RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 UGGT2Q9NYU1 1516 aa21.52■■□□□ 1.04
CTDSP1-201ENST00000273062 FBLN2P98095 1184 aa21.52■■□□□ 1.04
CTDSP1-201ENST00000273062 EHBP1L1Q8N3D4 1523 aa21.51■■□□□ 1.03
CTDSP1-201ENST00000273062 MYOM3Q5VTT5 1437 aa21.5■■□□□ 1.03
CTDSP1-201ENST00000273062 EPRSP07814 1512 aaKnown RBP21.5■■□□□ 1.03
CTDSP1-201ENST00000273062 HECW1Q76N89 1606 aa21.5■■□□□ 1.03
CTDSP1-201ENST00000273062 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
CTDSP1-201ENST00000273062 KIAA0586Q9BVV6 1533 aa21.5■■□□□ 1.03
CTDSP1-201ENST00000273062 SUPT6HQ7KZ85 1726 aaKnown RBP21.5■■□□□ 1.03
CTDSP1-201ENST00000273062 C11orf95C9JLR9 678 aaPredicted RBP21.49■■□□□ 1.03
CTDSP1-201ENST00000273062 PLEKHG5O94827 1062 aa21.49■■□□□ 1.03
CTDSP1-201ENST00000273062 ANP32AP39687 249 aaKnown RBP21.49■■□□□ 1.03
CTDSP1-201ENST00000273062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.49■■□□□ 1.038e-9■■■■■ 55.4
CTDSP1-201ENST00000273062 CCDC18Q5T9S5 1454 aa21.48■■□□□ 1.03
CTDSP1-201ENST00000273062 SIN3AQ96ST3 1273 aa21.48■■□□□ 1.03
CTDSP1-201ENST00000273062 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
CTDSP1-201ENST00000273062 LAS1LQ9Y4W2 734 aaKnown RBP21.47■■□□□ 1.03
CTDSP1-201ENST00000273062 KIAA0556O60303 1618 aa21.46■■□□□ 1.03
CTDSP1-201ENST00000273062 WASHC2CQ9Y4E1 1318 aa21.45■■□□□ 1.02
CTDSP1-201ENST00000273062 ARHGEF11O15085 1522 aa21.44■■□□□ 1.02
CTDSP1-201ENST00000273062 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
CTDSP1-201ENST00000273062 NEFMP07197 916 aa21.44■■□□□ 1.02
CTDSP1-201ENST00000273062 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
CTDSP1-201ENST00000273062 PTPN23Q9H3S7 1636 aa21.41■■□□□ 1.02
CTDSP1-201ENST00000273062 SYNJ2O15056 1496 aa21.41■■□□□ 1.02
CTDSP1-201ENST00000273062 CHIC2Q9UKJ5 165 aa21.38■■□□□ 1.01
CTDSP1-201ENST00000273062 NUP153P49790 1475 aaKnown RBP21.37■■□□□ 1.01
CTDSP1-201ENST00000273062 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
CTDSP1-201ENST00000273062 NAIPQ13075 1403 aa21.34■■□□□ 1.01
CTDSP1-201ENST00000273062 RRP7BPQ9NSQ0 103 aa21.34■■□□□ 1.01
CTDSP1-201ENST00000273062 RAPGEF6Q8TEU7 1601 aa21.32■■□□□ 1
CTDSP1-201ENST00000273062 PLB1Q6P1J6 1458 aa21.32■■□□□ 1
CTDSP1-201ENST00000273062 NPM2Q86SE8 214 aaKnown RBP21.31■■□□□ 1
CTDSP1-201ENST00000273062 TCOF1Q13428 1488 aaKnown RBP21.3■■□□□ 1
CTDSP1-201ENST00000273062 ZMYND15Q9H091 742 aa21.29■■□□□ 1
CTDSP1-201ENST00000273062 NUP160Q12769 1436 aa21.29■■□□□ 1
CTDSP1-201ENST00000273062 JPH4Q96JJ6 628 aa21.29■■□□□ 1
CTDSP1-201ENST00000273062 ZNF644Q9H582 1327 aaPredicted RBP21.27■□□□□ 0.99
CTDSP1-201ENST00000273062 CCDC184Q52MB2 194 aa21.26■□□□□ 0.99
CTDSP1-201ENST00000273062 PRG4Q92954 1404 aaPredicted RBP21.26■□□□□ 0.99
CTDSP1-201ENST00000273062 USP35Q9P2H5 1018 aa21.25■□□□□ 0.99
CTDSP1-201ENST00000273062 UACAQ9BZF9 1416 aa21.25■□□□□ 0.99
CTDSP1-201ENST00000273062 PODXL2Q9NZ53 605 aa21.25■□□□□ 0.99
CTDSP1-201ENST00000273062 VSIG10Q8N0Z9 540 aa21.24■□□□□ 0.99
CTDSP1-201ENST00000273062 RSPH6AQ9H0K4 717 aa21.24■□□□□ 0.99
CTDSP1-201ENST00000273062 KDM6BO15054 1643 aa21.23■□□□□ 0.99
CTDSP1-201ENST00000273062 MIA2Q96PC5 1412 aa21.22■□□□□ 0.99
CTDSP1-201ENST00000273062 GSE1Q14687 1217 aa21.21■□□□□ 0.99
CTDSP1-201ENST00000273062 CARMIL2Q6F5E8 1435 aa21.19■□□□□ 0.98
CTDSP1-201ENST00000273062 FRAT1Q92837 279 aaPredicted RBP21.17■□□□□ 0.98
CTDSP1-201ENST00000273062 GCC2Q8IWJ2 1684 aa21.15■□□□□ 0.98
CTDSP1-201ENST00000273062 KIF14Q15058 1648 aa21.15■□□□□ 0.98
CTDSP1-201ENST00000273062 DENND4BO75064 1496 aaPredicted RBP21.14■□□□□ 0.98
CTDSP1-201ENST00000273062 DAPK1P53355 1430 aa21.14■□□□□ 0.98
CTDSP1-201ENST00000273062 TROQ12816 1431 aaPredicted RBP21.14■□□□□ 0.98
CTDSP1-201ENST00000273062 ABCC5O15440 1437 aa21.13■□□□□ 0.97
CTDSP1-201ENST00000273062 FAM9BQ8IZU0 186 aa21.13■□□□□ 0.97
CTDSP1-201ENST00000273062 AKNAQ7Z591 1439 aa21.12■□□□□ 0.97
CTDSP1-201ENST00000273062 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
CTDSP1-201ENST00000273062 FOXD1Q16676 465 aa21.1■□□□□ 0.97
CTDSP1-201ENST00000273062 ZNF777Q9ULD5 760 aaPredicted RBP21.1■□□□□ 0.97
CTDSP1-201ENST00000273062 DCAF11Q8TEB1 546 aa21.09■□□□□ 0.97
CTDSP1-201ENST00000273062 CFDP1Q9UEE9 299 aaPredicted RBP21.08■□□□□ 0.97
CTDSP1-201ENST00000273062 PPM1GO15355 546 aaPredicted RBP21.08■□□□□ 0.97
CTDSP1-201ENST00000273062 ABCA8O94911 1581 aa21.08■□□□□ 0.97
CTDSP1-201ENST00000273062 DNMT1P26358 1616 aaKnown RBP21.08■□□□□ 0.96
CTDSP1-201ENST00000273062 GPATCH8Q9UKJ3 1502 aaKnown RBP21.07■□□□□ 0.96
CTDSP1-201ENST00000273062 GLIPR1L2Q4G1C9 344 aa21.07■□□□□ 0.96
CTDSP1-201ENST00000273062 CAMSAP2Q08AD1 1489 aa21.06■□□□□ 0.96
CTDSP1-201ENST00000273062 FAM43AQ8N2R8 423 aa21.06■□□□□ 0.96
CTDSP1-201ENST00000273062 CHD1O14646 1710 aa21.06■□□□□ 0.96
CTDSP1-201ENST00000273062 ATP10BO94823 1461 aa21.06■□□□□ 0.96
CTDSP1-201ENST00000273062 ZBED9Q6R2W3 1325 aa21.05■□□□□ 0.96
CTDSP1-201ENST00000273062 MPHOSPH9Q99550 1183 aa21.05■□□□□ 0.96
CTDSP1-201ENST00000273062 NFKBIBQ15653 356 aa21.04■□□□□ 0.96
CTDSP1-201ENST00000273062 KDM5BQ9UGL1 1544 aa21.03■□□□□ 0.96
CTDSP1-201ENST00000273062 ADCY10Q96PN6 1610 aa21.01■□□□□ 0.95
CTDSP1-201ENST00000273062 ROCK1Q13464 1354 aa21.01■□□□□ 0.95
CTDSP1-201ENST00000273062 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
CTDSP1-201ENST00000273062 PTPRGP23470 1445 aa21■□□□□ 0.95
CTDSP1-201ENST00000273062 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
CTDSP1-201ENST00000273062 SENP3-EIF4A1A0A087X0R7 540 aa20.98■□□□□ 0.95
CTDSP1-201ENST00000273062 PDE4AP27815 886 aa20.98■□□□□ 0.95
CTDSP1-201ENST00000273062 SLC4A3P48751 1232 aa20.97■□□□□ 0.95
CTDSP1-201ENST00000273062 RRAGDQ9NQL2 400 aaPredicted RBP20.96■□□□□ 0.95
CTDSP1-201ENST00000273062 ERCC6L2Q5T890 1561 aa20.96■□□□□ 0.95
CTDSP1-201ENST00000273062 ABCC10Q5T3U5 1492 aa20.95■□□□□ 0.94
CTDSP1-201ENST00000273062 MRS2Q9HD23 443 aa20.95■□□□□ 0.94
CTDSP1-201ENST00000273062 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
CTDSP1-201ENST00000273062 SLC24A1O60721 1099 aa20.93■□□□□ 0.94
CTDSP1-201ENST00000273062 NCOA1Q15788 1441 aa20.93■□□□□ 0.94
CTDSP1-201ENST00000273062 BACH2Q9BYV9 841 aa20.91■□□□□ 0.94
CTDSP1-201ENST00000273062 SLC4A1APQ9BWU0 796 aaKnown RBP20.91■□□□□ 0.94
CTDSP1-201ENST00000273062 RNF123Q5XPI4 1314 aa20.9■□□□□ 0.94
CTDSP1-201ENST00000273062 CROCC2H7BZ55 1655 aa20.89■□□□□ 0.93
CTDSP1-201ENST00000273062 L3MBTL2Q969R5 705 aa20.88■□□□□ 0.93
CTDSP1-201ENST00000273062 ANKRD30BQ9BXX2 1392 aa20.88■□□□□ 0.93
CTDSP1-201ENST00000273062 PRKRIP1Q9H875 184 aaPredicted RBP20.87■□□□□ 0.93
CTDSP1-201ENST00000273062 SHROOM2Q13796 1616 aa20.87■□□□□ 0.93
CTDSP1-201ENST00000273062 SMG6Q86US8 1419 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms