RNA–Protein interactions for RNA: ENST00000293373.10

NCKAP1L-201, Transcript of NCK associated protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1L, Length 9,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-201ENST00000293373 HIRIP3Q9BW71 556 aaPredicted RBP10.35□□□□□ -0.75
NCKAP1L-201ENST00000293373 KIF21BO75037 1637 aa10.35□□□□□ -0.75
NCKAP1L-201ENST00000293373 CASKIN1Q8WXD9 1431 aa10.34□□□□□ -0.75
NCKAP1L-201ENST00000293373 ROCK2O75116 1388 aaKnown RBP10.34□□□□□ -0.75
NCKAP1L-201ENST00000293373 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
NCKAP1L-201ENST00000293373 CYB5RLQ6IPT4 315 aa10.34□□□□□ -0.75
NCKAP1L-201ENST00000293373 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
NCKAP1L-201ENST00000293373 MYOM3Q5VTT5 1437 aa10.34□□□□□ -0.75
NCKAP1L-201ENST00000293373 PRG4Q92954 1404 aaPredicted RBP10.34□□□□□ -0.75
NCKAP1L-201ENST00000293373 LMOD2Q6P5Q4 547 aa10.34□□□□□ -0.75
NCKAP1L-201ENST00000293373 HDGFL2Q7Z4V5 671 aaPredicted RBP10.34□□□□□ -0.75
NCKAP1L-201ENST00000293373 SALL2Q9Y467 1007 aaPredicted RBP10.33□□□□□ -0.76
NCKAP1L-201ENST00000293373 SYNJ2O15056 1496 aa10.33□□□□□ -0.76
NCKAP1L-201ENST00000293373 PPM1GO15355 546 aaPredicted RBP10.32□□□□□ -0.76
NCKAP1L-201ENST00000293373 FYCO1Q9BQS8 1478 aa10.32□□□□□ -0.76
NCKAP1L-201ENST00000293373 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
NCKAP1L-201ENST00000293373 PLEKHG5O94827 1062 aa10.31□□□□□ -0.76
NCKAP1L-201ENST00000293373 FKBP8Q14318 412 aa10.31□□□□□ -0.76
NCKAP1L-201ENST00000293373 SNAPC4Q5SXM2 1469 aa10.31□□□□□ -0.76
NCKAP1L-201ENST00000293373 CCDC144AA2RUR9 1427 aa10.31□□□□□ -0.76
NCKAP1L-201ENST00000293373 CHMP4BQ9H444 224 aaKnown RBP10.3□□□□□ -0.76
NCKAP1L-201ENST00000293373 CCDC136Q96JN2 1154 aa10.29□□□□□ -0.76
NCKAP1L-201ENST00000293373 KTN1Q86UP2 1357 aaKnown RBP10.29□□□□□ -0.76
NCKAP1L-201ENST00000293373 PEG3Q9GZU2 1588 aa10.29□□□□□ -0.76
NCKAP1L-201ENST00000293373 ABCA10Q8WWZ4 1543 aa10.29□□□□□ -0.76
NCKAP1L-201ENST00000293373 MORC1Q86VD1 984 aa10.29□□□□□ -0.76
NCKAP1L-201ENST00000293373 FAM69CQ0P6D2 419 aa10.28□□□□□ -0.76
NCKAP1L-201ENST00000293373 MIER1Q8N108 512 aa10.28□□□□□ -0.76
NCKAP1L-201ENST00000293373 PLEKHH2Q8IVE3 1493 aa10.27□□□□□ -0.77
NCKAP1L-201ENST00000293373 EIF5BO60841 1220 aaKnown RBP10.27□□□□□ -0.77
NCKAP1L-201ENST00000293373 FGD6Q6ZV73 1430 aa10.27□□□□□ -0.77
NCKAP1L-201ENST00000293373 HSP90AA1P07900 732 aaKnown RBP10.27□□□□□ -0.77
NCKAP1L-201ENST00000293373 HSPA5P11021 654 aaKnown RBP10.27□□□□□ -0.77
NCKAP1L-201ENST00000293373 MS4A1P11836 297 aa10.26□□□□□ -0.77
NCKAP1L-201ENST00000293373 CC2D1BQ5T0F9 858 aaKnown RBP10.26□□□□□ -0.77
NCKAP1L-201ENST00000293373 TERF2IPQ9NYB0 399 aa10.25□□□□□ -0.77
NCKAP1L-201ENST00000293373 STK26Q9P289 416 aa10.25□□□□□ -0.77
NCKAP1L-201ENST00000293373 HECW1Q76N89 1606 aa10.25□□□□□ -0.77
NCKAP1L-201ENST00000293373 FOXD1Q16676 465 aa10.25□□□□□ -0.77
NCKAP1L-201ENST00000293373 SAFB2Q14151 953 aaKnown RBP eCLIP10.24□□□□□ -0.77
NCKAP1L-201ENST00000293373 KIAA0586Q9BVV6 1533 aa10.24□□□□□ -0.77
NCKAP1L-201ENST00000293373 EHBP1L1Q8N3D4 1523 aa10.24□□□□□ -0.77
NCKAP1L-201ENST00000293373 NCOA2Q15596 1464 aa10.24□□□□□ -0.77
NCKAP1L-201ENST00000293373 VGFO15240 615 aaPredicted RBP10.24□□□□□ -0.77
NCKAP1L-201ENST00000293373 RALBP1Q15311 655 aa10.24□□□□□ -0.77
NCKAP1L-201ENST00000293373 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
NCKAP1L-201ENST00000293373 ARHGAP5Q13017 1502 aa10.23□□□□□ -0.77
NCKAP1L-201ENST00000293373 MAGI1Q96QZ7 1491 aaPredicted RBP10.23□□□□□ -0.77
NCKAP1L-201ENST00000293373 LRRC9Q6ZRR7 1453 aa10.23□□□□□ -0.77
NCKAP1L-201ENST00000293373 FTSJ3Q8IY81 847 aaKnown RBP10.23□□□□□ -0.77
NCKAP1L-201ENST00000293373 U2SURPO15042 1029 aaKnown RBP10.23□□□□□ -0.77
NCKAP1L-201ENST00000293373 TNNT2P45379 298 aaPredicted RBP10.23□□□□□ -0.77
NCKAP1L-201ENST00000293373 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.22□□□□□ -0.77
NCKAP1L-201ENST00000293373 STAC3Q96MF2 364 aa10.22□□□□□ -0.77
NCKAP1L-201ENST00000293373 KIF15Q9NS87 1388 aa10.22□□□□□ -0.77
NCKAP1L-201ENST00000293373 CCER2I3L3R5 266 aa10.21□□□□□ -0.77
NCKAP1L-201ENST00000293373 PRDM2Q13029 1718 aa10.21□□□□□ -0.77
NCKAP1L-201ENST00000293373 CALD1Q05682 793 aaKnown RBP10.21□□□□□ -0.78
NCKAP1L-201ENST00000293373 CUL7Q14999 1698 aa10.2□□□□□ -0.78
NCKAP1L-201ENST00000293373 CASC1Q6TDU7 716 aa10.19□□□□□ -0.78
NCKAP1L-201ENST00000293373 CHMP4AQ9BY43 222 aa10.19□□□□□ -0.78
NCKAP1L-201ENST00000293373 NEUROD2Q15784 382 aa10.19□□□□□ -0.78
NCKAP1L-201ENST00000293373 L3MBTL2Q969R5 705 aa10.19□□□□□ -0.78
NCKAP1L-201ENST00000293373 LAS1LQ9Y4W2 734 aaKnown RBP10.18□□□□□ -0.78
NCKAP1L-201ENST00000293373 RTF1Q92541 710 aaKnown RBP10.18□□□□□ -0.78
NCKAP1L-201ENST00000293373 MIA2Q96PC5 1412 aa10.18□□□□□ -0.78
NCKAP1L-201ENST00000293373 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
NCKAP1L-201ENST00000293373 ARXQ96QS3 562 aa10.18□□□□□ -0.78
NCKAP1L-201ENST00000293373 ANKRD50Q9ULJ7 1429 aa10.17□□□□□ -0.78
NCKAP1L-201ENST00000293373 CSB-PGBD3P0DP91 1061 aa10.17□□□□□ -0.78
NCKAP1L-201ENST00000293373 TROQ12816 1431 aaPredicted RBP10.17□□□□□ -0.78
NCKAP1L-201ENST00000293373 IQGAP2Q13576 1575 aa10.16□□□□□ -0.78
NCKAP1L-201ENST00000293373 NPHP1O15259 732 aa10.16□□□□□ -0.78
NCKAP1L-201ENST00000293373 PHLDB1Q86UU1 1377 aa10.15□□□□□ -0.78
NCKAP1L-201ENST00000293373 GRIN2AQ12879 1464 aa10.15□□□□□ -0.78
NCKAP1L-201ENST00000293373 NGDNQ8NEJ9 315 aaKnown RBP10.15□□□□□ -0.78
NCKAP1L-201ENST00000293373 ARAP1Q96P48 1450 aa10.15□□□□□ -0.79
NCKAP1L-201ENST00000293373 DHX57Q6P158 1386 aaKnown RBP10.15□□□□□ -0.79
NCKAP1L-201ENST00000293373 EVC2Q86UK5 1308 aa10.14□□□□□ -0.79
NCKAP1L-201ENST00000293373 ANP32BQ92688 251 aaKnown RBP10.14□□□□□ -0.79
NCKAP1L-201ENST00000293373 NUTM2DQ5VT03 806 aaPredicted RBP10.14□□□□□ -0.79
NCKAP1L-201ENST00000293373 SOX12O15370 315 aa10.14□□□□□ -0.79
NCKAP1L-201ENST00000293373 POGZQ7Z3K3 1410 aa10.14□□□□□ -0.79
NCKAP1L-201ENST00000293373 URB2Q14146 1524 aaKnown RBP10.12□□□□□ -0.79
NCKAP1L-201ENST00000293373 DNAJC5BQ9UF47 199 aa10.11□□□□□ -0.79
NCKAP1L-201ENST00000293373 LMOD3Q0VAK6 560 aa10.11□□□□□ -0.79
NCKAP1L-201ENST00000293373 RRBP1Q9P2E9 1410 aaKnown RBP10.11□□□□□ -0.79
NCKAP1L-201ENST00000293373 U2AF1L5P0DN76 240 aaPredicted RBP10.1□□□□□ -0.79
NCKAP1L-201ENST00000293373 U2AF1Q01081 240 aaKnown RBP eCLIP10.1□□□□□ -0.79
NCKAP1L-201ENST00000293373 BECN1Q14457 450 aa10.1□□□□□ -0.79
NCKAP1L-201ENST00000293373 C9orf84Q5VXU9 1444 aa10.1□□□□□ -0.79
NCKAP1L-201ENST00000293373 CGNL1Q0VF96 1302 aa10.1□□□□□ -0.79
NCKAP1L-201ENST00000293373 IPO8O15397 1037 aaKnown RBP10.1□□□□□ -0.79
NCKAP1L-201ENST00000293373 OS9Q13438 667 aaPredicted RBP10.1□□□□□ -0.79
NCKAP1L-201ENST00000293373 FRAT1Q92837 279 aaPredicted RBP10.1□□□□□ -0.79
NCKAP1L-201ENST00000293373 DDRGK1Q96HY6 314 aa10.09□□□□□ -0.79
NCKAP1L-201ENST00000293373 ZNF644Q9H582 1327 aaPredicted RBP10.09□□□□□ -0.79
NCKAP1L-201ENST00000293373 HFM1A2PYH4 1435 aa10.09□□□□□ -0.79
NCKAP1L-201ENST00000293373 TIAM1Q13009 1591 aa10.09□□□□□ -0.79
NCKAP1L-201ENST00000293373 USP47Q96K76 1375 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms