RNA–Protein interactions for RNA: ENST00000290776.12

CPNE2-201, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-201ENST00000290776 AKNAQ7Z591 1439 aa29.1■■■□□ 2.25
CPNE2-201ENST00000290776 NCOA1Q15788 1441 aa29.08■■■□□ 2.25
CPNE2-201ENST00000290776 IQGAP2Q13576 1575 aa29.08■■■□□ 2.25
CPNE2-201ENST00000290776 MIA2Q96PC5 1412 aa29.07■■■□□ 2.24
CPNE2-201ENST00000290776 TARBP1Q13395 1621 aaKnown RBP29.06■■■□□ 2.24
CPNE2-201ENST00000290776 ZNF644Q9H582 1327 aaPredicted RBP29.05■■■□□ 2.24
CPNE2-201ENST00000290776 SLC4A1APQ9BWU0 796 aaKnown RBP29.03■■■□□ 2.24
CPNE2-201ENST00000290776 PPP4R2Q9NY27 417 aa29.03■■■□□ 2.24
CPNE2-201ENST00000290776 ANKRD30BQ9BXX2 1392 aa29.02■■■□□ 2.24
CPNE2-201ENST00000290776 B4GALNT3Q6L9W6 998 aa29.02■■■□□ 2.24
CPNE2-201ENST00000290776 PBRM1Q86U86 1689 aa29.01■■■□□ 2.23
CPNE2-201ENST00000290776 KIF7Q2M1P5 1343 aa29.01■■■□□ 2.23
CPNE2-201ENST00000290776 WDR62O43379 1518 aa29.01■■■□□ 2.23
CPNE2-201ENST00000290776 DAPK1P53355 1430 aa29■■■□□ 2.23
CPNE2-201ENST00000290776 RPRD2Q5VT52 1461 aaKnown RBP28.99■■■□□ 2.23
CPNE2-201ENST00000290776 BCL11AQ9H165 835 aa28.98■■■□□ 2.23
CPNE2-201ENST00000290776 FANCIQ9NVI1 1328 aa28.98■■■□□ 2.23
CPNE2-201ENST00000290776 POLR3GLQ9BT43 218 aa28.98■■■□□ 2.23
CPNE2-201ENST00000290776 TEX14Q8IWB6 1497 aa28.97■■■□□ 2.23
CPNE2-201ENST00000290776 ERICH6Q7L0X2 663 aa28.97■■■□□ 2.23
CPNE2-201ENST00000290776 ZBED9Q6R2W3 1325 aa28.96■■■□□ 2.23
CPNE2-201ENST00000290776 ABCC5O15440 1437 aa28.94■■■□□ 2.22
CPNE2-201ENST00000290776 ZNF326Q5BKZ1 582 aaKnown RBP28.94■■■□□ 2.22
CPNE2-201ENST00000290776 ERICH6BQ5W0A0 696 aa28.92■■■□□ 2.22
CPNE2-201ENST00000290776 ADAMTS12P58397 1594 aa28.92■■■□□ 2.22
CPNE2-201ENST00000290776 SENP3-EIF4A1A0A087X0R7 540 aa28.9■■■□□ 2.22
CPNE2-201ENST00000290776 ROCK1Q13464 1354 aa28.89■■■□□ 2.22
CPNE2-201ENST00000290776 SPATA31E1Q6ZUB1 1445 aa28.88■■■□□ 2.21
CPNE2-201ENST00000290776 DNMT1P26358 1616 aaKnown RBP28.88■■■□□ 2.21
CPNE2-201ENST00000290776 ZNF777Q9ULD5 760 aaPredicted RBP28.82■■■□□ 2.2
CPNE2-201ENST00000290776 POLR1AO95602 1720 aaPredicted RBP28.8■■■□□ 2.2
CPNE2-201ENST00000290776 NUP153P49790 1475 aaKnown RBP28.8■■■□□ 2.2
CPNE2-201ENST00000290776 PZPP20742 1482 aa28.76■■■□□ 2.19
CPNE2-201ENST00000290776 CFDP1Q9UEE9 299 aaPredicted RBP28.76■■■□□ 2.19
CPNE2-201ENST00000290776 USP47Q96K76 1375 aa28.75■■■□□ 2.19
CPNE2-201ENST00000290776 KIAA0556O60303 1618 aa28.75■■■□□ 2.19
CPNE2-201ENST00000290776 DISP1Q96F81 1524 aa28.74■■■□□ 2.19
CPNE2-201ENST00000290776 PRG4Q92954 1404 aaPredicted RBP28.74■■■□□ 2.19
CPNE2-201ENST00000290776 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
CPNE2-201ENST00000290776 DHX29Q7Z478 1369 aaKnown RBP28.73■■■□□ 2.19
CPNE2-201ENST00000290776 PKD2Q13563 968 aa28.71■■■□□ 2.19
CPNE2-201ENST00000290776 RAPGEF6Q8TEU7 1601 aa28.71■■■□□ 2.19
CPNE2-201ENST00000290776 BCORL1Q5H9F3 1711 aa28.71■■■□□ 2.19
CPNE2-201ENST00000290776 CAMSAP2Q08AD1 1489 aa28.71■■■□□ 2.19
CPNE2-201ENST00000290776 KIAA0586Q9BVV6 1533 aa28.66■■■□□ 2.18
CPNE2-201ENST00000290776 SMG6Q86US8 1419 aaKnown RBP28.66■■■□□ 2.18
CPNE2-201ENST00000290776 KIAA1107Q9UPP5 1409 aa28.65■■■□□ 2.18
CPNE2-201ENST00000290776 NUDCQ9Y266 331 aa28.65■■■□□ 2.18
CPNE2-201ENST00000290776 MRC2Q9UBG0 1479 aa28.64■■■□□ 2.18
CPNE2-201ENST00000290776 MBD5Q9P267 1494 aa28.64■■■□□ 2.18
CPNE2-201ENST00000290776 CCDC136Q96JN2 1154 aa28.61■■■□□ 2.17
CPNE2-201ENST00000290776 TROQ12816 1431 aaPredicted RBP28.61■■■□□ 2.17
CPNE2-201ENST00000290776 TMC1Q8TDI8 760 aa28.59■■■□□ 2.17
CPNE2-201ENST00000290776 PLB1Q6P1J6 1458 aa28.59■■■□□ 2.17
CPNE2-201ENST00000290776 KIF14Q15058 1648 aa28.59■■■□□ 2.17
CPNE2-201ENST00000290776 ADGBQ8N7X0 1667 aa28.58■■■□□ 2.17
CPNE2-201ENST00000290776 GPATCH8Q9UKJ3 1502 aaKnown RBP28.58■■■□□ 2.17
CPNE2-201ENST00000290776 KDM2AQ9Y2K7 1162 aa28.58■■■□□ 2.17
CPNE2-201ENST00000290776 KDM5CP41229 1560 aa28.57■■■□□ 2.16
CPNE2-201ENST00000290776 CARD11Q9BXL7 1154 aa28.56■■■□□ 2.16
CPNE2-201ENST00000290776 ITSN2Q9NZM3 1697 aa28.55■■■□□ 2.16
CPNE2-201ENST00000290776 ANKRD30AQ9BXX3 1397 aa28.55■■■□□ 2.16
CPNE2-201ENST00000290776 PNISRQ8TF01 805 aaKnown RBP28.54■■■□□ 2.16
CPNE2-201ENST00000290776 GRIN2AQ12879 1464 aa28.54■■■□□ 2.16
CPNE2-201ENST00000290776 ANKRD50Q9ULJ7 1429 aa28.53■■■□□ 2.16
CPNE2-201ENST00000290776 IFT140Q96RY7 1462 aa28.52■■■□□ 2.16
CPNE2-201ENST00000290776 FBLN2P98095 1184 aa28.52■■■□□ 2.16
CPNE2-201ENST00000290776 NUP155O75694 1391 aa28.51■■■□□ 2.16
CPNE2-201ENST00000290776 NOP58Q9Y2X3 529 aaKnown RBP28.51■■■□□ 2.15
CPNE2-201ENST00000290776 PAK3O75914 559 aaPredicted RBP28.5■■■□□ 2.15
CPNE2-201ENST00000290776 CROCC2H7BZ55 1655 aa28.49■■■□□ 2.15
CPNE2-201ENST00000290776 NBR1Q14596 966 aa28.49■■■□□ 2.15
CPNE2-201ENST00000290776 ST20-MTHFSA0A0A6YYL1 179 aa28.48■■■□□ 2.15
CPNE2-201ENST00000290776 ADGRL2O95490 1459 aa28.48■■■□□ 2.15
CPNE2-201ENST00000290776 RNF123Q5XPI4 1314 aa28.48■■■□□ 2.15
CPNE2-201ENST00000290776 SALL2Q9Y467 1007 aaPredicted RBP28.46■■■□□ 2.15
CPNE2-201ENST00000290776 ARID4BQ4LE39 1312 aaPredicted RBP28.45■■■□□ 2.14
CPNE2-201ENST00000290776 CHMP7Q8WUX9 453 aaPredicted RBP28.45■■■□□ 2.14
CPNE2-201ENST00000290776 DCAF11Q8TEB1 546 aa28.44■■■□□ 2.14
CPNE2-201ENST00000290776 RALGAPBQ86X10 1494 aa28.44■■■□□ 2.14
CPNE2-201ENST00000290776 ROCK2O75116 1388 aaKnown RBP28.43■■■□□ 2.14
CPNE2-201ENST00000290776 EIF4G3O43432 1585 aaKnown RBP28.42■■■□□ 2.14
CPNE2-201ENST00000290776 KIF15Q9NS87 1388 aa28.42■■■□□ 2.14
CPNE2-201ENST00000290776 UHRF1BP1Q6BDS2 1440 aa28.39■■■□□ 2.14
CPNE2-201ENST00000290776 C9orf84Q5VXU9 1444 aa28.39■■■□□ 2.13
CPNE2-201ENST00000290776 DEKP35659 375 aaKnown RBP28.39■■■□□ 2.13
CPNE2-201ENST00000290776 ADCY10Q96PN6 1610 aa28.38■■■□□ 2.13
CPNE2-201ENST00000290776 ANP32AP39687 249 aaKnown RBP28.38■■■□□ 2.13
CPNE2-201ENST00000290776 CEP170Q5SW79 1584 aa28.36■■■□□ 2.13
CPNE2-201ENST00000290776 MYBBP1AQ9BQG0 1328 aaKnown RBP28.36■■■□□ 2.13
CPNE2-201ENST00000290776 PLEKHD1A6NEE1 506 aa28.36■■■□□ 2.13
CPNE2-201ENST00000290776 TSPY4P0CV99 314 aa28.35■■■□□ 2.13
CPNE2-201ENST00000290776 TSPY10P0CW01 314 aa28.35■■■□□ 2.13
CPNE2-201ENST00000290776 HNRNPMP52272 730 aaKnown RBP eCLIP28.34■■■□□ 2.13
CPNE2-201ENST00000290776 CDC42BPAQ5VT25 1732 aa28.33■■■□□ 2.13
CPNE2-201ENST00000290776 LRPPRCP42704 1394 aaKnown RBP28.32■■■□□ 2.12
CPNE2-201ENST00000290776 JPH4Q96JJ6 628 aa28.32■■■□□ 2.12
CPNE2-201ENST00000290776 BRD4O60885 1362 aaPredicted RBP28.31■■■□□ 2.12
CPNE2-201ENST00000290776 ARHGEF12Q9NZN5 1544 aa28.3■■■□□ 2.12
CPNE2-201ENST00000290776 EXOC6Q8TAG9 804 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms