RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.611e-6■■■■□ 24.5
PPP1CB-201ENST00000296122 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
PPP1CB-201ENST00000296122 DAPK1P53355 1430 aa18.88■□□□□ 0.61
PPP1CB-201ENST00000296122 NAIPQ13075 1403 aa18.88■□□□□ 0.61
PPP1CB-201ENST00000296122 GPATCH8Q9UKJ3 1502 aaKnown RBP18.88■□□□□ 0.61
PPP1CB-201ENST00000296122 PTPRKQ15262 1439 aa18.88■□□□□ 0.61
PPP1CB-201ENST00000296122 ABCC2Q92887 1545 aa18.87■□□□□ 0.61
PPP1CB-201ENST00000296122 TIMELESSQ9UNS1 1208 aa18.86■□□□□ 0.61
PPP1CB-201ENST00000296122 CAMSAP2Q08AD1 1489 aa18.85■□□□□ 0.61
PPP1CB-201ENST00000296122 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
PPP1CB-201ENST00000296122 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
PPP1CB-201ENST00000296122 ABCC5O15440 1437 aa18.83■□□□□ 0.61
PPP1CB-201ENST00000296122 SHROOM2Q13796 1616 aa18.83■□□□□ 0.6
PPP1CB-201ENST00000296122 ROCK1Q13464 1354 aa18.83■□□□□ 0.6
PPP1CB-201ENST00000296122 ERCC6L2Q5T890 1561 aa18.82■□□□□ 0.6
PPP1CB-201ENST00000296122 MPHOSPH9Q99550 1183 aa18.82■□□□□ 0.6
PPP1CB-201ENST00000296122 AKNAQ7Z591 1439 aa18.81■□□□□ 0.6
PPP1CB-201ENST00000296122 ARHGAP5Q13017 1502 aa18.8■□□□□ 0.6
PPP1CB-201ENST00000296122 UHRF1BP1LA0JNW5 1464 aa18.75■□□□□ 0.59
PPP1CB-201ENST00000296122 C9orf84Q5VXU9 1444 aa18.74■□□□□ 0.59
PPP1CB-201ENST00000296122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.74■□□□□ 0.592e-7■■■□□ 17.1
PPP1CB-201ENST00000296122 PLEKHH2Q8IVE3 1493 aa18.74■□□□□ 0.59
PPP1CB-201ENST00000296122 ABCC10Q5T3U5 1492 aa18.73■□□□□ 0.59
PPP1CB-201ENST00000296122 ADCY10Q96PN6 1610 aa18.72■□□□□ 0.59
PPP1CB-201ENST00000296122 ANKRD50Q9ULJ7 1429 aa18.72■□□□□ 0.59
PPP1CB-201ENST00000296122 DNMT1P26358 1616 aaKnown RBP18.72■□□□□ 0.59
PPP1CB-201ENST00000296122 KIF15Q9NS87 1388 aa18.72■□□□□ 0.59
PPP1CB-201ENST00000296122 CYB5RLQ6IPT4 315 aa18.71■□□□□ 0.59
PPP1CB-201ENST00000296122 NCOA1Q15788 1441 aa18.71■□□□□ 0.59
PPP1CB-201ENST00000296122 NUP155O75694 1391 aa18.71■□□□□ 0.58
PPP1CB-201ENST00000296122 FOXD1Q16676 465 aa18.7■□□□□ 0.58
PPP1CB-201ENST00000296122 CCDC141Q6ZP82 1450 aa18.69■□□□□ 0.58
PPP1CB-201ENST00000296122 KDM5BQ9UGL1 1544 aa18.69■□□□□ 0.58
PPP1CB-201ENST00000296122 MAPKBP1O60336 1514 aa18.69■□□□□ 0.58
PPP1CB-201ENST00000296122 PKD2Q13563 968 aa18.68■□□□□ 0.58
PPP1CB-201ENST00000296122 SPAG9O60271 1321 aaKnown RBP18.68■□□□□ 0.58
PPP1CB-201ENST00000296122 PPP1R15AO75807 674 aaPredicted RBP18.67■□□□□ 0.58
PPP1CB-201ENST00000296122 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
PPP1CB-201ENST00000296122 PLCH2O75038 1416 aa18.65■□□□□ 0.58
PPP1CB-201ENST00000296122 ZNF326Q5BKZ1 582 aaKnown RBP18.63■□□□□ 0.57
PPP1CB-201ENST00000296122 ZCCHC11Q5TAX3 1644 aaKnown RBP18.62■□□□□ 0.57
PPP1CB-201ENST00000296122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.62■□□□□ 0.571e-15■■□□□ 13.7
PPP1CB-201ENST00000296122 ASXL2Q76L83 1435 aa18.62■□□□□ 0.57
PPP1CB-201ENST00000296122 SHANK2Q9UPX8 1470 aa18.62■□□□□ 0.57
PPP1CB-201ENST00000296122 GCC2Q8IWJ2 1684 aa18.61■□□□□ 0.57
PPP1CB-201ENST00000296122 CDC42BPAQ5VT25 1732 aa18.6■□□□□ 0.57
PPP1CB-201ENST00000296122 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
PPP1CB-201ENST00000296122 ADGRL2O95490 1459 aa18.59■□□□□ 0.57
PPP1CB-201ENST00000296122 SYCP2Q9BX26 1530 aa18.59■□□□□ 0.57
PPP1CB-201ENST00000296122 AFAP1Q8N556 730 aa18.58■□□□□ 0.57
PPP1CB-201ENST00000296122 TTC37Q6PGP7 1564 aa18.57■□□□□ 0.56
PPP1CB-201ENST00000296122 PREX2Q70Z35 1606 aa18.57■□□□□ 0.56
PPP1CB-201ENST00000296122 CENPBP07199 599 aaPredicted RBP18.55■□□□□ 0.56
PPP1CB-201ENST00000296122 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
PPP1CB-201ENST00000296122 MYO5CQ9NQX4 1742 aa18.55■□□□□ 0.56
PPP1CB-201ENST00000296122 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
PPP1CB-201ENST00000296122 FANCAO15360 1455 aa18.54■□□□□ 0.56
PPP1CB-201ENST00000296122 MBD5Q9P267 1494 aa18.54■□□□□ 0.56
PPP1CB-201ENST00000296122 ADGBQ8N7X0 1667 aa18.52■□□□□ 0.56
PPP1CB-201ENST00000296122 HIRIP3Q9BW71 556 aaPredicted RBP18.52■□□□□ 0.56
PPP1CB-201ENST00000296122 SCAPERQ9BY12 1400 aa18.52■□□□□ 0.56
PPP1CB-201ENST00000296122 SAMD9LQ8IVG5 1584 aa18.52■□□□□ 0.56
PPP1CB-201ENST00000296122 CD109Q6YHK3 1445 aa18.51■□□□□ 0.55
PPP1CB-201ENST00000296122 EIF4G2P78344 907 aaKnown RBP eCLIP18.51■□□□□ 0.55
PPP1CB-201ENST00000296122 KANK1Q14678 1352 aa18.51■□□□□ 0.55
PPP1CB-201ENST00000296122 ADGRL1O94910 1474 aa18.49■□□□□ 0.55
PPP1CB-201ENST00000296122 ANKRD30BQ9BXX2 1392 aa18.49■□□□□ 0.55
PPP1CB-201ENST00000296122 YTHDC1Q96MU7 727 aaKnown RBP18.49■□□□□ 0.55
PPP1CB-201ENST00000296122 KDM6BO15054 1643 aa18.49■□□□□ 0.55
PPP1CB-201ENST00000296122 KIF3BO15066 747 aa18.49■□□□□ 0.55
PPP1CB-201ENST00000296122 KDM2AQ9Y2K7 1162 aa18.49■□□□□ 0.55
PPP1CB-201ENST00000296122 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
PPP1CB-201ENST00000296122 CDC42BPBQ9Y5S2 1711 aa18.47■□□□□ 0.55
PPP1CB-201ENST00000296122 TRAPPC8Q9Y2L5 1435 aa18.46■□□□□ 0.55
PPP1CB-201ENST00000296122 MIER1Q8N108 512 aa18.46■□□□□ 0.55
PPP1CB-201ENST00000296122 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
PPP1CB-201ENST00000296122 RGL3Q3MIN7 710 aa18.45■□□□□ 0.54
PPP1CB-201ENST00000296122 CROCC2H7BZ55 1655 aa18.43■□□□□ 0.54
PPP1CB-201ENST00000296122 POLR3GLQ9BT43 218 aa18.43■□□□□ 0.54
PPP1CB-201ENST00000296122 CCDC144AA2RUR9 1427 aa18.42■□□□□ 0.54
PPP1CB-201ENST00000296122 PZPP20742 1482 aa18.42■□□□□ 0.54
PPP1CB-201ENST00000296122 DUOX2Q9NRD8 1548 aa18.41■□□□□ 0.54
PPP1CB-201ENST00000296122 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
PPP1CB-201ENST00000296122 ARAP3Q8WWN8 1544 aa18.41■□□□□ 0.54
PPP1CB-201ENST00000296122 RPRD2Q5VT52 1461 aaKnown RBP18.4■□□□□ 0.54
PPP1CB-201ENST00000296122 ANP32CO43423 234 aa18.4■□□□□ 0.54
PPP1CB-201ENST00000296122 ABCC1P33527 1531 aa18.4■□□□□ 0.54
PPP1CB-201ENST00000296122 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
PPP1CB-201ENST00000296122 ERBINQ96RT1 1412 aa18.39■□□□□ 0.53
PPP1CB-201ENST00000296122 GGT6Q6P531 493 aa18.38■□□□□ 0.53
PPP1CB-201ENST00000296122 HSPA5P11021 654 aaKnown RBP18.37■□□□□ 0.53
PPP1CB-201ENST00000296122 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
PPP1CB-201ENST00000296122 CARD11Q9BXL7 1154 aa18.34■□□□□ 0.53
PPP1CB-201ENST00000296122 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
PPP1CB-201ENST00000296122 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
PPP1CB-201ENST00000296122 ZNF518AQ6AHZ1 1483 aa18.34■□□□□ 0.53
PPP1CB-201ENST00000296122 CHGAP10645 457 aaKnown RBP18.33■□□□□ 0.53
PPP1CB-201ENST00000296122 RAPGEF3O95398 923 aa18.33■□□□□ 0.53
PPP1CB-201ENST00000296122 FAM135AQ9P2D6 1515 aa18.32■□□□□ 0.52
PPP1CB-201ENST00000296122 DHX29Q7Z478 1369 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms