RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 TMC1Q8TDI8 760 aa14.68□□□□□ -0.06
ACTC1-201ENST00000290378 SLC4A3P48751 1232 aa14.67□□□□□ -0.06
ACTC1-201ENST00000290378 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
ACTC1-201ENST00000290378 GLIPR1L2Q4G1C9 344 aa14.66□□□□□ -0.06
ACTC1-201ENST00000290378 ARID4BQ4LE39 1312 aaPredicted RBP14.66□□□□□ -0.06
ACTC1-201ENST00000290378 IPO9Q96P70 1041 aaKnown RBP14.66□□□□□ -0.06
ACTC1-201ENST00000290378 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
ACTC1-201ENST00000290378 PPP1R15AO75807 674 aaPredicted RBP14.65□□□□□ -0.06
ACTC1-201ENST00000290378 BRPF3Q9ULD4 1205 aa14.64□□□□□ -0.07
ACTC1-201ENST00000290378 PTPRGP23470 1445 aa14.64□□□□□ -0.07
ACTC1-201ENST00000290378 FGD6Q6ZV73 1430 aa14.63□□□□□ -0.07
ACTC1-201ENST00000290378 CASKIN1Q8WXD9 1431 aa14.63□□□□□ -0.07
ACTC1-201ENST00000290378 DCAF11Q8TEB1 546 aa14.63□□□□□ -0.07
ACTC1-201ENST00000290378 L3MBTL2Q969R5 705 aa14.62□□□□□ -0.07
ACTC1-201ENST00000290378 HSPA5P11021 654 aaKnown RBP14.61□□□□□ -0.07
ACTC1-201ENST00000290378 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
ACTC1-201ENST00000290378 CCDC184Q52MB2 194 aa14.61□□□□□ -0.07
ACTC1-201ENST00000290378 CARD11Q9BXL7 1154 aa14.6□□□□□ -0.07
ACTC1-201ENST00000290378 CCDC18Q5T9S5 1454 aa14.6□□□□□ -0.07
ACTC1-201ENST00000290378 NUP155O75694 1391 aa14.6□□□□□ -0.07
ACTC1-201ENST00000290378 NCOA2Q15596 1464 aa14.6□□□□□ -0.07
ACTC1-201ENST00000290378 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
ACTC1-201ENST00000290378 IFT140Q96RY7 1462 aa14.58□□□□□ -0.07
ACTC1-201ENST00000290378 STAG3Q9UJ98 1225 aa14.58□□□□□ -0.08
ACTC1-201ENST00000290378 PKNOX2Q96KN3 472 aa14.58□□□□□ -0.08
ACTC1-201ENST00000290378 MYOM3Q5VTT5 1437 aa14.57□□□□□ -0.08
ACTC1-201ENST00000290378 RRBP1Q9P2E9 1410 aaKnown RBP14.57□□□□□ -0.08
ACTC1-201ENST00000290378 CDK13Q14004 1512 aaKnown RBP14.56□□□□□ -0.08
ACTC1-201ENST00000290378 TIAM1Q13009 1591 aa14.56□□□□□ -0.08
ACTC1-201ENST00000290378 GGT6Q6P531 493 aa14.56□□□□□ -0.08
ACTC1-201ENST00000290378 PRG4Q92954 1404 aaPredicted RBP14.56□□□□□ -0.08
ACTC1-201ENST00000290378 NAP1L5Q96NT1 182 aaPredicted RBP14.56□□□□□ -0.08
ACTC1-201ENST00000290378 PCF11O94913 1555 aaKnown RBP14.55□□□□□ -0.08
ACTC1-201ENST00000290378 RGS3P49796 1198 aa14.55□□□□□ -0.08
ACTC1-201ENST00000290378 FYCO1Q9BQS8 1478 aa14.54□□□□□ -0.08
ACTC1-201ENST00000290378 PPM1GO15355 546 aaPredicted RBP14.53□□□□□ -0.08
ACTC1-201ENST00000290378 CYB5RLQ6IPT4 315 aa14.53□□□□□ -0.08
ACTC1-201ENST00000290378 EFCAB2Q5VUJ9 269 aa14.52□□□□□ -0.08
ACTC1-201ENST00000290378 UBE2Q2Q8WVN8 375 aa14.52□□□□□ -0.08
ACTC1-201ENST00000290378 ESF1Q9H501 851 aaKnown RBP14.52□□□□□ -0.08
ACTC1-201ENST00000290378 MLECQ14165 292 aa14.52□□□□□ -0.08
ACTC1-201ENST00000290378 ANKRD30AQ9BXX3 1397 aa14.51□□□□□ -0.09
ACTC1-201ENST00000290378 PLB1Q6P1J6 1458 aa14.49□□□□□ -0.09
ACTC1-201ENST00000290378 KIF3BO15066 747 aa14.49□□□□□ -0.09
ACTC1-201ENST00000290378 EFCAB5A4FU69 1503 aa14.47□□□□□ -0.09
ACTC1-201ENST00000290378 SKAP1Q86WV1 359 aa14.47□□□□□ -0.09
ACTC1-201ENST00000290378 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.09
ACTC1-201ENST00000290378 SPRYD3Q8NCJ5 442 aa14.46□□□□□ -0.1
ACTC1-201ENST00000290378 PLIN1O60240 522 aa14.45□□□□□ -0.1
ACTC1-201ENST00000290378 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
ACTC1-201ENST00000290378 EXOC6Q8TAG9 804 aa14.45□□□□□ -0.1
ACTC1-201ENST00000290378 NUTM2DQ5VT03 806 aaPredicted RBP14.45□□□□□ -0.1
ACTC1-201ENST00000290378 AFAP1Q8N556 730 aa14.45□□□□□ -0.1
ACTC1-201ENST00000290378 IQGAP2Q13576 1575 aa14.44□□□□□ -0.1
ACTC1-201ENST00000290378 CANXP27824 592 aaKnown RBP14.44□□□□□ -0.1
ACTC1-201ENST00000290378 KIAA0586Q9BVV6 1533 aa14.44□□□□□ -0.1
ACTC1-201ENST00000290378 PDE4AP27815 886 aa14.44□□□□□ -0.1
ACTC1-201ENST00000290378 EPRSP07814 1512 aaKnown RBP14.44□□□□□ -0.1
ACTC1-201ENST00000290378 SPAG9O60271 1321 aaKnown RBP14.43□□□□□ -0.1
ACTC1-201ENST00000290378 GRIN2AQ12879 1464 aa14.43□□□□□ -0.1
ACTC1-201ENST00000290378 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
ACTC1-201ENST00000290378 SAFB2Q14151 953 aaKnown RBP eCLIP14.42□□□□□ -0.1
ACTC1-201ENST00000290378 CC2D1BQ5T0F9 858 aaKnown RBP14.42□□□□□ -0.1
ACTC1-201ENST00000290378 CUL7Q14999 1698 aa14.42□□□□□ -0.1
ACTC1-201ENST00000290378 GZF1Q9H116 711 aaPredicted RBP14.41□□□□□ -0.1
ACTC1-201ENST00000290378 SLKQ9H2G2 1235 aaPredicted RBP14.41□□□□□ -0.1
ACTC1-201ENST00000290378 DDRGK1Q96HY6 314 aa14.41□□□□□ -0.1
ACTC1-201ENST00000290378 GSE1Q14687 1217 aa14.4□□□□□ -0.1
ACTC1-201ENST00000290378 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
ACTC1-201ENST00000290378 NUDCQ9Y266 331 aa14.4□□□□□ -0.1
ACTC1-201ENST00000290378 AKNAQ7Z591 1439 aa14.39□□□□□ -0.11
ACTC1-201ENST00000290378 ARID3AQ99856 593 aa14.38□□□□□ -0.11
ACTC1-201ENST00000290378 WASHC2AQ641Q2 1341 aa14.38□□□□□ -0.11
ACTC1-201ENST00000290378 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
ACTC1-201ENST00000290378 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
ACTC1-201ENST00000290378 UACAQ9BZF9 1416 aa14.38□□□□□ -0.11
ACTC1-201ENST00000290378 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
ACTC1-201ENST00000290378 SYNJ2O15056 1496 aa14.37□□□□□ -0.11
ACTC1-201ENST00000290378 KIF15Q9NS87 1388 aa14.37□□□□□ -0.11
ACTC1-201ENST00000290378 FRAT1Q92837 279 aaPredicted RBP14.36□□□□□ -0.11
ACTC1-201ENST00000290378 ST20-MTHFSA0A0A6YYL1 179 aa14.35□□□□□ -0.11
ACTC1-201ENST00000290378 RCAN3Q9UKA8 241 aa14.35□□□□□ -0.11
ACTC1-201ENST00000290378 TROQ12816 1431 aaPredicted RBP14.35□□□□□ -0.11
ACTC1-201ENST00000290378 PTPRKQ15262 1439 aa14.35□□□□□ -0.11
ACTC1-201ENST00000290378 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
ACTC1-201ENST00000290378 NAIPQ13075 1403 aa14.34□□□□□ -0.11
ACTC1-201ENST00000290378 ANKRD50Q9ULJ7 1429 aa14.33□□□□□ -0.11
ACTC1-201ENST00000290378 ZBED9Q6R2W3 1325 aa14.33□□□□□ -0.11
ACTC1-201ENST00000290378 EHBP1L1Q8N3D4 1523 aa14.33□□□□□ -0.12
ACTC1-201ENST00000290378 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
ACTC1-201ENST00000290378 ROCK2O75116 1388 aaKnown RBP14.33□□□□□ -0.12
ACTC1-201ENST00000290378 TCERG1O14776 1098 aaKnown RBP14.33□□□□□ -0.12
ACTC1-201ENST00000290378 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
ACTC1-201ENST00000290378 STK26Q9P289 416 aa14.32□□□□□ -0.12
ACTC1-201ENST00000290378 RSPH6AQ9H0K4 717 aa14.32□□□□□ -0.12
ACTC1-201ENST00000290378 NBPF8Q3BBV2 869 aa14.32□□□□□ -0.12
ACTC1-201ENST00000290378 PODXL2Q9NZ53 605 aa14.32□□□□□ -0.12
ACTC1-201ENST00000290378 THOC2Q8NI27 1593 aaKnown RBP14.31□□□□□ -0.12
ACTC1-201ENST00000290378 HFM1A2PYH4 1435 aa14.31□□□□□ -0.12
ACTC1-201ENST00000290378 HECW1Q76N89 1606 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms