RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 MAP3K1Q13233 1512 aa19.92■□□□□ 0.78
SGCE-201ENST00000265735 RICTORQ6R327 1708 aa19.92■□□□□ 0.78
SGCE-201ENST00000265735 RAPGEF3O95398 923 aa19.91■□□□□ 0.78
SGCE-201ENST00000265735 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
SGCE-201ENST00000265735 ARHGAP5Q13017 1502 aa19.91■□□□□ 0.78
SGCE-201ENST00000265735 ADGRL1O94910 1474 aa19.89■□□□□ 0.77
SGCE-201ENST00000265735 GPATCH8Q9UKJ3 1502 aaKnown RBP19.89■□□□□ 0.77
SGCE-201ENST00000265735 SCAPERQ9BY12 1400 aa19.87■□□□□ 0.77
SGCE-201ENST00000265735 LRRC9Q6ZRR7 1453 aa19.85■□□□□ 0.77
SGCE-201ENST00000265735 ZMYM4Q5VZL5 1548 aa19.84■□□□□ 0.77
SGCE-201ENST00000265735 POGZQ7Z3K3 1410 aa19.84■□□□□ 0.77
SGCE-201ENST00000265735 SUPT6HQ7KZ85 1726 aaKnown RBP19.84■□□□□ 0.77
SGCE-201ENST00000265735 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.76
SGCE-201ENST00000265735 ABCC1P33527 1531 aa19.82■□□□□ 0.76
SGCE-201ENST00000265735 NCOA2Q15596 1464 aa19.81■□□□□ 0.76
SGCE-201ENST00000265735 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
SGCE-201ENST00000265735 SAMD9LQ8IVG5 1584 aa19.8■□□□□ 0.76
SGCE-201ENST00000265735 ITSN2Q9NZM3 1697 aa19.8■□□□□ 0.76
SGCE-201ENST00000265735 ARHGEF12Q9NZN5 1544 aa19.8■□□□□ 0.76
SGCE-201ENST00000265735 MAGI2Q86UL8 1455 aa19.79■□□□□ 0.76
SGCE-201ENST00000265735 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
SGCE-201ENST00000265735 CFDP1Q9UEE9 299 aaPredicted RBP19.78■□□□□ 0.76
SGCE-201ENST00000265735 KDM5CP41229 1560 aa19.78■□□□□ 0.76
SGCE-201ENST00000265735 ARHGEF40Q8TER5 1519 aa19.77■□□□□ 0.75
SGCE-201ENST00000265735 KDM4FA0A1W2PPD8 638 aa19.75■□□□□ 0.75
SGCE-201ENST00000265735 AFAP1Q8N556 730 aa19.75■□□□□ 0.75
SGCE-201ENST00000265735 KIAA1107Q9UPP5 1409 aa19.75■□□□□ 0.75
SGCE-201ENST00000265735 APLP2Q06481 763 aa19.75■□□□□ 0.75
SGCE-201ENST00000265735 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
SGCE-201ENST00000265735 ZFYVE16Q7Z3T8 1539 aa19.74■□□□□ 0.75
SGCE-201ENST00000265735 ZNF777Q9ULD5 760 aaPredicted RBP19.74■□□□□ 0.75
SGCE-201ENST00000265735 PLEKHH2Q8IVE3 1493 aa19.73■□□□□ 0.75
SGCE-201ENST00000265735 YEATS2Q9ULM3 1422 aa19.73■□□□□ 0.75
SGCE-201ENST00000265735 SYCP2Q9BX26 1530 aa19.72■□□□□ 0.75
SGCE-201ENST00000265735 MLH3Q9UHC1 1453 aa19.71■□□□□ 0.75
SGCE-201ENST00000265735 HECW2Q9P2P5 1572 aa19.7■□□□□ 0.74
SGCE-201ENST00000265735 HNRNPMP52272 730 aaKnown RBP eCLIP19.69■□□□□ 0.745e-8■■■■■ 27.1
SGCE-201ENST00000265735 ZNF644Q9H582 1327 aaPredicted RBP19.69■□□□□ 0.74
SGCE-201ENST00000265735 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
SGCE-201ENST00000265735 MBD5Q9P267 1494 aa19.67■□□□□ 0.74
SGCE-201ENST00000265735 SIGLEC1Q9BZZ2 1709 aa19.66■□□□□ 0.74
SGCE-201ENST00000265735 KIDINS220Q9ULH0 1771 aa19.66■□□□□ 0.74
SGCE-201ENST00000265735 ATP10AO60312 1499 aa19.66■□□□□ 0.74
SGCE-201ENST00000265735 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
SGCE-201ENST00000265735 DIP2CQ9Y2E4 1556 aa19.64■□□□□ 0.74
SGCE-201ENST00000265735 MIA2Q96PC5 1412 aa19.64■□□□□ 0.73
SGCE-201ENST00000265735 CAMSAP2Q08AD1 1489 aa19.64■□□□□ 0.73
SGCE-201ENST00000265735 ABCA6Q8N139 1617 aa19.64■□□□□ 0.73
SGCE-201ENST00000265735 BCORL1Q5H9F3 1711 aa19.63■□□□□ 0.73
SGCE-201ENST00000265735 C9orf84Q5VXU9 1444 aa19.63■□□□□ 0.73
SGCE-201ENST00000265735 REREQ9P2R6 1566 aa19.62■□□□□ 0.73
SGCE-201ENST00000265735 ADAMTSL3P82987 1691 aa19.62■□□□□ 0.73
SGCE-201ENST00000265735 INO80Q9ULG1 1556 aaPredicted RBP19.61■□□□□ 0.73
SGCE-201ENST00000265735 SPAG9O60271 1321 aaKnown RBP19.6■□□□□ 0.73
SGCE-201ENST00000265735 RSPH4AQ5TD94 716 aa19.59■□□□□ 0.73
SGCE-201ENST00000265735 ARHGEF5Q12774 1597 aa19.59■□□□□ 0.73
SGCE-201ENST00000265735 ATP7AQ04656 1500 aa19.59■□□□□ 0.73
SGCE-201ENST00000265735 ARID4BQ4LE39 1312 aaPredicted RBP19.59■□□□□ 0.73
SGCE-201ENST00000265735 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
SGCE-201ENST00000265735 CCDC141Q6ZP82 1450 aa19.57■□□□□ 0.72
SGCE-201ENST00000265735 RTEL1-TNFRSF6BF6WH68 1400 aa19.56■□□□□ 0.72
SGCE-201ENST00000265735 AGLP35573 1532 aa19.55■□□□□ 0.72
SGCE-201ENST00000265735 PTPN23Q9H3S7 1636 aa19.54■□□□□ 0.72
SGCE-201ENST00000265735 FGD6Q6ZV73 1430 aa19.53■□□□□ 0.72
SGCE-201ENST00000265735 MADDQ8WXG6 1647 aa19.52■□□□□ 0.72
SGCE-201ENST00000265735 TCOF1Q13428 1488 aaKnown RBP19.52■□□□□ 0.72
SGCE-201ENST00000265735 PLXNC1O60486 1568 aa19.51■□□□□ 0.71
SGCE-201ENST00000265735 ADGBQ8N7X0 1667 aa19.51■□□□□ 0.71
SGCE-201ENST00000265735 MAST1Q9Y2H9 1570 aa19.5■□□□□ 0.71
SGCE-201ENST00000265735 A2MP01023 1474 aa19.49■□□□□ 0.71
SGCE-201ENST00000265735 PTPRMP28827 1452 aa19.48■□□□□ 0.71
SGCE-201ENST00000265735 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
SGCE-201ENST00000265735 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
SGCE-201ENST00000265735 MLECQ14165 292 aa19.47■□□□□ 0.71
SGCE-201ENST00000265735 FER1L4A9Z1Z3 1794 aa19.47■□□□□ 0.71
SGCE-201ENST00000265735 RIMS1Q86UR5 1692 aaKnown RBP19.46■□□□□ 0.71
SGCE-201ENST00000265735 ABCC5O15440 1437 aa19.44■□□□□ 0.7
SGCE-201ENST00000265735 DNMT1P26358 1616 aaKnown RBP19.44■□□□□ 0.7
SGCE-201ENST00000265735 CROCC2H7BZ55 1655 aa19.44■□□□□ 0.7
SGCE-201ENST00000265735 DHX29Q7Z478 1369 aaKnown RBP19.43■□□□□ 0.7
SGCE-201ENST00000265735 SHANK2Q9UPX8 1470 aa19.42■□□□□ 0.7
SGCE-201ENST00000265735 PCGF6Q9BYE7 350 aa19.42■□□□□ 0.7
SGCE-201ENST00000265735 DAPK1P53355 1430 aa19.42■□□□□ 0.7
SGCE-201ENST00000265735 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
SGCE-201ENST00000265735 PPARGC1BQ86YN6 1023 aaKnown RBP19.4■□□□□ 0.7
SGCE-201ENST00000265735 FAM50AQ14320 339 aaKnown RBP19.34■□□□□ 0.69
SGCE-201ENST00000265735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.34■□□□□ 0.69
SGCE-201ENST00000265735 CNTLNQ9NXG0 1405 aa19.34■□□□□ 0.69
SGCE-201ENST00000265735 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.69
SGCE-201ENST00000265735 DUOX2Q9NRD8 1548 aa19.33■□□□□ 0.68
SGCE-201ENST00000265735 MROH2AA6NES4 1674 aa19.32■□□□□ 0.68
SGCE-201ENST00000265735 EIF2AK4Q9P2K8 1649 aaKnown RBP19.32■□□□□ 0.68
SGCE-201ENST00000265735 KIF3BO15066 747 aa19.32■□□□□ 0.68
SGCE-201ENST00000265735 GGT6Q6P531 493 aa19.32■□□□□ 0.68
SGCE-201ENST00000265735 C3P01024 1663 aa19.32■□□□□ 0.68
SGCE-201ENST00000265735 ADGRL2O95490 1459 aa19.31■□□□□ 0.68
SGCE-201ENST00000265735 KIF15Q9NS87 1388 aa19.3■□□□□ 0.68
SGCE-201ENST00000265735 ESF1Q9H501 851 aaKnown RBP19.3■□□□□ 0.68
SGCE-201ENST00000265735 NCOA1Q15788 1441 aa19.3■□□□□ 0.68
SGCE-201ENST00000265735 ANKRD30AQ9BXX3 1397 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms