RNA–Protein interactions for RNA: ENST00000289416.9

ACSM3-201, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSM3, Length 2,845 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-201ENST00000289416 RNF39Q9H2S5 420 aa6.42□□□□□ -1.38
ACSM3-201ENST00000289416 ABCA8O94911 1581 aa6.42□□□□□ -1.38
ACSM3-201ENST00000289416 RAPGEF6Q8TEU7 1601 aa6.42□□□□□ -1.38
ACSM3-201ENST00000289416 UHRF1BP1LA0JNW5 1464 aa6.41□□□□□ -1.38
ACSM3-201ENST00000289416 FYCO1Q9BQS8 1478 aa6.41□□□□□ -1.38
ACSM3-201ENST00000289416 TMEM132AQ24JP5 1023 aa6.41□□□□□ -1.38
ACSM3-201ENST00000289416 DNAJC5Q9H3Z4 198 aa6.41□□□□□ -1.38
ACSM3-201ENST00000289416 CASKIN1Q8WXD9 1431 aa6.41□□□□□ -1.38
ACSM3-201ENST00000289416 HECW1Q76N89 1606 aa6.41□□□□□ -1.38
ACSM3-201ENST00000289416 UACAQ9BZF9 1416 aa6.41□□□□□ -1.38
ACSM3-201ENST00000289416 PCF11O94913 1555 aaKnown RBP6.4□□□□□ -1.38
ACSM3-201ENST00000289416 ABCC2Q92887 1545 aa6.4□□□□□ -1.38
ACSM3-201ENST00000289416 C1QBPQ07021 282 aaKnown RBP6.4□□□□□ -1.38
ACSM3-201ENST00000289416 PLB1Q6P1J6 1458 aa6.39□□□□□ -1.39
ACSM3-201ENST00000289416 CCDC18Q5T9S5 1454 aa6.39□□□□□ -1.39
ACSM3-201ENST00000289416 NUP153P49790 1475 aaKnown RBP6.38□□□□□ -1.39
ACSM3-201ENST00000289416 ADCY10Q96PN6 1610 aa6.38□□□□□ -1.39
ACSM3-201ENST00000289416 MAP3K1Q13233 1512 aa6.38□□□□□ -1.39
ACSM3-201ENST00000289416 TTBK1Q5TCY1 1321 aaPredicted RBP6.38□□□□□ -1.39
ACSM3-201ENST00000289416 KDM5BQ9UGL1 1544 aa6.37□□□□□ -1.39
ACSM3-201ENST00000289416 C14orf37Q86TY3 774 aa6.37□□□□□ -1.39
ACSM3-201ENST00000289416 EPRSP07814 1512 aaKnown RBP6.37□□□□□ -1.39
ACSM3-201ENST00000289416 CFAP43Q8NDM7 1665 aa6.36□□□□□ -1.39
ACSM3-201ENST00000289416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.36□□□□□ -1.39
ACSM3-201ENST00000289416 HNRNPUL2Q1KMD3 747 aaKnown RBP6.36□□□□□ -1.39
ACSM3-201ENST00000289416 CYB5RLQ6IPT4 315 aa6.35□□□□□ -1.39
ACSM3-201ENST00000289416 SPOCK2Q92563 424 aa6.35□□□□□ -1.39
ACSM3-201ENST00000289416 LRRIQ1Q96JM4 1722 aa6.35□□□□□ -1.39
ACSM3-201ENST00000289416 APLP2Q06481 763 aa6.35□□□□□ -1.39
ACSM3-201ENST00000289416 HOMEZQ8IX15 550 aa6.35□□□□□ -1.39
ACSM3-201ENST00000289416 TIAM1Q13009 1591 aa6.35□□□□□ -1.39
ACSM3-201ENST00000289416 ZCCHC11Q5TAX3 1644 aaKnown RBP6.35□□□□□ -1.39
ACSM3-201ENST00000289416 ATP10BO94823 1461 aa6.35□□□□□ -1.39
ACSM3-201ENST00000289416 ATP1B4Q9UN42 357 aaPredicted RBP6.34□□□□□ -1.39
ACSM3-201ENST00000289416 CDK11AQ9UQ88 783 aaPredicted RBP6.34□□□□□ -1.39
ACSM3-201ENST00000289416 CDK13Q14004 1512 aaKnown RBP6.34□□□□□ -1.4
ACSM3-201ENST00000289416 MAPKBP1O60336 1514 aa6.33□□□□□ -1.4
ACSM3-201ENST00000289416 EHBP1L1Q8N3D4 1523 aa6.33□□□□□ -1.4
ACSM3-201ENST00000289416 TROQ12816 1431 aaPredicted RBP6.32□□□□□ -1.4
ACSM3-201ENST00000289416 LRRC9Q6ZRR7 1453 aa6.31□□□□□ -1.4
ACSM3-201ENST00000289416 MTUS2Q5JR59 1369 aa6.31□□□□□ -1.4
ACSM3-201ENST00000289416 PLEKHD1A6NEE1 506 aa6.31□□□□□ -1.4
ACSM3-201ENST00000289416 WDR7Q9Y4E6 1490 aa6.31□□□□□ -1.4
ACSM3-201ENST00000289416 CIZ1Q9ULV3 898 aaPredicted RBP6.31□□□□□ -1.4
ACSM3-201ENST00000289416 ASXL2Q76L83 1435 aa6.3□□□□□ -1.4
ACSM3-201ENST00000289416 MAGI3Q5TCQ9 1506 aa6.3□□□□□ -1.4
ACSM3-201ENST00000289416 KIF14Q15058 1648 aa6.3□□□□□ -1.4
ACSM3-201ENST00000289416 ARID3CA6NKF2 412 aa6.3□□□□□ -1.4
ACSM3-201ENST00000289416 POLA2Q14181 598 aa6.3□□□□□ -1.4
ACSM3-201ENST00000289416 SUPT6HQ7KZ85 1726 aaKnown RBP6.29□□□□□ -1.4
ACSM3-201ENST00000289416 TRHP20396 242 aaPredicted RBP6.29□□□□□ -1.4
ACSM3-201ENST00000289416 NKX1-1Q15270 411 aaPredicted RBP6.28□□□□□ -1.4
ACSM3-201ENST00000289416 SPINK5Q9NQ38 1064 aaPredicted RBP6.28□□□□□ -1.4
ACSM3-201ENST00000289416 GLI2P10070 1586 aa6.28□□□□□ -1.4
ACSM3-201ENST00000289416 KANK4Q5T7N3 995 aaPredicted RBP6.27□□□□□ -1.41
ACSM3-201ENST00000289416 PODXL2Q9NZ53 605 aa6.27□□□□□ -1.41
ACSM3-201ENST00000289416 PLCD3Q8N3E9 789 aa6.27□□□□□ -1.41
ACSM3-201ENST00000289416 ABCA9Q8IUA7 1624 aa6.27□□□□□ -1.41
ACSM3-201ENST00000289416 NCOA2Q15596 1464 aa6.27□□□□□ -1.41
ACSM3-201ENST00000289416 ABCC10Q5T3U5 1492 aa6.27□□□□□ -1.41
ACSM3-201ENST00000289416 DIP2BQ9P265 1576 aa6.26□□□□□ -1.41
ACSM3-201ENST00000289416 RNF25Q96BH1 459 aaPredicted RBP6.26□□□□□ -1.41
ACSM3-201ENST00000289416 ITSN2Q9NZM3 1697 aa6.26□□□□□ -1.41
ACSM3-201ENST00000289416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.26□□□□□ -1.41
ACSM3-201ENST00000289416 ARAP3Q8WWN8 1544 aa6.26□□□□□ -1.41
ACSM3-201ENST00000289416 CCNB3Q8WWL7 1395 aa6.25□□□□□ -1.41
ACSM3-201ENST00000289416 TTC37Q6PGP7 1564 aa6.25□□□□□ -1.41
ACSM3-201ENST00000289416 MYO5CQ9NQX4 1742 aa6.24□□□□□ -1.41
ACSM3-201ENST00000289416 PREX2Q70Z35 1606 aa6.24□□□□□ -1.41
ACSM3-201ENST00000289416 KCNH8Q96L42 1107 aa6.24□□□□□ -1.41
ACSM3-201ENST00000289416 MAP3K4Q9Y6R4 1608 aa6.24□□□□□ -1.41
ACSM3-201ENST00000289416 MYOM3Q5VTT5 1437 aa6.24□□□□□ -1.41
ACSM3-201ENST00000289416 KIF13AQ9H1H9 1805 aa6.24□□□□□ -1.41
ACSM3-201ENST00000289416 MIA2Q96PC5 1412 aa6.23□□□□□ -1.41
ACSM3-201ENST00000289416 CDC42BPAQ5VT25 1732 aa6.23□□□□□ -1.41
ACSM3-201ENST00000289416 PLCH2O75038 1416 aa6.23□□□□□ -1.41
ACSM3-201ENST00000289416 GPATCH8Q9UKJ3 1502 aaKnown RBP6.23□□□□□ -1.41
ACSM3-201ENST00000289416 MIER1Q8N108 512 aa6.23□□□□□ -1.41
ACSM3-201ENST00000289416 CD109Q6YHK3 1445 aa6.23□□□□□ -1.41
ACSM3-201ENST00000289416 CFAP74Q9C0B2 1584 aa6.23□□□□□ -1.41
ACSM3-201ENST00000289416 PHLDB1Q86UU1 1377 aa6.22□□□□□ -1.41
ACSM3-201ENST00000289416 FAM69CQ0P6D2 419 aa6.22□□□□□ -1.41
ACSM3-201ENST00000289416 FGD6Q6ZV73 1430 aa6.22□□□□□ -1.41
ACSM3-201ENST00000289416 CDC42BPBQ9Y5S2 1711 aa6.22□□□□□ -1.41
ACSM3-201ENST00000289416 TEX14Q8IWB6 1497 aa6.21□□□□□ -1.41
ACSM3-201ENST00000289416 ARHGAP5Q13017 1502 aa6.21□□□□□ -1.42
ACSM3-201ENST00000289416 PLEKHH2Q8IVE3 1493 aa6.21□□□□□ -1.42
ACSM3-201ENST00000289416 RRBP1Q9P2E9 1410 aaKnown RBP6.21□□□□□ -1.42
ACSM3-201ENST00000289416 PPARGC1BQ86YN6 1023 aaKnown RBP6.21□□□□□ -1.42
ACSM3-201ENST00000289416 TCOF1Q13428 1488 aaKnown RBP6.21□□□□□ -1.42
ACSM3-201ENST00000289416 NEO1Q92859 1461 aa6.21□□□□□ -1.42
ACSM3-201ENST00000289416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.21□□□□□ -1.42
ACSM3-201ENST00000289416 EFCAB2Q5VUJ9 269 aa6.21□□□□□ -1.42
ACSM3-201ENST00000289416 CFDP1Q9UEE9 299 aaPredicted RBP6.2□□□□□ -1.42
ACSM3-201ENST00000289416 PTPN23Q9H3S7 1636 aa6.2□□□□□ -1.42
ACSM3-201ENST00000289416 FANCAO15360 1455 aa6.2□□□□□ -1.42
ACSM3-201ENST00000289416 PPRC1Q5VV67 1664 aaKnown RBP6.19□□□□□ -1.42
ACSM3-201ENST00000289416 BRPF1P55201 1214 aaPredicted RBP6.19□□□□□ -1.42
ACSM3-201ENST00000289416 GTPBP6O43824 516 aaPredicted RBP6.19□□□□□ -1.42
ACSM3-201ENST00000289416 CAMSAP2Q08AD1 1489 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms