RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 CUX2O14529 1486 aa24.85■■□□□ 1.57
FAM20B-201ENST00000263733 PNNQ9H307 717 aaKnown RBP24.84■■□□□ 1.57
FAM20B-201ENST00000263733 POGKQ9P215 609 aa24.84■■□□□ 1.57
FAM20B-201ENST00000263733 MORC1Q86VD1 984 aa24.83■■□□□ 1.56
FAM20B-201ENST00000263733 L3MBTL2Q969R5 705 aa24.82■■□□□ 1.56
FAM20B-201ENST00000263733 CHMP4BQ9H444 224 aaKnown RBP24.82■■□□□ 1.56
FAM20B-201ENST00000263733 DHX57Q6P158 1386 aaKnown RBP24.81■■□□□ 1.56
FAM20B-201ENST00000263733 APBB1O00213 710 aa24.8■■□□□ 1.56
FAM20B-201ENST00000263733 SLC4A3P48751 1232 aa24.8■■□□□ 1.56
FAM20B-201ENST00000263733 CDK11BP21127 795 aaKnown RBP24.79■■□□□ 1.56
FAM20B-201ENST00000263733 MROH2BQ7Z745 1585 aa24.79■■□□□ 1.56
FAM20B-201ENST00000263733 RALBP1Q15311 655 aa24.78■■□□□ 1.56
FAM20B-201ENST00000263733 KCNJ4P48050 445 aa24.77■■□□□ 1.56
FAM20B-201ENST00000263733 OS9Q13438 667 aaPredicted RBP24.77■■□□□ 1.56
FAM20B-201ENST00000263733 SAFB2Q14151 953 aaKnown RBP eCLIP24.77■■□□□ 1.56
FAM20B-201ENST00000263733 AMER1Q5JTC6 1135 aaPredicted RBP24.75■■□□□ 1.55
FAM20B-201ENST00000263733 MFAP1P55081 439 aaKnown RBP24.75■■□□□ 1.55
FAM20B-201ENST00000263733 EIF4G1Q04637 1599 aaKnown RBP24.74■■□□□ 1.55
FAM20B-201ENST00000263733 GOLGA6L3A6NEY3 463 aa24.74■■□□□ 1.55
FAM20B-201ENST00000263733 FGD1P98174 961 aa24.74■■□□□ 1.55
FAM20B-201ENST00000263733 NACADO15069 1562 aa24.74■■□□□ 1.55
FAM20B-201ENST00000263733 GBP4Q96PP9 640 aa24.73■■□□□ 1.55
FAM20B-201ENST00000263733 CHAF1AQ13111 956 aaPredicted RBP24.73■■□□□ 1.55
FAM20B-201ENST00000263733 NAP1L2Q9ULW6 460 aaPredicted RBP24.72■■□□□ 1.55
FAM20B-201ENST00000263733 ROCK2O75116 1388 aaKnown RBP24.72■■□□□ 1.55
FAM20B-201ENST00000263733 GOLGA6L4A6NEF3 574 aa24.72■■□□□ 1.55
FAM20B-201ENST00000263733 ITPRIPQ8IWB1 547 aa24.71■■□□□ 1.55
FAM20B-201ENST00000263733 RWDD1Q9H446 243 aaPredicted RBP24.71■■□□□ 1.55
FAM20B-201ENST00000263733 CLUAP1Q96AJ1 413 aa24.7■■□□□ 1.54
FAM20B-201ENST00000263733 CCDC146Q8IYE0 955 aa24.7■■□□□ 1.54
FAM20B-201ENST00000263733 PDE4AP27815 886 aa24.7■■□□□ 1.54
FAM20B-201ENST00000263733 PLIN1O60240 522 aa24.69■■□□□ 1.54
FAM20B-201ENST00000263733 SOX12O15370 315 aa24.68■■□□□ 1.54
FAM20B-201ENST00000263733 SRPK2P78362 688 aaKnown RBP24.68■■□□□ 1.54
FAM20B-201ENST00000263733 FOXD4L1Q9NU39 408 aa24.68■■□□□ 1.54
FAM20B-201ENST00000263733 DRC7Q8IY82 874 aa24.67■■□□□ 1.54
FAM20B-201ENST00000263733 EXOC6Q8TAG9 804 aa24.67■■□□□ 1.54
FAM20B-201ENST00000263733 U2AF1L5P0DN76 240 aaPredicted RBP24.66■■□□□ 1.54
FAM20B-201ENST00000263733 U2AF1Q01081 240 aaKnown RBP eCLIP24.66■■□□□ 1.54
FAM20B-201ENST00000263733 GOLGA2Q08379 1002 aa24.66■■□□□ 1.54
FAM20B-201ENST00000263733 FANCIQ9NVI1 1328 aa24.65■■□□□ 1.54
FAM20B-201ENST00000263733 GOLGA6L6A8MZA4 724 aa24.64■■□□□ 1.54
FAM20B-201ENST00000263733 MCCP23508 829 aa24.63■■□□□ 1.53
FAM20B-201ENST00000263733 NLRP13Q86W25 1043 aa24.63■■□□□ 1.53
FAM20B-201ENST00000263733 FMN1Q68DA7 1419 aa24.62■■□□□ 1.53
FAM20B-201ENST00000263733 PRKRIP1Q9H875 184 aaPredicted RBP24.62■■□□□ 1.53
FAM20B-201ENST00000263733 NUP155O75694 1391 aa24.62■■□□□ 1.53
FAM20B-201ENST00000263733 IPO8O15397 1037 aaKnown RBP24.61■■□□□ 1.53
FAM20B-201ENST00000263733 PMFBP1Q8TBY8 1022 aa24.6■■□□□ 1.53
FAM20B-201ENST00000263733 GSE1Q14687 1217 aa24.6■■□□□ 1.53
FAM20B-201ENST00000263733 USP35Q9P2H5 1018 aa24.59■■□□□ 1.53
FAM20B-201ENST00000263733 PDE3BQ13370 1112 aa24.57■■□□□ 1.52
FAM20B-201ENST00000263733 NRDCO43847 1150 aa24.57■■□□□ 1.52
FAM20B-201ENST00000263733 LMOD2Q6P5Q4 547 aa24.57■■□□□ 1.52
FAM20B-201ENST00000263733 RAPGEF2Q9Y4G8 1499 aa24.57■■□□□ 1.52
FAM20B-201ENST00000263733 STK26Q9P289 416 aa24.56■■□□□ 1.52
FAM20B-201ENST00000263733 KIAA2012Q0VF49 1180 aa24.55■■□□□ 1.52
FAM20B-201ENST00000263733 SMC4Q9NTJ3 1288 aa24.55■■□□□ 1.52
FAM20B-201ENST00000263733 ZBED9Q6R2W3 1325 aa24.55■■□□□ 1.52
FAM20B-201ENST00000263733 RUSC2Q8N2Y8 1516 aa24.54■■□□□ 1.52
FAM20B-201ENST00000263733 RRP1P56182 461 aaKnown RBP24.54■■□□□ 1.52
FAM20B-201ENST00000263733 TULP1O00294 542 aaPredicted RBP24.54■■□□□ 1.52
FAM20B-201ENST00000263733 CRBNQ96SW2 442 aa24.53■■□□□ 1.52
FAM20B-201ENST00000263733 CENPJQ9HC77 1338 aaPredicted RBP24.52■■□□□ 1.52
FAM20B-201ENST00000263733 PTMSP20962 102 aa24.52■■□□□ 1.52
FAM20B-201ENST00000263733 FAM161AQ3B820 660 aa24.51■■□□□ 1.51
FAM20B-201ENST00000263733 ST20-MTHFSA0A0A6YYL1 179 aa24.5■■□□□ 1.51
FAM20B-201ENST00000263733 CALD1Q05682 793 aaKnown RBP24.49■■□□□ 1.51
FAM20B-201ENST00000263733 CFAP44Q96MT7 982 aa24.49■■□□□ 1.51
FAM20B-201ENST00000263733 FHOD3Q2V2M9 1422 aa24.48■■□□□ 1.51
FAM20B-201ENST00000263733 MYBBP1AQ9BQG0 1328 aaKnown RBP24.48■■□□□ 1.51
FAM20B-201ENST00000263733 NOL8Q76FK4 1167 aaKnown RBP24.48■■□□□ 1.51
FAM20B-201ENST00000263733 HSP90AA2PQ14568 343 aaPredicted RBP24.47■■□□□ 1.51
FAM20B-201ENST00000263733 RRP7AQ9Y3A4 280 aaKnown RBP24.47■■□□□ 1.51
FAM20B-201ENST00000263733 KANK1Q14678 1352 aa24.47■■□□□ 1.51
FAM20B-201ENST00000263733 WIZO95785 1651 aa24.47■■□□□ 1.51
FAM20B-201ENST00000263733 CENPQQ7L2Z9 268 aaPredicted RBP24.47■■□□□ 1.51
FAM20B-201ENST00000263733 BCL2L13Q9BXK5 485 aa24.47■■□□□ 1.51
FAM20B-201ENST00000263733 KIF15Q9NS87 1388 aa24.45■■□□□ 1.51
FAM20B-201ENST00000263733 FOXD4L5Q5VV16 416 aaPredicted RBP24.45■■□□□ 1.51
FAM20B-201ENST00000263733 FOXD4L4Q8WXT5 416 aaPredicted RBP24.45■■□□□ 1.51
FAM20B-201ENST00000263733 KIAA1211Q6ZU35 1233 aa24.45■■□□□ 1.5
FAM20B-201ENST00000263733 RSPH6AQ9H0K4 717 aa24.44■■□□□ 1.5
FAM20B-201ENST00000263733 GGT6Q6P531 493 aa24.42■■□□□ 1.5
FAM20B-201ENST00000263733 RTF1Q92541 710 aaKnown RBP24.42■■□□□ 1.5
FAM20B-201ENST00000263733 PANK3Q9H999 370 aa24.42■■□□□ 1.5
FAM20B-201ENST00000263733 HAP1P54257 671 aaPredicted RBP24.42■■□□□ 1.5
FAM20B-201ENST00000263733 ANKRD30AQ9BXX3 1397 aa24.41■■□□□ 1.5
FAM20B-201ENST00000263733 SYAP1Q96A49 352 aaPredicted RBP24.4■■□□□ 1.5
FAM20B-201ENST00000263733 VSIG10Q8N0Z9 540 aa24.4■■□□□ 1.5
FAM20B-201ENST00000263733 HDGFL2Q7Z4V5 671 aaPredicted RBP24.38■■□□□ 1.49
FAM20B-201ENST00000263733 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
FAM20B-201ENST00000263733 COG6Q9Y2V7 657 aa24.38■■□□□ 1.49
FAM20B-201ENST00000263733 TRIM6-TRIM34B2RNG4 842 aa24.37■■□□□ 1.49
FAM20B-201ENST00000263733 HNRNPMP52272 730 aaKnown RBP eCLIP24.37■■□□□ 1.492e-6■■■■□ 23.5
FAM20B-201ENST00000263733 DDX11L8A8MPP1 907 aa24.34■■□□□ 1.49
FAM20B-201ENST00000263733 DDX49Q9Y6V7 483 aaKnown RBP24.33■■□□□ 1.49
FAM20B-201ENST00000263733 PHLDB1Q86UU1 1377 aa24.32■■□□□ 1.48
FAM20B-201ENST00000263733 MLECQ14165 292 aa24.32■■□□□ 1.48
FAM20B-201ENST00000263733 SLC4A10Q6U841 1118 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms