RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
LAMA3-201ENST00000269217 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
LAMA3-201ENST00000269217 L1TD1Q5T7N2 865 aaKnown RBP13.04□□□□□ -0.32
LAMA3-201ENST00000269217 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
LAMA3-201ENST00000269217 RCAN3Q9UKA8 241 aa13.03□□□□□ -0.32
LAMA3-201ENST00000269217 KCNJ4P48050 445 aa13.03□□□□□ -0.32
LAMA3-201ENST00000269217 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
LAMA3-201ENST00000269217 FGD1P98174 961 aa13.03□□□□□ -0.32
LAMA3-201ENST00000269217 PLCB2Q00722 1185 aa13.03□□□□□ -0.32
LAMA3-201ENST00000269217 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
LAMA3-201ENST00000269217 ROCK2O75116 1388 aaKnown RBP13.02□□□□□ -0.32
LAMA3-201ENST00000269217 GOLGA6L6A8MZA4 724 aa13.02□□□□□ -0.32
LAMA3-201ENST00000269217 FOXD1Q16676 465 aa13.02□□□□□ -0.32
LAMA3-201ENST00000269217 LMOD2Q6P5Q4 547 aa13.02□□□□□ -0.33
LAMA3-201ENST00000269217 MCCP23508 829 aa13.02□□□□□ -0.33
LAMA3-201ENST00000269217 DEKP35659 375 aaKnown RBP13.02□□□□□ -0.33
LAMA3-201ENST00000269217 IPO8O15397 1037 aaKnown RBP13.01□□□□□ -0.33
LAMA3-201ENST00000269217 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
LAMA3-201ENST00000269217 ANKRD30AQ9BXX3 1397 aa13.01□□□□□ -0.33
LAMA3-201ENST00000269217 NUP155O75694 1391 aa13□□□□□ -0.33
LAMA3-201ENST00000269217 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
LAMA3-201ENST00000269217 NRDCO43847 1150 aa12.99□□□□□ -0.33
LAMA3-201ENST00000269217 HDGFL2Q7Z4V5 671 aaPredicted RBP12.98□□□□□ -0.33
LAMA3-201ENST00000269217 GOLGA6L4A6NEF3 574 aa12.98□□□□□ -0.33
LAMA3-201ENST00000269217 CALD1Q05682 793 aaKnown RBP12.97□□□□□ -0.33
LAMA3-201ENST00000269217 RWDD1Q9H446 243 aaPredicted RBP12.97□□□□□ -0.33
LAMA3-201ENST00000269217 SAFB2Q14151 953 aaKnown RBP eCLIP12.96□□□□□ -0.33
LAMA3-201ENST00000269217 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
LAMA3-201ENST00000269217 EIF3AQ14152 1382 aaKnown RBP12.96□□□□□ -0.34
LAMA3-201ENST00000269217 PTMSP20962 102 aa12.95□□□□□ -0.34
LAMA3-201ENST00000269217 PDS5BQ9NTI5 1447 aa12.95□□□□□ -0.34
LAMA3-201ENST00000269217 MSNP26038 577 aaKnown RBP12.95□□□□□ -0.34
LAMA3-201ENST00000269217 NAP1L2Q9ULW6 460 aaPredicted RBP12.95□□□□□ -0.34
LAMA3-201ENST00000269217 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
LAMA3-201ENST00000269217 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
LAMA3-201ENST00000269217 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
LAMA3-201ENST00000269217 GGT6Q6P531 493 aa12.94□□□□□ -0.34
LAMA3-201ENST00000269217 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
LAMA3-201ENST00000269217 RAPGEF2Q9Y4G8 1499 aa12.94□□□□□ -0.34
LAMA3-201ENST00000269217 CHAF1AQ13111 956 aaPredicted RBP12.94□□□□□ -0.34
LAMA3-201ENST00000269217 GBP4Q96PP9 640 aa12.93□□□□□ -0.34
LAMA3-201ENST00000269217 PDE3BQ13370 1112 aa12.93□□□□□ -0.34
LAMA3-201ENST00000269217 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
LAMA3-201ENST00000269217 WIZO95785 1651 aa12.93□□□□□ -0.34
LAMA3-201ENST00000269217 PMFBP1Q8TBY8 1022 aa12.93□□□□□ -0.34
LAMA3-201ENST00000269217 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
LAMA3-201ENST00000269217 SOX12O15370 315 aa12.92□□□□□ -0.34
LAMA3-201ENST00000269217 TDRD9Q8NDG6 1382 aaKnown RBP12.92□□□□□ -0.34
LAMA3-201ENST00000269217 NLRP13Q86W25 1043 aa12.92□□□□□ -0.34
LAMA3-201ENST00000269217 STK26Q9P289 416 aa12.92□□□□□ -0.34
LAMA3-201ENST00000269217 ITPRIPQ8IWB1 547 aa12.92□□□□□ -0.34
LAMA3-201ENST00000269217 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
LAMA3-201ENST00000269217 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
LAMA3-201ENST00000269217 CCDC18Q5T9S5 1454 aa12.9□□□□□ -0.34
LAMA3-201ENST00000269217 FHOD3Q2V2M9 1422 aa12.9□□□□□ -0.34
LAMA3-201ENST00000269217 PHLDB1Q86UU1 1377 aa12.9□□□□□ -0.34
LAMA3-201ENST00000269217 MLECQ14165 292 aa12.9□□□□□ -0.35
LAMA3-201ENST00000269217 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
LAMA3-201ENST00000269217 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
LAMA3-201ENST00000269217 NPHP1O15259 732 aa12.89□□□□□ -0.35
LAMA3-201ENST00000269217 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
LAMA3-201ENST00000269217 DHX57Q6P158 1386 aaKnown RBP12.88□□□□□ -0.35
LAMA3-201ENST00000269217 APBB1O00213 710 aa12.87□□□□□ -0.35
LAMA3-201ENST00000269217 SLKQ9H2G2 1235 aaPredicted RBP12.87□□□□□ -0.35
LAMA3-201ENST00000269217 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
LAMA3-201ENST00000269217 CHMP4AQ9BY43 222 aa12.86□□□□□ -0.35
LAMA3-201ENST00000269217 DRC7Q8IY82 874 aa12.86□□□□□ -0.35
LAMA3-201ENST00000269217 SMC4Q9NTJ3 1288 aa12.86□□□□□ -0.35
LAMA3-201ENST00000269217 TERF2IPQ9NYB0 399 aa12.85□□□□□ -0.35
LAMA3-201ENST00000269217 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
LAMA3-201ENST00000269217 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
LAMA3-201ENST00000269217 HNRNPMP52272 730 aaKnown RBP eCLIP12.83□□□□□ -0.36
LAMA3-201ENST00000269217 CADPSQ9ULU8 1353 aa12.83□□□□□ -0.36
LAMA3-201ENST00000269217 SPAG9O60271 1321 aaKnown RBP12.83□□□□□ -0.36
LAMA3-201ENST00000269217 KIF3BO15066 747 aa12.83□□□□□ -0.36
LAMA3-201ENST00000269217 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.36
LAMA3-201ENST00000269217 SYAP1Q96A49 352 aaPredicted RBP12.83□□□□□ -0.36
LAMA3-201ENST00000269217 TULP1O00294 542 aaPredicted RBP12.83□□□□□ -0.36
LAMA3-201ENST00000269217 STK31Q9BXU1 1019 aa12.83□□□□□ -0.36
LAMA3-201ENST00000269217 HMMRO75330 724 aa12.82□□□□□ -0.36
LAMA3-201ENST00000269217 HTATSF1O43719 755 aaKnown RBP12.82□□□□□ -0.36
LAMA3-201ENST00000269217 GZF1Q9H116 711 aaPredicted RBP12.82□□□□□ -0.36
LAMA3-201ENST00000269217 KIAA2012Q0VF49 1180 aa12.81□□□□□ -0.36
LAMA3-201ENST00000269217 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
LAMA3-201ENST00000269217 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
LAMA3-201ENST00000269217 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
LAMA3-201ENST00000269217 GOLGA6L3A6NEY3 463 aa12.8□□□□□ -0.36
LAMA3-201ENST00000269217 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
LAMA3-201ENST00000269217 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
LAMA3-201ENST00000269217 CCDC144AA2RUR9 1427 aa12.78□□□□□ -0.36
LAMA3-201ENST00000269217 PAK3O75914 559 aaPredicted RBP12.78□□□□□ -0.36
LAMA3-201ENST00000269217 PRKRIP1Q9H875 184 aaPredicted RBP12.78□□□□□ -0.36
LAMA3-201ENST00000269217 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
LAMA3-201ENST00000269217 GPATCH3Q96I76 525 aa12.78□□□□□ -0.36
LAMA3-201ENST00000269217 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.36
LAMA3-201ENST00000269217 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.36
LAMA3-201ENST00000269217 PANK3Q9H999 370 aa12.76□□□□□ -0.37
LAMA3-201ENST00000269217 SMARCA4P51532 1647 aa12.76□□□□□ -0.37
LAMA3-201ENST00000269217 ATAD2BQ9ULI0 1458 aa12.76□□□□□ -0.37
LAMA3-201ENST00000269217 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms