RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 NEO1Q92859 1461 aa22.22■■□□□ 1.15
SSBP1-201ENST00000265304 CCNB3Q8WWL7 1395 aa22.2■■□□□ 1.14
SSBP1-201ENST00000265304 CFAP74Q9C0B2 1584 aa22.19■■□□□ 1.14
SSBP1-201ENST00000265304 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
SSBP1-201ENST00000265304 FANCAO15360 1455 aa22.17■■□□□ 1.14
SSBP1-201ENST00000265304 MYOM3Q5VTT5 1437 aa22.17■■□□□ 1.14
SSBP1-201ENST00000265304 MIA2Q96PC5 1412 aa22.17■■□□□ 1.14
SSBP1-201ENST00000265304 EFCAB2Q5VUJ9 269 aa22.17■■□□□ 1.14
SSBP1-201ENST00000265304 ARHGAP5Q13017 1502 aa22.12■■□□□ 1.13
SSBP1-201ENST00000265304 CFDP1Q9UEE9 299 aaPredicted RBP22.12■■□□□ 1.13
SSBP1-201ENST00000265304 AKNAQ7Z591 1439 aa22.12■■□□□ 1.13
SSBP1-201ENST00000265304 KIAA1107Q9UPP5 1409 aa22.11■■□□□ 1.13
SSBP1-201ENST00000265304 SAMD9LQ8IVG5 1584 aa22.1■■□□□ 1.13
SSBP1-201ENST00000265304 PLEKHH2Q8IVE3 1493 aa22.09■■□□□ 1.13
SSBP1-201ENST00000265304 FGD6Q6ZV73 1430 aa22.08■■□□□ 1.13
SSBP1-201ENST00000265304 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.12
SSBP1-201ENST00000265304 ABCC1P33527 1531 aa22.06■■□□□ 1.12
SSBP1-201ENST00000265304 COL17A1Q9UMD9 1497 aaPredicted RBP22.06■■□□□ 1.12
SSBP1-201ENST00000265304 ADGRL1O94910 1474 aa22.04■■□□□ 1.12
SSBP1-201ENST00000265304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.04■■□□□ 1.12
SSBP1-201ENST00000265304 ARHGEF12Q9NZN5 1544 aa22.04■■□□□ 1.12
SSBP1-201ENST00000265304 MBD5Q9P267 1494 aa22.03■■□□□ 1.12
SSBP1-201ENST00000265304 RICTORQ6R327 1708 aa22.03■■□□□ 1.12
SSBP1-201ENST00000265304 PPARGC1BQ86YN6 1023 aaKnown RBP22.03■■□□□ 1.12
SSBP1-201ENST00000265304 PTPN23Q9H3S7 1636 aa22.02■■□□□ 1.12
SSBP1-201ENST00000265304 SCAPERQ9BY12 1400 aa22.02■■□□□ 1.12
SSBP1-201ENST00000265304 RRBP1Q9P2E9 1410 aaKnown RBP22.02■■□□□ 1.12
SSBP1-201ENST00000265304 CAMSAP2Q08AD1 1489 aa22.02■■□□□ 1.12
SSBP1-201ENST00000265304 ARHGEF5Q12774 1597 aa22.01■■□□□ 1.11
SSBP1-201ENST00000265304 ZNF644Q9H582 1327 aaPredicted RBP22.01■■□□□ 1.11
SSBP1-201ENST00000265304 RSPH4AQ5TD94 716 aa22■■□□□ 1.11
SSBP1-201ENST00000265304 DENND4BO75064 1496 aaPredicted RBP22■■□□□ 1.11
SSBP1-201ENST00000265304 FRMPD1Q5SYB0 1578 aa21.99■■□□□ 1.11
SSBP1-201ENST00000265304 KDM6BO15054 1643 aa21.98■■□□□ 1.11
SSBP1-201ENST00000265304 POGZQ7Z3K3 1410 aa21.98■■□□□ 1.11
SSBP1-201ENST00000265304 KDM5CP41229 1560 aa21.98■■□□□ 1.11
SSBP1-201ENST00000265304 ZMYM4Q5VZL5 1548 aa21.96■■□□□ 1.11
SSBP1-201ENST00000265304 SYCP2Q9BX26 1530 aa21.96■■□□□ 1.11
SSBP1-201ENST00000265304 ZNF518AQ6AHZ1 1483 aa21.96■■□□□ 1.11
SSBP1-201ENST00000265304 ZNF777Q9ULD5 760 aaPredicted RBP21.95■■□□□ 1.1
SSBP1-201ENST00000265304 TRAPPC8Q9Y2L5 1435 aa21.95■■□□□ 1.1
SSBP1-201ENST00000265304 HNRNPMP52272 730 aaKnown RBP eCLIP21.93■■□□□ 1.1
SSBP1-201ENST00000265304 MAGI2Q86UL8 1455 aa21.92■■□□□ 1.1
SSBP1-201ENST00000265304 MLH3Q9UHC1 1453 aa21.92■■□□□ 1.1
SSBP1-201ENST00000265304 DNMT1P26358 1616 aaKnown RBP21.91■■□□□ 1.1
SSBP1-201ENST00000265304 RAPGEF3O95398 923 aa21.91■■□□□ 1.1
SSBP1-201ENST00000265304 CCDC141Q6ZP82 1450 aa21.9■■□□□ 1.1
SSBP1-201ENST00000265304 AFAP1Q8N556 730 aa21.89■■□□□ 1.09
SSBP1-201ENST00000265304 MAST1Q9Y2H9 1570 aa21.89■■□□□ 1.09
SSBP1-201ENST00000265304 RTEL1-TNFRSF6BF6WH68 1400 aa21.89■■□□□ 1.09
SSBP1-201ENST00000265304 ABCC5O15440 1437 aa21.89■■□□□ 1.09
SSBP1-201ENST00000265304 CROCC2H7BZ55 1655 aa21.88■■□□□ 1.09
SSBP1-201ENST00000265304 SHANK2Q9UPX8 1470 aa21.87■■□□□ 1.09
SSBP1-201ENST00000265304 KIDINS220Q9ULH0 1771 aa21.87■■□□□ 1.09
SSBP1-201ENST00000265304 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
SSBP1-201ENST00000265304 INO80Q9ULG1 1556 aaPredicted RBP21.86■■□□□ 1.09
SSBP1-201ENST00000265304 DAPK1P53355 1430 aa21.85■■□□□ 1.09
SSBP1-201ENST00000265304 HECW2Q9P2P5 1572 aa21.85■■□□□ 1.09
SSBP1-201ENST00000265304 ZFYVE16Q7Z3T8 1539 aa21.81■■□□□ 1.08
SSBP1-201ENST00000265304 FAM50AQ14320 339 aaKnown RBP21.81■■□□□ 1.08
SSBP1-201ENST00000265304 SPAG9O60271 1321 aaKnown RBP21.8■■□□□ 1.08
SSBP1-201ENST00000265304 ATP7AQ04656 1500 aa21.8■■□□□ 1.08
SSBP1-201ENST00000265304 TSPY4P0CV99 314 aa21.8■■□□□ 1.08
SSBP1-201ENST00000265304 TSPY10P0CW01 314 aa21.8■■□□□ 1.08
SSBP1-201ENST00000265304 PTPRKQ15262 1439 aa21.8■■□□□ 1.08
SSBP1-201ENST00000265304 ADGRL2O95490 1459 aa21.79■■□□□ 1.08
SSBP1-201ENST00000265304 REREQ9P2R6 1566 aa21.78■■□□□ 1.08
SSBP1-201ENST00000265304 ARHGEF40Q8TER5 1519 aa21.78■■□□□ 1.08
SSBP1-201ENST00000265304 C9orf84Q5VXU9 1444 aa21.78■■□□□ 1.08
SSBP1-201ENST00000265304 PLXNC1O60486 1568 aa21.78■■□□□ 1.08
SSBP1-201ENST00000265304 ROCK1Q13464 1354 aa21.76■■□□□ 1.07
SSBP1-201ENST00000265304 YEATS2Q9ULM3 1422 aa21.76■■□□□ 1.07
SSBP1-201ENST00000265304 DIP2CQ9Y2E4 1556 aa21.76■■□□□ 1.07
SSBP1-201ENST00000265304 NCOA1Q15788 1441 aa21.75■■□□□ 1.07
SSBP1-201ENST00000265304 ABCA6Q8N139 1617 aa21.75■■□□□ 1.07
SSBP1-201ENST00000265304 ATP10AO60312 1499 aa21.75■■□□□ 1.07
SSBP1-201ENST00000265304 ADGBQ8N7X0 1667 aa21.75■■□□□ 1.07
SSBP1-201ENST00000265304 ANKRD30AQ9BXX3 1397 aa21.69■■□□□ 1.06
SSBP1-201ENST00000265304 AGLP35573 1532 aa21.69■■□□□ 1.06
SSBP1-201ENST00000265304 BCORL1Q5H9F3 1711 aa21.69■■□□□ 1.06
SSBP1-201ENST00000265304 DHX29Q7Z478 1369 aaKnown RBP21.68■■□□□ 1.06
SSBP1-201ENST00000265304 DUOX2Q9NRD8 1548 aa21.66■■□□□ 1.06
SSBP1-201ENST00000265304 A2MP01023 1474 aa21.66■■□□□ 1.06
SSBP1-201ENST00000265304 SIGLEC1Q9BZZ2 1709 aa21.66■■□□□ 1.06
SSBP1-201ENST00000265304 KIF15Q9NS87 1388 aa21.63■■□□□ 1.05
SSBP1-201ENST00000265304 EIF2AK4Q9P2K8 1649 aaKnown RBP21.62■■□□□ 1.05
SSBP1-201ENST00000265304 TRIM26Q12899 539 aaPredicted RBP21.62■■□□□ 1.05
SSBP1-201ENST00000265304 CHIC2Q9UKJ5 165 aa21.62■■□□□ 1.05
SSBP1-201ENST00000265304 HFM1A2PYH4 1435 aa21.61■■□□□ 1.05
SSBP1-201ENST00000265304 ERBINQ96RT1 1412 aa21.61■■□□□ 1.05
SSBP1-201ENST00000265304 GCC2Q8IWJ2 1684 aa21.6■■□□□ 1.05
SSBP1-201ENST00000265304 NAIPQ13075 1403 aa21.59■■□□□ 1.05
SSBP1-201ENST00000265304 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.05
SSBP1-201ENST00000265304 MYT1LQ9UL68 1186 aa21.58■■□□□ 1.05
SSBP1-201ENST00000265304 ITGAEP38570 1179 aa21.57■■□□□ 1.04
SSBP1-201ENST00000265304 ANKRD50Q9ULJ7 1429 aa21.55■■□□□ 1.04
SSBP1-201ENST00000265304 RNF17Q9BXT8 1623 aaKnown RBP21.55■■□□□ 1.04
SSBP1-201ENST00000265304 DEPDC5O75140 1603 aa21.55■■□□□ 1.04
SSBP1-201ENST00000265304 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
SSBP1-201ENST00000265304 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms