00000297423 RSPH4AQ5TD94 716 aa19.74■□□□□ 0.75
SPIDR-201ENST00000297423 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
SPIDR-201ENST00000297423 EXOC6Q8TAG9 804 aa19.74■□□□□ 0.75
SPIDR-201ENST00000297423 ROCK1Q13464 1354 aa19.73■□□□□ 0.75
SPIDR-201ENST00000297423 ZBED9Q6R2W3 1325 aa19.73■□□□□ 0.75
SPIDR-201ENST00000297423 PDE4AP27815 886 aa19.72■□□□□ 0.75
SPIDR-201ENST00000297423 NUDCQ9Y266 331 aa19.72■□□□□ 0.75
SPIDR-201ENST00000297423 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
SPIDR-201ENST00000297423 L3MBTL2Q969R5 705 aa19.7■□□□□ 0.74
SPIDR-201ENST00000297423 C11orf95C9JLR9 678 aaPredicted RBP19.7■□□□□ 0.74
SPIDR-201ENST00000297423 ABCC10Q5T3U5 1492 aa19.68■□□□□ 0.74
SPIDR-201ENST00000297423 PLIN1O60240 522 aa19.68■□□□□ 0.74
SPIDR-201ENST00000297423 DNMT1P26358 1616 aaKnown RBP19.67■□□□□ 0.74
SPIDR-201ENST00000297423 ADCY10Q96PN6 1610 aa19.67■□□□□ 0.74
SPIDR-201ENST00000297423 C9orf84Q5VXU9 1444 aa19.66■□□□□ 0.74
SPIDR-201ENST00000297423 RGS3P49796 1198 aa19.65■□□□□ 0.74
SPIDR-201ENST00000297423 UHRF1BP1LA0JNW5 1464 aa19.65■□□□□ 0.74
SPIDR-201ENST00000297423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.743e-6■■■□□ 15.2
SPIDR-201ENST00000297423 NCOA1Q15788 1441 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms