RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 VPS8Q8N3P4 1428 aa32.58■■■□□ 2.81
RAB28-201ENST00000288723 RICTORQ6R327 1708 aa32.58■■■□□ 2.81
RAB28-201ENST00000288723 CDC42BPBQ9Y5S2 1711 aa32.55■■■□□ 2.8
RAB28-201ENST00000288723 PREX2Q70Z35 1606 aa32.52■■■□□ 2.8
RAB28-201ENST00000288723 POGZQ7Z3K3 1410 aa32.5■■■□□ 2.79
RAB28-201ENST00000288723 CDC42BPAQ5VT25 1732 aa32.49■■■□□ 2.79
RAB28-201ENST00000288723 GPATCH8Q9UKJ3 1502 aaKnown RBP32.48■■■□□ 2.79
RAB28-201ENST00000288723 ZNF777Q9ULD5 760 aaPredicted RBP32.47■■■□□ 2.79
RAB28-201ENST00000288723 AFAP1Q8N556 730 aa32.46■■■□□ 2.79
RAB28-201ENST00000288723 EHBP1L1Q8N3D4 1523 aa32.45■■■□□ 2.79
RAB28-201ENST00000288723 ZMYM4Q5VZL5 1548 aa32.45■■■□□ 2.78
RAB28-201ENST00000288723 CCNB3Q8WWL7 1395 aa32.44■■■□□ 2.78
RAB28-201ENST00000288723 YEATS2Q9ULM3 1422 aa32.44■■■□□ 2.78
RAB28-201ENST00000288723 TIAM1Q13009 1591 aa32.43■■■□□ 2.78
RAB28-201ENST00000288723 ARHGEF40Q8TER5 1519 aa32.41■■■□□ 2.78
RAB28-201ENST00000288723 ARHGEF12Q9NZN5 1544 aa32.41■■■□□ 2.78
RAB28-201ENST00000288723 ARID4BQ4LE39 1312 aaPredicted RBP32.4■■■□□ 2.78
RAB28-201ENST00000288723 CFDP1Q9UEE9 299 aaPredicted RBP32.4■■■□□ 2.78
RAB28-201ENST00000288723 ZFYVE16Q7Z3T8 1539 aa32.39■■■□□ 2.78
RAB28-201ENST00000288723 ZNF518AQ6AHZ1 1483 aa32.38■■■□□ 2.77
RAB28-201ENST00000288723 ABCC1P33527 1531 aa32.38■■■□□ 2.77
RAB28-201ENST00000288723 MAGI2Q86UL8 1455 aa32.38■■■□□ 2.77
RAB28-201ENST00000288723 TRAPPC8Q9Y2L5 1435 aa32.36■■■□□ 2.77
RAB28-201ENST00000288723 MYT1LQ9UL68 1186 aa32.34■■■□□ 2.77
RAB28-201ENST00000288723 SAMD9LQ8IVG5 1584 aa32.34■■■□□ 2.77
RAB28-201ENST00000288723 KANK4Q5T7N3 995 aaPredicted RBP32.33■■■□□ 2.77
RAB28-201ENST00000288723 NCOA2Q15596 1464 aa32.31■■■□□ 2.76
RAB28-201ENST00000288723 LRRC9Q6ZRR7 1453 aa32.31■■■□□ 2.76
RAB28-201ENST00000288723 HNRNPMP52272 730 aaKnown RBP eCLIP32.31■■■□□ 2.762e-6■■■■□ 25.1
RAB28-201ENST00000288723 KDM5CP41229 1560 aa32.31■■■□□ 2.76
RAB28-201ENST00000288723 ITSN2Q9NZM3 1697 aa32.31■■■□□ 2.76
RAB28-201ENST00000288723 ZNF644Q9H582 1327 aaPredicted RBP32.29■■■□□ 2.76
RAB28-201ENST00000288723 SUPT6HQ7KZ85 1726 aaKnown RBP32.28■■■□□ 2.76
RAB28-201ENST00000288723 SYCP2Q9BX26 1530 aa32.27■■■□□ 2.76
RAB28-201ENST00000288723 MAP3K1Q13233 1512 aa32.26■■■□□ 2.75
RAB28-201ENST00000288723 SIGLEC1Q9BZZ2 1709 aa32.26■■■□□ 2.75
RAB28-201ENST00000288723 ATP10AO60312 1499 aa32.25■■■□□ 2.75
RAB28-201ENST00000288723 HECW2Q9P2P5 1572 aa32.23■■■□□ 2.75
RAB28-201ENST00000288723 APLP2Q06481 763 aa32.23■■■□□ 2.75
RAB28-201ENST00000288723 MLH3Q9UHC1 1453 aa32.22■■■□□ 2.75
RAB28-201ENST00000288723 BCORL1Q5H9F3 1711 aa32.22■■■□□ 2.75
RAB28-201ENST00000288723 KIAA1107Q9UPP5 1409 aa32.2■■■□□ 2.75
RAB28-201ENST00000288723 ADAMTSL3P82987 1691 aa32.2■■■□□ 2.75
RAB28-201ENST00000288723 PLEKHH2Q8IVE3 1493 aa32.2■■■□□ 2.75
RAB28-201ENST00000288723 MLECQ14165 292 aa32.2■■■□□ 2.75
RAB28-201ENST00000288723 C9orf84Q5VXU9 1444 aa32.19■■■□□ 2.74
RAB28-201ENST00000288723 DIP2CQ9Y2E4 1556 aa32.16■■■□□ 2.74
RAB28-201ENST00000288723 ABCA6Q8N139 1617 aa32.15■■■□□ 2.74
RAB28-201ENST00000288723 SPAG9O60271 1321 aaKnown RBP32.15■■■□□ 2.74
RAB28-201ENST00000288723 KIDINS220Q9ULH0 1771 aa32.13■■■□□ 2.73
RAB28-201ENST00000288723 MADDQ8WXG6 1647 aa32.13■■■□□ 2.73
RAB28-201ENST00000288723 MBD5Q9P267 1494 aa32.1■■■□□ 2.73
RAB28-201ENST00000288723 PTPRMP28827 1452 aa32.1■■■□□ 2.73
RAB28-201ENST00000288723 CAMSAP2Q08AD1 1489 aa32.09■■■□□ 2.73
RAB28-201ENST00000288723 ATP7AQ04656 1500 aa32.04■■■□□ 2.72
RAB28-201ENST00000288723 RIMS1Q86UR5 1692 aaKnown RBP32.02■■■□□ 2.72
RAB28-201ENST00000288723 REREQ9P2R6 1566 aa32.02■■■□□ 2.72
RAB28-201ENST00000288723 PLPPR3Q6T4P5 718 aa32.02■■■□□ 2.72
RAB28-201ENST00000288723 MYOM3Q5VTT5 1437 aa32.02■■■□□ 2.72
RAB28-201ENST00000288723 INO80Q9ULG1 1556 aaPredicted RBP32■■■□□ 2.71
RAB28-201ENST00000288723 CCDC141Q6ZP82 1450 aa31.96■■■□□ 2.71
RAB28-201ENST00000288723 AGLP35573 1532 aa31.94■■■□□ 2.7
RAB28-201ENST00000288723 MIA2Q96PC5 1412 aa31.94■■■□□ 2.7
RAB28-201ENST00000288723 FER1L4A9Z1Z3 1794 aa31.94■■■□□ 2.7
RAB28-201ENST00000288723 RSPH4AQ5TD94 716 aa31.94■■■□□ 2.7
RAB28-201ENST00000288723 A2MP01023 1474 aa31.91■■■□□ 2.7
RAB28-201ENST00000288723 RTEL1-TNFRSF6BF6WH68 1400 aa31.9■■■□□ 2.7
RAB28-201ENST00000288723 ARHGEF5Q12774 1597 aa31.89■■■□□ 2.69
RAB28-201ENST00000288723 TSPY4P0CV99 314 aa31.88■■■□□ 2.69
RAB28-201ENST00000288723 TSPY10P0CW01 314 aa31.88■■■□□ 2.69
RAB28-201ENST00000288723 CEBPAP49715 358 aaPredicted RBP31.86■■■□□ 2.69
RAB28-201ENST00000288723 PLXNC1O60486 1568 aa31.84■■■□□ 2.69
RAB28-201ENST00000288723 ESF1Q9H501 851 aaKnown RBP31.82■■■□□ 2.68
RAB28-201ENST00000288723 ADGBQ8N7X0 1667 aa31.82■■■□□ 2.68
RAB28-201ENST00000288723 FGD6Q6ZV73 1430 aa31.82■■■□□ 2.68
RAB28-201ENST00000288723 PTPN23Q9H3S7 1636 aa31.81■■■□□ 2.68
RAB28-201ENST00000288723 PPARGC1BQ86YN6 1023 aaKnown RBP31.8■■■□□ 2.68
RAB28-201ENST00000288723 DHX29Q7Z478 1369 aaKnown RBP31.8■■■□□ 2.68
RAB28-201ENST00000288723 GGT6Q6P531 493 aa31.79■■■□□ 2.68
RAB28-201ENST00000288723 TCOF1Q13428 1488 aaKnown RBP31.72■■■□□ 2.67
RAB28-201ENST00000288723 KIF3BO15066 747 aa31.72■■■□□ 2.67
RAB28-201ENST00000288723 ABCC5O15440 1437 aa31.72■■■□□ 2.67
RAB28-201ENST00000288723 MAST1Q9Y2H9 1570 aa31.71■■■□□ 2.67
RAB28-201ENST00000288723 LMTK3Q96Q04 1460 aa31.7■■■□□ 2.66
RAB28-201ENST00000288723 CNTLNQ9NXG0 1405 aa31.68■■■□□ 2.66
RAB28-201ENST00000288723 FAM50AQ14320 339 aaKnown RBP31.68■■■□□ 2.66
RAB28-201ENST00000288723 C3P01024 1663 aa31.67■■■□□ 2.66
RAB28-201ENST00000288723 DAPK1P53355 1430 aa31.67■■■□□ 2.66
RAB28-201ENST00000288723 HSPA2P54652 639 aa31.64■■■□□ 2.66
RAB28-201ENST00000288723 ZMYM3Q14202 1370 aa31.64■■■□□ 2.66
RAB28-201ENST00000288723 CHIC2Q9UKJ5 165 aa31.63■■■□□ 2.65
RAB28-201ENST00000288723 DNMT1P26358 1616 aaKnown RBP31.62■■■□□ 2.65
RAB28-201ENST00000288723 CLTCQ00610 1675 aaKnown RBP31.62■■■□□ 2.65
RAB28-201ENST00000288723 CROCC2H7BZ55 1655 aa31.62■■■□□ 2.65
RAB28-201ENST00000288723 RRP7BPQ9NSQ0 103 aa31.61■■■□□ 2.65
RAB28-201ENST00000288723 SHANK2Q9UPX8 1470 aa31.6■■■□□ 2.65
RAB28-201ENST00000288723 PPP6R1Q9UPN7 881 aa31.6■■■□□ 2.65
RAB28-201ENST00000288723 KIF15Q9NS87 1388 aa31.57■■■□□ 2.64
RAB28-201ENST00000288723 MROH2AA6NES4 1674 aa31.57■■■□□ 2.64
RAB28-201ENST00000288723 PREX1Q8TCU6 1659 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms