RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 TSPY10P0CW01 314 aa13.38□□□□□ -0.27
OTOF-201ENST00000272371 ZNF771Q7L3S4 317 aaPredicted RBP13.38□□□□□ -0.27
OTOF-201ENST00000272371 MTUS2Q5JR59 1369 aa13.38□□□□□ -0.27
OTOF-201ENST00000272371 TIMELESSQ9UNS1 1208 aa13.38□□□□□ -0.27
OTOF-201ENST00000272371 PLEKHD1A6NEE1 506 aa13.37□□□□□ -0.27
OTOF-201ENST00000272371 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
OTOF-201ENST00000272371 USP35Q9P2H5 1018 aa13.36□□□□□ -0.27
OTOF-201ENST00000272371 OS9Q13438 667 aaPredicted RBP13.36□□□□□ -0.27
OTOF-201ENST00000272371 CDCA8Q53HL2 280 aa13.35□□□□□ -0.27
OTOF-201ENST00000272371 CCER2I3L3R5 266 aa13.35□□□□□ -0.27
OTOF-201ENST00000272371 PDS5BQ9NTI5 1447 aa13.34□□□□□ -0.27
OTOF-201ENST00000272371 MYO15BQ96JP2 1530 aa13.34□□□□□ -0.27
OTOF-201ENST00000272371 TPM4P67936 248 aa13.34□□□□□ -0.27
OTOF-201ENST00000272371 A0A0U1RQG5 324 aaPredicted RBP13.33□□□□□ -0.27
OTOF-201ENST00000272371 WRNQ14191 1432 aaPredicted RBP eCLIP13.33□□□□□ -0.28
OTOF-201ENST00000272371 CALD1Q05682 793 aaKnown RBP13.32□□□□□ -0.28
OTOF-201ENST00000272371 GSE1Q14687 1217 aa13.32□□□□□ -0.28
OTOF-201ENST00000272371 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
OTOF-201ENST00000272371 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
OTOF-201ENST00000272371 PKNOX2Q96KN3 472 aa13.32□□□□□ -0.28
OTOF-201ENST00000272371 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
OTOF-201ENST00000272371 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
OTOF-201ENST00000272371 HTATSF1O43719 755 aaKnown RBP13.29□□□□□ -0.28
OTOF-201ENST00000272371 GNL2Q13823 731 aaKnown RBP13.29□□□□□ -0.28
OTOF-201ENST00000272371 CLIP1P30622 1438 aa13.29□□□□□ -0.28
OTOF-201ENST00000272371 NUDCQ9Y266 331 aa13.29□□□□□ -0.28
OTOF-201ENST00000272371 PHF14O94880 888 aa13.29□□□□□ -0.28
OTOF-201ENST00000272371 KIF27Q86VH2 1401 aa13.29□□□□□ -0.28
OTOF-201ENST00000272371 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.28
OTOF-201ENST00000272371 SMARCA2P51531 1590 aa13.27□□□□□ -0.28
OTOF-201ENST00000272371 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
OTOF-201ENST00000272371 CLSTN1O94985 981 aa13.26□□□□□ -0.29
OTOF-201ENST00000272371 CSPP1Q1MSJ5 1256 aa13.26□□□□□ -0.29
OTOF-201ENST00000272371 MFAP1P55081 439 aaKnown RBP13.24□□□□□ -0.29
OTOF-201ENST00000272371 RGL3Q3MIN7 710 aa13.24□□□□□ -0.29
OTOF-201ENST00000272371 FAM13BQ9NYF5 915 aa13.24□□□□□ -0.29
OTOF-201ENST00000272371 APPP05067 770 aa13.24□□□□□ -0.29
OTOF-201ENST00000272371 PODXL2Q9NZ53 605 aa13.24□□□□□ -0.29
OTOF-201ENST00000272371 RCAN3Q9UKA8 241 aa13.24□□□□□ -0.29
OTOF-201ENST00000272371 KIAA1211Q6ZU35 1233 aa13.24□□□□□ -0.29
OTOF-201ENST00000272371 GPS2Q13227 327 aa13.23□□□□□ -0.29
OTOF-201ENST00000272371 TEX35Q5T0J7 233 aa13.23□□□□□ -0.29
OTOF-201ENST00000272371 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
OTOF-201ENST00000272371 WIZO95785 1651 aa13.22□□□□□ -0.29
OTOF-201ENST00000272371 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
OTOF-201ENST00000272371 MROH2BQ7Z745 1585 aa13.21□□□□□ -0.29
OTOF-201ENST00000272371 FAM69CQ0P6D2 419 aa13.21□□□□□ -0.29
OTOF-201ENST00000272371 SIN3AQ96ST3 1273 aa13.21□□□□□ -0.29
OTOF-201ENST00000272371 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
OTOF-201ENST00000272371 SF3B2Q13435 895 aaKnown RBP13.21□□□□□ -0.3
OTOF-201ENST00000272371 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
OTOF-201ENST00000272371 PMFBP1Q8TBY8 1022 aa13.2□□□□□ -0.3
OTOF-201ENST00000272371 CUX2O14529 1486 aa13.19□□□□□ -0.3
OTOF-201ENST00000272371 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
OTOF-201ENST00000272371 TPM3P06753 285 aa13.19□□□□□ -0.3
OTOF-201ENST00000272371 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
OTOF-201ENST00000272371 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.19□□□□□ -0.3
OTOF-201ENST00000272371 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
OTOF-201ENST00000272371 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
OTOF-201ENST00000272371 CFDP1Q9UEE9 299 aaPredicted RBP13.18□□□□□ -0.3
OTOF-201ENST00000272371 SKOR2Q2VWA4 1001 aaPredicted RBP13.18□□□□□ -0.3
OTOF-201ENST00000272371 GOLGA3Q08378 1498 aa13.18□□□□□ -0.3
OTOF-201ENST00000272371 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
OTOF-201ENST00000272371 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
OTOF-201ENST00000272371 KLHL34Q8N239 644 aa13.17□□□□□ -0.3
OTOF-201ENST00000272371 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
OTOF-201ENST00000272371 APBB1O00213 710 aa13.16□□□□□ -0.3
OTOF-201ENST00000272371 CCAR2Q8N163 923 aaKnown RBP13.16□□□□□ -0.3
OTOF-201ENST00000272371 CCDC88BA6NC98 1476 aa13.15□□□□□ -0.3
OTOF-201ENST00000272371 IPO8O15397 1037 aaKnown RBP13.15□□□□□ -0.3
OTOF-201ENST00000272371 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
OTOF-201ENST00000272371 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
OTOF-201ENST00000272371 ZNF592Q92610 1267 aa13.14□□□□□ -0.31
OTOF-201ENST00000272371 FAM43AQ8N2R8 423 aa13.14□□□□□ -0.31
OTOF-201ENST00000272371 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
OTOF-201ENST00000272371 SOGA1O94964 1423 aa13.13□□□□□ -0.31
OTOF-201ENST00000272371 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
OTOF-201ENST00000272371 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
OTOF-201ENST00000272371 PDE4CQ08493 712 aa13.12□□□□□ -0.31
OTOF-201ENST00000272371 ST18O60284 1047 aa13.12□□□□□ -0.31
OTOF-201ENST00000272371 MTERF4Q7Z6M4 381 aaKnown RBP13.12□□□□□ -0.31
OTOF-201ENST00000272371 MAP7D2Q96T17 732 aa13.12□□□□□ -0.31
OTOF-201ENST00000272371 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
OTOF-201ENST00000272371 TMF1P82094 1093 aa13.11□□□□□ -0.31
OTOF-201ENST00000272371 CCDC70Q6NSX1 233 aa13.11□□□□□ -0.31
OTOF-201ENST00000272371 FOXD4L5Q5VV16 416 aaPredicted RBP13.11□□□□□ -0.31
OTOF-201ENST00000272371 FOXD4L4Q8WXT5 416 aaPredicted RBP13.11□□□□□ -0.31
OTOF-201ENST00000272371 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
OTOF-201ENST00000272371 CREBRFQ8IUR6 639 aa13.11□□□□□ -0.31
OTOF-201ENST00000272371 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
OTOF-201ENST00000272371 EID1Q9Y6B2 187 aa13.11□□□□□ -0.31
OTOF-201ENST00000272371 CARMIL1Q5VZK9 1371 aa13.11□□□□□ -0.31
OTOF-201ENST00000272371 GOLGA6L19H0YKK7 550 aa13.11□□□□□ -0.31
OTOF-201ENST00000272371 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
OTOF-201ENST00000272371 NOL8Q76FK4 1167 aaKnown RBP13.09□□□□□ -0.31
OTOF-201ENST00000272371 EEA1Q15075 1411 aa13.09□□□□□ -0.31
OTOF-201ENST00000272371 PDE4AP27815 886 aa13.09□□□□□ -0.31
OTOF-201ENST00000272371 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
OTOF-201ENST00000272371 GGT6Q6P531 493 aa13.08□□□□□ -0.32
OTOF-201ENST00000272371 FAM161AQ3B820 660 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms