RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 ARHGAP5Q13017 1502 aa17.08■□□□□ 0.32
XRCC4-201ENST00000282268 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
XRCC4-201ENST00000282268 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
XRCC4-201ENST00000282268 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
XRCC4-201ENST00000282268 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
XRCC4-201ENST00000282268 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
XRCC4-201ENST00000282268 PLCH2O75038 1416 aa17.03■□□□□ 0.32
XRCC4-201ENST00000282268 EFCAB2Q5VUJ9 269 aa17.02■□□□□ 0.32
XRCC4-201ENST00000282268 DAPK1P53355 1430 aa17.01■□□□□ 0.31
XRCC4-201ENST00000282268 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
XRCC4-201ENST00000282268 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
XRCC4-201ENST00000282268 ABCC5O15440 1437 aa17.01■□□□□ 0.31
XRCC4-201ENST00000282268 ABCA9Q8IUA7 1624 aa17■□□□□ 0.31
XRCC4-201ENST00000282268 SAMD9LQ8IVG5 1584 aa17■□□□□ 0.31
XRCC4-201ENST00000282268 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
XRCC4-201ENST00000282268 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
XRCC4-201ENST00000282268 CD109Q6YHK3 1445 aa16.99■□□□□ 0.31
XRCC4-201ENST00000282268 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
XRCC4-201ENST00000282268 DNMT1P26358 1616 aaKnown RBP16.97■□□□□ 0.31
XRCC4-201ENST00000282268 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
XRCC4-201ENST00000282268 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.31
XRCC4-201ENST00000282268 FANCAO15360 1455 aa16.95■□□□□ 0.3
XRCC4-201ENST00000282268 RAB3GAP2Q9H2M9 1393 aa16.95■□□□□ 0.3
XRCC4-201ENST00000282268 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
XRCC4-201ENST00000282268 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
XRCC4-201ENST00000282268 PLEKHH2Q8IVE3 1493 aa16.92■□□□□ 0.3
XRCC4-201ENST00000282268 MBD5Q9P267 1494 aa16.92■□□□□ 0.3
XRCC4-201ENST00000282268 ARHGEF12Q9NZN5 1544 aa16.92■□□□□ 0.3
XRCC4-201ENST00000282268 AKNAQ7Z591 1439 aa16.91■□□□□ 0.3
XRCC4-201ENST00000282268 C9orf84Q5VXU9 1444 aa16.9■□□□□ 0.3
XRCC4-201ENST00000282268 CCDC141Q6ZP82 1450 aa16.9■□□□□ 0.3
XRCC4-201ENST00000282268 ARAP3Q8WWN8 1544 aa16.9■□□□□ 0.3
XRCC4-201ENST00000282268 HFM1A2PYH4 1435 aa16.9■□□□□ 0.3
XRCC4-201ENST00000282268 NAIPQ13075 1403 aa16.9■□□□□ 0.3
XRCC4-201ENST00000282268 DIP2BQ9P265 1576 aa16.9■□□□□ 0.3
XRCC4-201ENST00000282268 MYT1LQ9UL68 1186 aa16.89■□□□□ 0.29
XRCC4-201ENST00000282268 KIAA1107Q9UPP5 1409 aa16.89■□□□□ 0.29
XRCC4-201ENST00000282268 ABCC1P33527 1531 aa16.89■□□□□ 0.29
XRCC4-201ENST00000282268 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
XRCC4-201ENST00000282268 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
XRCC4-201ENST00000282268 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
XRCC4-201ENST00000282268 SCAPERQ9BY12 1400 aa16.88■□□□□ 0.29
XRCC4-201ENST00000282268 TRAPPC8Q9Y2L5 1435 aa16.88■□□□□ 0.29
XRCC4-201ENST00000282268 RSPH4AQ5TD94 716 aa16.88■□□□□ 0.29
XRCC4-201ENST00000282268 AFAP1Q8N556 730 aa16.88■□□□□ 0.29
XRCC4-201ENST00000282268 GLI2P10070 1586 aa16.87■□□□□ 0.29
XRCC4-201ENST00000282268 ROCK1Q13464 1354 aa16.87■□□□□ 0.29
XRCC4-201ENST00000282268 ANKRD30AQ9BXX3 1397 aa16.87■□□□□ 0.29
XRCC4-201ENST00000282268 MAP3K4Q9Y6R4 1608 aa16.86■□□□□ 0.29
XRCC4-201ENST00000282268 TRIM52Q96A61 297 aa16.85■□□□□ 0.29
XRCC4-201ENST00000282268 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
XRCC4-201ENST00000282268 ADGBQ8N7X0 1667 aa16.84■□□□□ 0.29
XRCC4-201ENST00000282268 NCOA1Q15788 1441 aa16.84■□□□□ 0.29
XRCC4-201ENST00000282268 TSPOAP1O95153 1857 aa16.84■□□□□ 0.29
XRCC4-201ENST00000282268 KDM6BO15054 1643 aa16.84■□□□□ 0.29
XRCC4-201ENST00000282268 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.29
XRCC4-201ENST00000282268 HRCP23327 699 aa16.83■□□□□ 0.28
XRCC4-201ENST00000282268 CFAP74Q9C0B2 1584 aa16.83■□□□□ 0.28
XRCC4-201ENST00000282268 ADGRL2O95490 1459 aa16.82■□□□□ 0.28
XRCC4-201ENST00000282268 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
XRCC4-201ENST00000282268 GCC2Q8IWJ2 1684 aa16.82■□□□□ 0.28
XRCC4-201ENST00000282268 DHX57Q6P158 1386 aaKnown RBP16.81■□□□□ 0.28
XRCC4-201ENST00000282268 KIF15Q9NS87 1388 aa16.81■□□□□ 0.28
XRCC4-201ENST00000282268 RAPGEF3O95398 923 aa16.79■□□□□ 0.28
XRCC4-201ENST00000282268 NEO1Q92859 1461 aa16.79■□□□□ 0.28
XRCC4-201ENST00000282268 KIF13AQ9H1H9 1805 aa16.78■□□□□ 0.28
XRCC4-201ENST00000282268 MAST1Q9Y2H9 1570 aa16.77■□□□□ 0.28
XRCC4-201ENST00000282268 ANKRD50Q9ULJ7 1429 aa16.76■□□□□ 0.27
XRCC4-201ENST00000282268 DENND4BO75064 1496 aaPredicted RBP16.76■□□□□ 0.27
XRCC4-201ENST00000282268 POGZQ7Z3K3 1410 aa16.75■□□□□ 0.27
XRCC4-201ENST00000282268 TEX14Q8IWB6 1497 aa16.75■□□□□ 0.27
XRCC4-201ENST00000282268 PPRC1Q5VV67 1664 aaKnown RBP16.75■□□□□ 0.27
XRCC4-201ENST00000282268 ZNF518AQ6AHZ1 1483 aa16.74■□□□□ 0.27
XRCC4-201ENST00000282268 ZFYVE16Q7Z3T8 1539 aa16.73■□□□□ 0.27
XRCC4-201ENST00000282268 ATP7AQ04656 1500 aa16.72■□□□□ 0.27
XRCC4-201ENST00000282268 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
XRCC4-201ENST00000282268 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
XRCC4-201ENST00000282268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
XRCC4-201ENST00000282268 PLXNC1O60486 1568 aa16.71■□□□□ 0.26
XRCC4-201ENST00000282268 INO80Q9ULG1 1556 aaPredicted RBP16.69■□□□□ 0.26
XRCC4-201ENST00000282268 DUOX2Q9NRD8 1548 aa16.69■□□□□ 0.26
XRCC4-201ENST00000282268 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
XRCC4-201ENST00000282268 FOXD1Q16676 465 aa16.68■□□□□ 0.26
XRCC4-201ENST00000282268 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
XRCC4-201ENST00000282268 NUP155O75694 1391 aa16.66■□□□□ 0.26
XRCC4-201ENST00000282268 KDM5CP41229 1560 aa16.66■□□□□ 0.26
XRCC4-201ENST00000282268 HECW2Q9P2P5 1572 aa16.66■□□□□ 0.26
XRCC4-201ENST00000282268 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
XRCC4-201ENST00000282268 KIDINS220Q9ULH0 1771 aa16.65■□□□□ 0.26
XRCC4-201ENST00000282268 RICTORQ6R327 1708 aa16.65■□□□□ 0.26
XRCC4-201ENST00000282268 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
XRCC4-201ENST00000282268 SIN3AQ96ST3 1273 aa16.64■□□□□ 0.25
XRCC4-201ENST00000282268 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
XRCC4-201ENST00000282268 KIF3BO15066 747 aa16.63■□□□□ 0.25
XRCC4-201ENST00000282268 ERBINQ96RT1 1412 aa16.63■□□□□ 0.25
XRCC4-201ENST00000282268 DHX29Q7Z478 1369 aaKnown RBP16.63■□□□□ 0.25
XRCC4-201ENST00000282268 COL17A1Q9UMD9 1497 aaPredicted RBP16.63■□□□□ 0.25
XRCC4-201ENST00000282268 ACIN1Q9UKV3 1341 aaKnown RBP16.63■□□□□ 0.25
XRCC4-201ENST00000282268 PZPP20742 1482 aa16.62■□□□□ 0.25
XRCC4-201ENST00000282268 YEATS2Q9ULM3 1422 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms