RNA–Protein interactions for RNA: ENST00000264234.7

UPK1B-201, Transcript of uroplakin 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1B, Length 2,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-201ENST00000264234 CDC42BPAQ5VT25 1732 aa17.65■□□□□ 0.42
UPK1B-201ENST00000264234 EFCAB2Q5VUJ9 269 aa17.65■□□□□ 0.42
UPK1B-201ENST00000264234 PREX2Q70Z35 1606 aa17.64■□□□□ 0.42
UPK1B-201ENST00000264234 FANCAO15360 1455 aa17.64■□□□□ 0.42
UPK1B-201ENST00000264234 ZNF644Q9H582 1327 aaPredicted RBP17.64■□□□□ 0.41
UPK1B-201ENST00000264234 ITSN2Q9NZM3 1697 aa17.63■□□□□ 0.41
UPK1B-201ENST00000264234 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
UPK1B-201ENST00000264234 FGD6Q6ZV73 1430 aa17.62■□□□□ 0.41
UPK1B-201ENST00000264234 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
UPK1B-201ENST00000264234 TEX14Q8IWB6 1497 aa17.61■□□□□ 0.41
UPK1B-201ENST00000264234 ARAP3Q8WWN8 1544 aa17.61■□□□□ 0.41
UPK1B-201ENST00000264234 FAM50AQ14320 339 aaKnown RBP17.6■□□□□ 0.41
UPK1B-201ENST00000264234 MIA2Q96PC5 1412 aa17.6■□□□□ 0.41
UPK1B-201ENST00000264234 PPRC1Q5VV67 1664 aaKnown RBP17.6■□□□□ 0.41
UPK1B-201ENST00000264234 AKNAQ7Z591 1439 aa17.59■□□□□ 0.41
UPK1B-201ENST00000264234 SAMD9LQ8IVG5 1584 aa17.57■□□□□ 0.4
UPK1B-201ENST00000264234 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.4
UPK1B-201ENST00000264234 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
UPK1B-201ENST00000264234 NEO1Q92859 1461 aa17.57■□□□□ 0.4
UPK1B-201ENST00000264234 ADGRL1O94910 1474 aa17.56■□□□□ 0.4
UPK1B-201ENST00000264234 PTPN23Q9H3S7 1636 aa17.56■□□□□ 0.4
UPK1B-201ENST00000264234 SCAPERQ9BY12 1400 aa17.54■□□□□ 0.4
UPK1B-201ENST00000264234 CFAP74Q9C0B2 1584 aa17.54■□□□□ 0.4
UPK1B-201ENST00000264234 RRBP1Q9P2E9 1410 aaKnown RBP17.54■□□□□ 0.4
UPK1B-201ENST00000264234 SYCP2Q9BX26 1530 aa17.53■□□□□ 0.4
UPK1B-201ENST00000264234 ARHGEF12Q9NZN5 1544 aa17.52■□□□□ 0.4
UPK1B-201ENST00000264234 RAPGEF3O95398 923 aa17.52■□□□□ 0.4
UPK1B-201ENST00000264234 TCOF1Q13428 1488 aaKnown RBP17.52■□□□□ 0.4
UPK1B-201ENST00000264234 ABCC1P33527 1531 aa17.52■□□□□ 0.39
UPK1B-201ENST00000264234 PLEKHH2Q8IVE3 1493 aa17.51■□□□□ 0.39
UPK1B-201ENST00000264234 ITGAEP38570 1179 aa17.51■□□□□ 0.39
UPK1B-201ENST00000264234 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
UPK1B-201ENST00000264234 AFAP1Q8N556 730 aa17.5■□□□□ 0.39
UPK1B-201ENST00000264234 TRAPPC8Q9Y2L5 1435 aa17.49■□□□□ 0.39
UPK1B-201ENST00000264234 DENND4BO75064 1496 aaPredicted RBP17.49■□□□□ 0.39
UPK1B-201ENST00000264234 COL17A1Q9UMD9 1497 aaPredicted RBP17.49■□□□□ 0.39
UPK1B-201ENST00000264234 MBD5Q9P267 1494 aa17.48■□□□□ 0.39
UPK1B-201ENST00000264234 POGZQ7Z3K3 1410 aa17.46■□□□□ 0.39
UPK1B-201ENST00000264234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.46■□□□□ 0.39
UPK1B-201ENST00000264234 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
UPK1B-201ENST00000264234 MYT1LQ9UL68 1186 aa17.45■□□□□ 0.38
UPK1B-201ENST00000264234 ABCC5O15440 1437 aa17.44■□□□□ 0.38
UPK1B-201ENST00000264234 CCDC141Q6ZP82 1450 aa17.44■□□□□ 0.38
UPK1B-201ENST00000264234 ZNF518AQ6AHZ1 1483 aa17.44■□□□□ 0.38
UPK1B-201ENST00000264234 DAPK1P53355 1430 aa17.44■□□□□ 0.38
UPK1B-201ENST00000264234 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
UPK1B-201ENST00000264234 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
UPK1B-201ENST00000264234 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
UPK1B-201ENST00000264234 KDM6BO15054 1643 aa17.43■□□□□ 0.38
UPK1B-201ENST00000264234 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
UPK1B-201ENST00000264234 ARHGEF5Q12774 1597 aa17.42■□□□□ 0.38
UPK1B-201ENST00000264234 SPAG9O60271 1321 aaKnown RBP17.41■□□□□ 0.38
UPK1B-201ENST00000264234 DNMT1P26358 1616 aaKnown RBP17.41■□□□□ 0.38
UPK1B-201ENST00000264234 PTPRKQ15262 1439 aa17.4■□□□□ 0.38
UPK1B-201ENST00000264234 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
UPK1B-201ENST00000264234 RICTORQ6R327 1708 aa17.39■□□□□ 0.37
UPK1B-201ENST00000264234 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
UPK1B-201ENST00000264234 KDM5CP41229 1560 aa17.37■□□□□ 0.37
UPK1B-201ENST00000264234 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
UPK1B-201ENST00000264234 RRP7BPQ9NSQ0 103 aa17.35■□□□□ 0.37
UPK1B-201ENST00000264234 CROCC2H7BZ55 1655 aa17.34■□□□□ 0.37
UPK1B-201ENST00000264234 MLH3Q9UHC1 1453 aa17.34■□□□□ 0.37
UPK1B-201ENST00000264234 ZFYVE16Q7Z3T8 1539 aa17.34■□□□□ 0.37
UPK1B-201ENST00000264234 HECW2Q9P2P5 1572 aa17.34■□□□□ 0.37
UPK1B-201ENST00000264234 YEATS2Q9ULM3 1422 aa17.33■□□□□ 0.37
UPK1B-201ENST00000264234 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
UPK1B-201ENST00000264234 ZMYM4Q5VZL5 1548 aa17.33■□□□□ 0.37
UPK1B-201ENST00000264234 RTEL1-TNFRSF6BF6WH68 1400 aa17.32■□□□□ 0.36
UPK1B-201ENST00000264234 ANKRD30AQ9BXX3 1397 aa17.32■□□□□ 0.36
UPK1B-201ENST00000264234 INO80Q9ULG1 1556 aaPredicted RBP17.31■□□□□ 0.36
UPK1B-201ENST00000264234 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
UPK1B-201ENST00000264234 MAST1Q9Y2H9 1570 aa17.31■□□□□ 0.36
UPK1B-201ENST00000264234 KIDINS220Q9ULH0 1771 aa17.3■□□□□ 0.36
UPK1B-201ENST00000264234 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
UPK1B-201ENST00000264234 KIF15Q9NS87 1388 aa17.29■□□□□ 0.36
UPK1B-201ENST00000264234 ADGRL2O95490 1459 aa17.28■□□□□ 0.36
UPK1B-201ENST00000264234 ROCK1Q13464 1354 aa17.28■□□□□ 0.36
UPK1B-201ENST00000264234 ABCA6Q8N139 1617 aa17.27■□□□□ 0.35
UPK1B-201ENST00000264234 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
UPK1B-201ENST00000264234 ADGBQ8N7X0 1667 aa17.25■□□□□ 0.35
UPK1B-201ENST00000264234 ARHGEF40Q8TER5 1519 aa17.25■□□□□ 0.35
UPK1B-201ENST00000264234 ATP10AO60312 1499 aa17.24■□□□□ 0.35
UPK1B-201ENST00000264234 PLXNC1O60486 1568 aa17.24■□□□□ 0.35
UPK1B-201ENST00000264234 A2MP01023 1474 aa17.23■□□□□ 0.35
UPK1B-201ENST00000264234 MYT1Q01538 1121 aa17.23■□□□□ 0.35
UPK1B-201ENST00000264234 HFM1A2PYH4 1435 aa17.22■□□□□ 0.35
UPK1B-201ENST00000264234 NAIPQ13075 1403 aa17.22■□□□□ 0.35
UPK1B-201ENST00000264234 DHX29Q7Z478 1369 aaKnown RBP17.22■□□□□ 0.35
UPK1B-201ENST00000264234 DUOX2Q9NRD8 1548 aa17.21■□□□□ 0.35
UPK1B-201ENST00000264234 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.35
UPK1B-201ENST00000264234 ARID4BQ4LE39 1312 aaPredicted RBP17.21■□□□□ 0.34
UPK1B-201ENST00000264234 KIF3BO15066 747 aa17.2■□□□□ 0.34
UPK1B-201ENST00000264234 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
UPK1B-201ENST00000264234 SETD5Q9C0A6 1442 aa17.17■□□□□ 0.34
UPK1B-201ENST00000264234 MLECQ14165 292 aa17.16■□□□□ 0.34
UPK1B-201ENST00000264234 ZEB1P37275 1124 aaPredicted RBP17.15■□□□□ 0.34
UPK1B-201ENST00000264234 GGT6Q6P531 493 aa17.15■□□□□ 0.34
UPK1B-201ENST00000264234 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
UPK1B-201ENST00000264234 RAB3GAP2Q9H2M9 1393 aa17.15■□□□□ 0.34
UPK1B-201ENST00000264234 GCC2Q8IWJ2 1684 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms