RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 RSPH6AQ9H0K4 717 aa4.73□□□□□ -1.65
HERC4-201ENST00000277817 CADPS2Q86UW7 1296 aa4.72□□□□□ -1.65
HERC4-201ENST00000277817 CCDC88BA6NC98 1476 aa4.72□□□□□ -1.65
HERC4-201ENST00000277817 TRAIPQ9BWF2 469 aa4.72□□□□□ -1.65
HERC4-201ENST00000277817 ARIH1Q9Y4X5 557 aaPredicted RBP4.71□□□□□ -1.66
HERC4-201ENST00000277817 ZNF608Q9ULD9 1512 aaPredicted RBP4.71□□□□□ -1.66
HERC4-201ENST00000277817 CTTNBP2Q8WZ74 1663 aa4.71□□□□□ -1.66
HERC4-201ENST00000277817 SLC24A3Q9HC58 644 aa4.7□□□□□ -1.66
HERC4-201ENST00000277817 STAG3Q9UJ98 1225 aa4.69□□□□□ -1.66
HERC4-201ENST00000277817 P3H3Q8IVL6 736 aa4.69□□□□□ -1.66
HERC4-201ENST00000277817 FER1L4A9Z1Z3 1794 aa4.69□□□□□ -1.66
HERC4-201ENST00000277817 CHRM1P11229 460 aaPredicted RBP4.68□□□□□ -1.66
HERC4-201ENST00000277817 BARGINQ6ZT62 677 aa4.68□□□□□ -1.66
HERC4-201ENST00000277817 IGSF5Q9NSI5 407 aa4.68□□□□□ -1.66
HERC4-201ENST00000277817 GRIN2BQ13224 1484 aa4.68□□□□□ -1.66
HERC4-201ENST00000277817 SSUH2Q9Y2M2 353 aa4.67□□□□□ -1.66
HERC4-201ENST00000277817 ZMYM4Q5VZL5 1548 aa4.67□□□□□ -1.66
HERC4-201ENST00000277817 ARAP3Q8WWN8 1544 aa4.67□□□□□ -1.66
HERC4-201ENST00000277817 FRMPD1Q5SYB0 1578 aa4.67□□□□□ -1.66
HERC4-201ENST00000277817 TTBK1Q5TCY1 1321 aaPredicted RBP4.66□□□□□ -1.66
HERC4-201ENST00000277817 UGGT2Q9NYU1 1516 aa4.66□□□□□ -1.66
HERC4-201ENST00000277817 SAMD9Q5K651 1589 aa4.66□□□□□ -1.66
HERC4-201ENST00000277817 MROH2AA6NES4 1674 aa4.66□□□□□ -1.66
HERC4-201ENST00000277817 NUBP1P53384 320 aa4.65□□□□□ -1.66
HERC4-201ENST00000277817 ABCC10Q5T3U5 1492 aa4.65□□□□□ -1.66
HERC4-201ENST00000277817 A6NJR5 290 aa4.65□□□□□ -1.66
HERC4-201ENST00000277817 ARHGEF1Q92888 912 aaKnown RBP4.65□□□□□ -1.66
HERC4-201ENST00000277817 ABCA9Q8IUA7 1624 aa4.65□□□□□ -1.66
HERC4-201ENST00000277817 RICTORQ6R327 1708 aa4.65□□□□□ -1.66
HERC4-201ENST00000277817 ZNF142P52746 1687 aaPredicted RBP4.65□□□□□ -1.67
HERC4-201ENST00000277817 FNBP4Q8N3X1 1017 aaPredicted RBP4.65□□□□□ -1.67
HERC4-201ENST00000277817 CCDC9Q9Y3X0 531 aaKnown RBP4.65□□□□□ -1.67
HERC4-201ENST00000277817 GRIN2AQ12879 1464 aa4.65□□□□□ -1.67
HERC4-201ENST00000277817 MKRN3Q13064 507 aaKnown RBP4.65□□□□□ -1.67
HERC4-201ENST00000277817 POLA2Q14181 598 aa4.63□□□□□ -1.67
HERC4-201ENST00000277817 ABCA8O94911 1581 aa4.63□□□□□ -1.67
HERC4-201ENST00000277817 KDM5AP29375 1690 aaKnown RBP4.63□□□□□ -1.67
HERC4-201ENST00000277817 PLEKHG3A1L390 1219 aa4.62□□□□□ -1.67
HERC4-201ENST00000277817 NEUROD2Q15784 382 aa4.62□□□□□ -1.67
HERC4-201ENST00000277817 IQSEC2Q5JU85 1478 aa4.62□□□□□ -1.67
HERC4-201ENST00000277817 RIOK3O14730 519 aaKnown RBP4.62□□□□□ -1.67
HERC4-201ENST00000277817 CFAP74Q9C0B2 1584 aa4.61□□□□□ -1.67
HERC4-201ENST00000277817 ZCCHC11Q5TAX3 1644 aaKnown RBP4.61□□□□□ -1.67
HERC4-201ENST00000277817 SIGLEC1Q9BZZ2 1709 aa4.61□□□□□ -1.67
HERC4-201ENST00000277817 GPR37O15354 613 aa4.61□□□□□ -1.67
HERC4-201ENST00000277817 SNAPC4Q5SXM2 1469 aa4.61□□□□□ -1.67
HERC4-201ENST00000277817 MAGI3Q5TCQ9 1506 aa4.61□□□□□ -1.67
HERC4-201ENST00000277817 FGD5Q6ZNL6 1462 aa4.6□□□□□ -1.67
HERC4-201ENST00000277817 PELP1Q8IZL8 1130 aaKnown RBP4.6□□□□□ -1.67
HERC4-201ENST00000277817 GOPCQ9HD26 462 aa4.6□□□□□ -1.67
HERC4-201ENST00000277817 TTC37Q6PGP7 1564 aa4.6□□□□□ -1.67
HERC4-201ENST00000277817 PCF11O94913 1555 aaKnown RBP4.6□□□□□ -1.67
HERC4-201ENST00000277817 KIAA0556O60303 1618 aa4.59□□□□□ -1.67
HERC4-201ENST00000277817 MNX1P50219 401 aaPredicted RBP4.59□□□□□ -1.68
HERC4-201ENST00000277817 PUS7Q96PZ0 661 aaKnown RBP4.58□□□□□ -1.68
HERC4-201ENST00000277817 TRAK2O60296 914 aa4.58□□□□□ -1.68
HERC4-201ENST00000277817 KDM4CQ9H3R0 1056 aa4.57□□□□□ -1.68
HERC4-201ENST00000277817 FHAD1B1AJZ9 1412 aa4.57□□□□□ -1.68
HERC4-201ENST00000277817 EPRSP07814 1512 aaKnown RBP4.57□□□□□ -1.68
HERC4-201ENST00000277817 GPBP1L1Q9HC44 474 aaPredicted RBP4.57□□□□□ -1.68
HERC4-201ENST00000277817 ABCC2Q92887 1545 aa4.56□□□□□ -1.68
HERC4-201ENST00000277817 CAMK2BQ13554 666 aa4.56□□□□□ -1.68
HERC4-201ENST00000277817 MFSD10Q14728 455 aa4.56□□□□□ -1.68
HERC4-201ENST00000277817 SPINK5Q9NQ38 1064 aaPredicted RBP4.56□□□□□ -1.68
HERC4-201ENST00000277817 SEMA3EO15041 775 aa4.56□□□□□ -1.68
HERC4-201ENST00000277817 VGFO15240 615 aaPredicted RBP4.56□□□□□ -1.68
HERC4-201ENST00000277817 PDIA4P13667 645 aaKnown RBP4.55□□□□□ -1.68
HERC4-201ENST00000277817 AK7Q96M32 723 aa4.55□□□□□ -1.68
HERC4-201ENST00000277817 LRRIQ1Q96JM4 1722 aa4.55□□□□□ -1.68
HERC4-201ENST00000277817 GAPVD1Q14C86 1478 aa4.55□□□□□ -1.68
HERC4-201ENST00000277817 DCAF8L1A6NGE4 600 aa4.55□□□□□ -1.68
HERC4-201ENST00000277817 TRIM66O15016 1216 aa4.55□□□□□ -1.68
HERC4-201ENST00000277817 IRF5Q13568 498 aa4.54□□□□□ -1.68
HERC4-201ENST00000277817 PREX1Q8TCU6 1659 aa4.54□□□□□ -1.68
HERC4-201ENST00000277817 CCDC82Q8N4S0 544 aa4.54□□□□□ -1.68
HERC4-201ENST00000277817 WDR7Q9Y4E6 1490 aa4.54□□□□□ -1.68
HERC4-201ENST00000277817 ARHGEF40Q8TER5 1519 aa4.54□□□□□ -1.68
HERC4-201ENST00000277817 DISP1Q96F81 1524 aa4.54□□□□□ -1.68
HERC4-201ENST00000277817 ARID3CA6NKF2 412 aa4.54□□□□□ -1.68
HERC4-201ENST00000277817 KCTD17Q8N5Z5 321 aa4.54□□□□□ -1.68
HERC4-201ENST00000277817 STRCQ7RTU9 1775 aa4.54□□□□□ -1.68
HERC4-201ENST00000277817 ZBTB7CA1YPR0 619 aa4.53□□□□□ -1.68
HERC4-201ENST00000277817 LMTK3Q96Q04 1460 aa4.53□□□□□ -1.68
HERC4-201ENST00000277817 KDM5CP41229 1560 aa4.53□□□□□ -1.68
HERC4-201ENST00000277817 IQGAP2Q13576 1575 aa4.53□□□□□ -1.68
HERC4-201ENST00000277817 OXER1Q8TDS5 423 aa4.53□□□□□ -1.68
HERC4-201ENST00000277817 RYDENQ9NUL5 291 aaKnown RBP4.53□□□□□ -1.68
HERC4-201ENST00000277817 MTMR7Q9Y216 660 aa4.52□□□□□ -1.69
HERC4-201ENST00000277817 GSE1Q14687 1217 aa4.52□□□□□ -1.69
HERC4-201ENST00000277817 HECW2Q9P2P5 1572 aa4.52□□□□□ -1.69
HERC4-201ENST00000277817 CAMSAP2Q08AD1 1489 aa4.51□□□□□ -1.69
HERC4-201ENST00000277817 FLIIQ13045 1269 aa4.51□□□□□ -1.69
HERC4-201ENST00000277817 AQRO60306 1485 aaKnown RBP eCLIP4.51□□□□□ -1.69
HERC4-201ENST00000277817 MYT1Q01538 1121 aa4.51□□□□□ -1.69
HERC4-201ENST00000277817 ZNF428Q96B54 188 aa4.51□□□□□ -1.69
HERC4-201ENST00000277817 AMOTL2Q9Y2J4 779 aa4.51□□□□□ -1.69
HERC4-201ENST00000277817 NCKAP5LQ9HCH0 1330 aa4.51□□□□□ -1.69
HERC4-201ENST00000277817 APBB1O00213 710 aa4.51□□□□□ -1.69
HERC4-201ENST00000277817 PDE4DQ08499 809 aa4.51□□□□□ -1.69
HERC4-201ENST00000277817 FAM117AQ9C073 453 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms