RNA–Protein interactions for RNA: ENST00000287820.10

PPARG-201, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPARG, Length 1,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-201ENST00000287820 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.28
PPARG-201ENST00000287820 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
PPARG-201ENST00000287820 ARHGAP5Q13017 1502 aa13.31□□□□□ -0.28
PPARG-201ENST00000287820 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
PPARG-201ENST00000287820 RICTORQ6R327 1708 aa13.31□□□□□ -0.28
PPARG-201ENST00000287820 FRMPD1Q5SYB0 1578 aa13.31□□□□□ -0.28
PPARG-201ENST00000287820 AFAP1Q8N556 730 aa13.3□□□□□ -0.28
PPARG-201ENST00000287820 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
PPARG-201ENST00000287820 CFDP1Q9UEE9 299 aaPredicted RBP13.29□□□□□ -0.28
PPARG-201ENST00000287820 KANK4Q5T7N3 995 aaPredicted RBP13.29□□□□□ -0.28
PPARG-201ENST00000287820 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
PPARG-201ENST00000287820 MAP3K1Q13233 1512 aa13.28□□□□□ -0.28
PPARG-201ENST00000287820 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
PPARG-201ENST00000287820 ZNF777Q9ULD5 760 aaPredicted RBP13.27□□□□□ -0.28
PPARG-201ENST00000287820 TIAM1Q13009 1591 aa13.27□□□□□ -0.28
PPARG-201ENST00000287820 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
PPARG-201ENST00000287820 EHBP1L1Q8N3D4 1523 aa13.27□□□□□ -0.29
PPARG-201ENST00000287820 MAGI2Q86UL8 1455 aa13.26□□□□□ -0.29
PPARG-201ENST00000287820 LRRC9Q6ZRR7 1453 aa13.25□□□□□ -0.29
PPARG-201ENST00000287820 HNRNPMP52272 730 aaKnown RBP eCLIP13.25□□□□□ -0.29
PPARG-201ENST00000287820 APLP2Q06481 763 aa13.25□□□□□ -0.29
PPARG-201ENST00000287820 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
PPARG-201ENST00000287820 ZMYM4Q5VZL5 1548 aa13.25□□□□□ -0.29
PPARG-201ENST00000287820 YEATS2Q9ULM3 1422 aa13.24□□□□□ -0.29
PPARG-201ENST00000287820 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
PPARG-201ENST00000287820 ZNF518AQ6AHZ1 1483 aa13.24□□□□□ -0.29
PPARG-201ENST00000287820 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
PPARG-201ENST00000287820 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
PPARG-201ENST00000287820 KIAA1107Q9UPP5 1409 aa13.23□□□□□ -0.29
PPARG-201ENST00000287820 SUPT6HQ7KZ85 1726 aaKnown RBP13.21□□□□□ -0.29
PPARG-201ENST00000287820 ABCC1P33527 1531 aa13.21□□□□□ -0.29
PPARG-201ENST00000287820 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.29
PPARG-201ENST00000287820 ARID4BQ4LE39 1312 aaPredicted RBP13.21□□□□□ -0.29
PPARG-201ENST00000287820 KDM5CP41229 1560 aa13.21□□□□□ -0.3
PPARG-201ENST00000287820 ATP10AO60312 1499 aa13.2□□□□□ -0.3
PPARG-201ENST00000287820 MLH3Q9UHC1 1453 aa13.2□□□□□ -0.3
PPARG-201ENST00000287820 ZFYVE16Q7Z3T8 1539 aa13.2□□□□□ -0.3
PPARG-201ENST00000287820 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
PPARG-201ENST00000287820 PLEKHH2Q8IVE3 1493 aa13.2□□□□□ -0.3
PPARG-201ENST00000287820 ARHGEF40Q8TER5 1519 aa13.19□□□□□ -0.3
PPARG-201ENST00000287820 ITSN2Q9NZM3 1697 aa13.18□□□□□ -0.3
PPARG-201ENST00000287820 RSPH4AQ5TD94 716 aa13.18□□□□□ -0.3
PPARG-201ENST00000287820 SPAG9O60271 1321 aaKnown RBP13.17□□□□□ -0.3
PPARG-201ENST00000287820 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
PPARG-201ENST00000287820 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
PPARG-201ENST00000287820 HECW2Q9P2P5 1572 aa13.15□□□□□ -0.31
PPARG-201ENST00000287820 KIDINS220Q9ULH0 1771 aa13.14□□□□□ -0.31
PPARG-201ENST00000287820 ADAMTSL3P82987 1691 aa13.14□□□□□ -0.31
PPARG-201ENST00000287820 C9orf84Q5VXU9 1444 aa13.14□□□□□ -0.31
PPARG-201ENST00000287820 BCORL1Q5H9F3 1711 aa13.14□□□□□ -0.31
PPARG-201ENST00000287820 SIGLEC1Q9BZZ2 1709 aa13.14□□□□□ -0.31
PPARG-201ENST00000287820 MLECQ14165 292 aa13.13□□□□□ -0.31
PPARG-201ENST00000287820 MYOM3Q5VTT5 1437 aa13.12□□□□□ -0.31
PPARG-201ENST00000287820 MIA2Q96PC5 1412 aa13.12□□□□□ -0.31
PPARG-201ENST00000287820 DIP2CQ9Y2E4 1556 aa13.12□□□□□ -0.31
PPARG-201ENST00000287820 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
PPARG-201ENST00000287820 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
PPARG-201ENST00000287820 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
PPARG-201ENST00000287820 TSPY4P0CV99 314 aa13.1□□□□□ -0.31
PPARG-201ENST00000287820 TSPY10P0CW01 314 aa13.1□□□□□ -0.31
PPARG-201ENST00000287820 REREQ9P2R6 1566 aa13.1□□□□□ -0.31
PPARG-201ENST00000287820 PTPRMP28827 1452 aa13.08□□□□□ -0.31
PPARG-201ENST00000287820 ATP7AQ04656 1500 aa13.08□□□□□ -0.32
PPARG-201ENST00000287820 AGLP35573 1532 aa13.08□□□□□ -0.32
PPARG-201ENST00000287820 CCDC141Q6ZP82 1450 aa13.07□□□□□ -0.32
PPARG-201ENST00000287820 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
PPARG-201ENST00000287820 MADDQ8WXG6 1647 aa13.07□□□□□ -0.32
PPARG-201ENST00000287820 INO80Q9ULG1 1556 aaPredicted RBP13.06□□□□□ -0.32
PPARG-201ENST00000287820 DHX29Q7Z478 1369 aaKnown RBP13.05□□□□□ -0.32
PPARG-201ENST00000287820 A2MP01023 1474 aa13.05□□□□□ -0.32
PPARG-201ENST00000287820 FGD6Q6ZV73 1430 aa13.04□□□□□ -0.32
PPARG-201ENST00000287820 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
PPARG-201ENST00000287820 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
PPARG-201ENST00000287820 RIMS1Q86UR5 1692 aaKnown RBP13.02□□□□□ -0.32
PPARG-201ENST00000287820 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.32
PPARG-201ENST00000287820 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.33
PPARG-201ENST00000287820 CEBPAP49715 358 aaPredicted RBP13.02□□□□□ -0.33
PPARG-201ENST00000287820 GGT6Q6P531 493 aa13.02□□□□□ -0.33
PPARG-201ENST00000287820 TCOF1Q13428 1488 aaKnown RBP13.01□□□□□ -0.33
PPARG-201ENST00000287820 ADGBQ8N7X0 1667 aa13.01□□□□□ -0.33
PPARG-201ENST00000287820 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
PPARG-201ENST00000287820 ABCC5O15440 1437 aa13.01□□□□□ -0.33
PPARG-201ENST00000287820 FER1L4A9Z1Z3 1794 aa13.01□□□□□ -0.33
PPARG-201ENST00000287820 SETD1BQ9UPS6 1966 aaKnown RBP13.01□□□□□ -0.33
PPARG-201ENST00000287820 PLXNC1O60486 1568 aa13□□□□□ -0.33
PPARG-201ENST00000287820 KIF3BO15066 747 aa13□□□□□ -0.33
PPARG-201ENST00000287820 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
PPARG-201ENST00000287820 MAST1Q9Y2H9 1570 aa12.99□□□□□ -0.33
PPARG-201ENST00000287820 FAM50AQ14320 339 aaKnown RBP12.99□□□□□ -0.33
PPARG-201ENST00000287820 DAPK1P53355 1430 aa12.97□□□□□ -0.33
PPARG-201ENST00000287820 CNTLNQ9NXG0 1405 aa12.97□□□□□ -0.33
PPARG-201ENST00000287820 ZMYM3Q14202 1370 aa12.96□□□□□ -0.33
PPARG-201ENST00000287820 RRP7BPQ9NSQ0 103 aa12.96□□□□□ -0.33
PPARG-201ENST00000287820 CHIC2Q9UKJ5 165 aa12.96□□□□□ -0.33
PPARG-201ENST00000287820 DNMT1P26358 1616 aaKnown RBP12.95□□□□□ -0.34
PPARG-201ENST00000287820 SHANK2Q9UPX8 1470 aa12.94□□□□□ -0.34
PPARG-201ENST00000287820 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
PPARG-201ENST00000287820 MSH5O43196 834 aa12.92□□□□□ -0.34
PPARG-201ENST00000287820 ANKRD30AQ9BXX3 1397 aa12.92□□□□□ -0.34
PPARG-201ENST00000287820 KIF15Q9NS87 1388 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms