RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 ITSN2Q9NZM3 1697 aa14.46□□□□□ -0.09
LRTOMT-201ENST00000289488 MIA2Q96PC5 1412 aa14.45□□□□□ -0.1
LRTOMT-201ENST00000289488 PTPRKQ15262 1439 aa14.45□□□□□ -0.1
LRTOMT-201ENST00000289488 MYO5CQ9NQX4 1742 aa14.44□□□□□ -0.1
LRTOMT-201ENST00000289488 PREX2Q70Z35 1606 aa14.44□□□□□ -0.1
LRTOMT-201ENST00000289488 TCOF1Q13428 1488 aaKnown RBP14.43□□□□□ -0.1
LRTOMT-201ENST00000289488 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
LRTOMT-201ENST00000289488 CHIC2Q9UKJ5 165 aa14.43□□□□□ -0.1
LRTOMT-201ENST00000289488 ARHGAP5Q13017 1502 aa14.41□□□□□ -0.1
LRTOMT-201ENST00000289488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.41□□□□□ -0.1
LRTOMT-201ENST00000289488 NEUROD1Q13562 356 aa14.41□□□□□ -0.1
LRTOMT-201ENST00000289488 MAPKBP1O60336 1514 aa14.4□□□□□ -0.1
LRTOMT-201ENST00000289488 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
LRTOMT-201ENST00000289488 ABCA9Q8IUA7 1624 aa14.4□□□□□ -0.1
LRTOMT-201ENST00000289488 HNRNPMP52272 730 aaKnown RBP eCLIP14.4□□□□□ -0.11
LRTOMT-201ENST00000289488 SAMD9LQ8IVG5 1584 aa14.39□□□□□ -0.11
LRTOMT-201ENST00000289488 PLCH2O75038 1416 aa14.39□□□□□ -0.11
LRTOMT-201ENST00000289488 ABCC5O15440 1437 aa14.37□□□□□ -0.11
LRTOMT-201ENST00000289488 DAPK1P53355 1430 aa14.36□□□□□ -0.11
LRTOMT-201ENST00000289488 DNMT1P26358 1616 aaKnown RBP14.36□□□□□ -0.11
LRTOMT-201ENST00000289488 RRP7BPQ9NSQ0 103 aa14.36□□□□□ -0.11
LRTOMT-201ENST00000289488 SYCP2Q9BX26 1530 aa14.35□□□□□ -0.11
LRTOMT-201ENST00000289488 FAM69CQ0P6D2 419 aa14.35□□□□□ -0.11
LRTOMT-201ENST00000289488 CD109Q6YHK3 1445 aa14.34□□□□□ -0.11
LRTOMT-201ENST00000289488 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
LRTOMT-201ENST00000289488 ARHGEF12Q9NZN5 1544 aa14.34□□□□□ -0.11
LRTOMT-201ENST00000289488 EFCAB2Q5VUJ9 269 aa14.33□□□□□ -0.11
LRTOMT-201ENST00000289488 FANCAO15360 1455 aa14.33□□□□□ -0.11
LRTOMT-201ENST00000289488 MBD5Q9P267 1494 aa14.33□□□□□ -0.12
LRTOMT-201ENST00000289488 GTF3C3Q9Y5Q9 886 aa14.32□□□□□ -0.12
LRTOMT-201ENST00000289488 TSPOAP1O95153 1857 aa14.32□□□□□ -0.12
LRTOMT-201ENST00000289488 DIP2BQ9P265 1576 aa14.32□□□□□ -0.12
LRTOMT-201ENST00000289488 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
LRTOMT-201ENST00000289488 CROCC2H7BZ55 1655 aa14.3□□□□□ -0.12
LRTOMT-201ENST00000289488 SETD5Q9C0A6 1442 aa14.29□□□□□ -0.12
LRTOMT-201ENST00000289488 NAIPQ13075 1403 aa14.29□□□□□ -0.12
LRTOMT-201ENST00000289488 KIF13AQ9H1H9 1805 aa14.29□□□□□ -0.12
LRTOMT-201ENST00000289488 ABCC1P33527 1531 aa14.29□□□□□ -0.12
LRTOMT-201ENST00000289488 AFAP1Q8N556 730 aa14.29□□□□□ -0.12
LRTOMT-201ENST00000289488 MAP3K4Q9Y6R4 1608 aa14.29□□□□□ -0.12
LRTOMT-201ENST00000289488 TRAPPC8Q9Y2L5 1435 aa14.28□□□□□ -0.12
LRTOMT-201ENST00000289488 ARAP3Q8WWN8 1544 aa14.28□□□□□ -0.12
LRTOMT-201ENST00000289488 CCER1Q8TC90 406 aaPredicted RBP14.28□□□□□ -0.12
LRTOMT-201ENST00000289488 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
LRTOMT-201ENST00000289488 KDM6BO15054 1643 aa14.28□□□□□ -0.12
LRTOMT-201ENST00000289488 AKNAQ7Z591 1439 aa14.27□□□□□ -0.12
LRTOMT-201ENST00000289488 CCDC141Q6ZP82 1450 aa14.27□□□□□ -0.13
LRTOMT-201ENST00000289488 ADGRL1O94910 1474 aa14.26□□□□□ -0.13
LRTOMT-201ENST00000289488 TSPY4P0CV99 314 aa14.26□□□□□ -0.13
LRTOMT-201ENST00000289488 TSPY10P0CW01 314 aa14.26□□□□□ -0.13
LRTOMT-201ENST00000289488 ARHGEF5Q12774 1597 aa14.26□□□□□ -0.13
LRTOMT-201ENST00000289488 C9orf84Q5VXU9 1444 aa14.26□□□□□ -0.13
LRTOMT-201ENST00000289488 KIAA1107Q9UPP5 1409 aa14.26□□□□□ -0.13
LRTOMT-201ENST00000289488 GLI2P10070 1586 aa14.25□□□□□ -0.13
LRTOMT-201ENST00000289488 NCOA1Q15788 1441 aa14.25□□□□□ -0.13
LRTOMT-201ENST00000289488 SCAPERQ9BY12 1400 aa14.25□□□□□ -0.13
LRTOMT-201ENST00000289488 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
LRTOMT-201ENST00000289488 PLEKHH2Q8IVE3 1493 aa14.24□□□□□ -0.13
LRTOMT-201ENST00000289488 ADGBQ8N7X0 1667 aa14.24□□□□□ -0.13
LRTOMT-201ENST00000289488 PPRC1Q5VV67 1664 aaKnown RBP14.23□□□□□ -0.13
LRTOMT-201ENST00000289488 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
LRTOMT-201ENST00000289488 ROCK1Q13464 1354 aa14.22□□□□□ -0.13
LRTOMT-201ENST00000289488 RAPGEF3O95398 923 aa14.22□□□□□ -0.13
LRTOMT-201ENST00000289488 SHANK2Q9UPX8 1470 aa14.22□□□□□ -0.13
LRTOMT-201ENST00000289488 RSPH4AQ5TD94 716 aa14.21□□□□□ -0.13
LRTOMT-201ENST00000289488 ANKRD30AQ9BXX3 1397 aa14.21□□□□□ -0.14
LRTOMT-201ENST00000289488 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
LRTOMT-201ENST00000289488 DHX57Q6P158 1386 aaKnown RBP14.2□□□□□ -0.14
LRTOMT-201ENST00000289488 KIF15Q9NS87 1388 aa14.19□□□□□ -0.14
LRTOMT-201ENST00000289488 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
LRTOMT-201ENST00000289488 SPAG9O60271 1321 aaKnown RBP14.18□□□□□ -0.14
LRTOMT-201ENST00000289488 CFAP74Q9C0B2 1584 aa14.18□□□□□ -0.14
LRTOMT-201ENST00000289488 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
LRTOMT-201ENST00000289488 NEO1Q92859 1461 aa14.17□□□□□ -0.14
LRTOMT-201ENST00000289488 ZFYVE16Q7Z3T8 1539 aa14.16□□□□□ -0.14
LRTOMT-201ENST00000289488 ANKRD50Q9ULJ7 1429 aa14.16□□□□□ -0.14
LRTOMT-201ENST00000289488 TRIM52Q96A61 297 aa14.16□□□□□ -0.14
LRTOMT-201ENST00000289488 MAST1Q9Y2H9 1570 aa14.16□□□□□ -0.14
LRTOMT-201ENST00000289488 POGZQ7Z3K3 1410 aa14.16□□□□□ -0.14
LRTOMT-201ENST00000289488 ZNF518AQ6AHZ1 1483 aa14.15□□□□□ -0.14
LRTOMT-201ENST00000289488 ATP7AQ04656 1500 aa14.14□□□□□ -0.15
LRTOMT-201ENST00000289488 INO80Q9ULG1 1556 aaPredicted RBP14.13□□□□□ -0.15
LRTOMT-201ENST00000289488 KIDINS220Q9ULH0 1771 aa14.13□□□□□ -0.15
LRTOMT-201ENST00000289488 RICTORQ6R327 1708 aa14.13□□□□□ -0.15
LRTOMT-201ENST00000289488 DENND4BO75064 1496 aaPredicted RBP14.13□□□□□ -0.15
LRTOMT-201ENST00000289488 PLXNC1O60486 1568 aa14.13□□□□□ -0.15
LRTOMT-201ENST00000289488 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
LRTOMT-201ENST00000289488 KDM5CP41229 1560 aa14.12□□□□□ -0.15
LRTOMT-201ENST00000289488 TEX14Q8IWB6 1497 aa14.11□□□□□ -0.15
LRTOMT-201ENST00000289488 FRMPD1Q5SYB0 1578 aa14.11□□□□□ -0.15
LRTOMT-201ENST00000289488 FOXD1Q16676 465 aa14.1□□□□□ -0.15
LRTOMT-201ENST00000289488 RTEL1-TNFRSF6BF6WH68 1400 aa14.1□□□□□ -0.15
LRTOMT-201ENST00000289488 HECW2Q9P2P5 1572 aa14.09□□□□□ -0.15
LRTOMT-201ENST00000289488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.16
LRTOMT-201ENST00000289488 DUOX2Q9NRD8 1548 aa14.08□□□□□ -0.16
LRTOMT-201ENST00000289488 YEATS2Q9ULM3 1422 aa14.07□□□□□ -0.16
LRTOMT-201ENST00000289488 MPHOSPH9Q99550 1183 aa14.07□□□□□ -0.16
LRTOMT-201ENST00000289488 ABCA6Q8N139 1617 aa14.07□□□□□ -0.16
LRTOMT-201ENST00000289488 MLH3Q9UHC1 1453 aa14.06□□□□□ -0.16
LRTOMT-201ENST00000289488 NUP155O75694 1391 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms