RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 CHIC2Q9UKJ5 165 aa13.43□□□□□ -0.26
SIM1-201ENST00000262901 ATP10BO94823 1461 aa13.43□□□□□ -0.26
SIM1-201ENST00000262901 EFCAB2Q5VUJ9 269 aa13.42□□□□□ -0.26
SIM1-201ENST00000262901 ABCC2Q92887 1545 aa13.42□□□□□ -0.26
SIM1-201ENST00000262901 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
SIM1-201ENST00000262901 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
SIM1-201ENST00000262901 SUPT6HQ7KZ85 1726 aaKnown RBP13.41□□□□□ -0.26
SIM1-201ENST00000262901 SHROOM2Q13796 1616 aa13.41□□□□□ -0.26
SIM1-201ENST00000262901 CFAP43Q8NDM7 1665 aa13.4□□□□□ -0.26
SIM1-201ENST00000262901 ABCA8O94911 1581 aa13.4□□□□□ -0.26
SIM1-201ENST00000262901 TRIM52Q96A61 297 aa13.39□□□□□ -0.27
SIM1-201ENST00000262901 RRBP1Q9P2E9 1410 aaKnown RBP13.38□□□□□ -0.27
SIM1-201ENST00000262901 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
SIM1-201ENST00000262901 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
SIM1-201ENST00000262901 MIA2Q96PC5 1412 aa13.36□□□□□ -0.27
SIM1-201ENST00000262901 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
SIM1-201ENST00000262901 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
SIM1-201ENST00000262901 KIF14Q15058 1648 aa13.35□□□□□ -0.27
SIM1-201ENST00000262901 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
SIM1-201ENST00000262901 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
SIM1-201ENST00000262901 HNRNPMP52272 730 aaKnown RBP eCLIP13.31□□□□□ -0.28
SIM1-201ENST00000262901 ZNF644Q9H582 1327 aaPredicted RBP13.31□□□□□ -0.28
SIM1-201ENST00000262901 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
SIM1-201ENST00000262901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
SIM1-201ENST00000262901 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
SIM1-201ENST00000262901 ARHGAP5Q13017 1502 aa13.3□□□□□ -0.28
SIM1-201ENST00000262901 KDM5BQ9UGL1 1544 aa13.3□□□□□ -0.28
SIM1-201ENST00000262901 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
SIM1-201ENST00000262901 MIER1Q8N108 512 aa13.3□□□□□ -0.28
SIM1-201ENST00000262901 ANP32CO43423 234 aa13.29□□□□□ -0.28
SIM1-201ENST00000262901 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
SIM1-201ENST00000262901 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
SIM1-201ENST00000262901 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
SIM1-201ENST00000262901 ZNF326Q5BKZ1 582 aaKnown RBP13.28□□□□□ -0.28
SIM1-201ENST00000262901 MAGI3Q5TCQ9 1506 aa13.28□□□□□ -0.28
SIM1-201ENST00000262901 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.28
SIM1-201ENST00000262901 GPATCH8Q9UKJ3 1502 aaKnown RBP13.26□□□□□ -0.29
SIM1-201ENST00000262901 PLEKHH2Q8IVE3 1493 aa13.26□□□□□ -0.29
SIM1-201ENST00000262901 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
SIM1-201ENST00000262901 PTPN23Q9H3S7 1636 aa13.24□□□□□ -0.29
SIM1-201ENST00000262901 PDIA4P13667 645 aaKnown RBP13.23□□□□□ -0.29
SIM1-201ENST00000262901 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
SIM1-201ENST00000262901 CD109Q6YHK3 1445 aa13.23□□□□□ -0.29
SIM1-201ENST00000262901 RAB3GAP2Q9H2M9 1393 aa13.23□□□□□ -0.29
SIM1-201ENST00000262901 PDE4CQ08493 712 aa13.22□□□□□ -0.29
SIM1-201ENST00000262901 ZCCHC11Q5TAX3 1644 aaKnown RBP13.22□□□□□ -0.29
SIM1-201ENST00000262901 CAMSAP2Q08AD1 1489 aa13.22□□□□□ -0.29
SIM1-201ENST00000262901 ITSN2Q9NZM3 1697 aa13.22□□□□□ -0.29
SIM1-201ENST00000262901 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
SIM1-201ENST00000262901 PLCH2O75038 1416 aa13.21□□□□□ -0.29
SIM1-201ENST00000262901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.3
SIM1-201ENST00000262901 RIMBP3CA6NJZ7 1639 aa13.21□□□□□ -0.3
SIM1-201ENST00000262901 RIMBP3BA6NNM3 1639 aa13.21□□□□□ -0.3
SIM1-201ENST00000262901 RIMBP3Q9UFD9 1639 aa13.21□□□□□ -0.3
SIM1-201ENST00000262901 ADCY10Q96PN6 1610 aa13.2□□□□□ -0.3
SIM1-201ENST00000262901 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
SIM1-201ENST00000262901 DAPK1P53355 1430 aa13.19□□□□□ -0.3
SIM1-201ENST00000262901 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
SIM1-201ENST00000262901 TCOF1Q13428 1488 aaKnown RBP13.18□□□□□ -0.3
SIM1-201ENST00000262901 FKBP8Q14318 412 aa13.18□□□□□ -0.3
SIM1-201ENST00000262901 ABCC10Q5T3U5 1492 aa13.18□□□□□ -0.3
SIM1-201ENST00000262901 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
SIM1-201ENST00000262901 FANCAO15360 1455 aa13.17□□□□□ -0.3
SIM1-201ENST00000262901 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
SIM1-201ENST00000262901 SCAPERQ9BY12 1400 aa13.16□□□□□ -0.3
SIM1-201ENST00000262901 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
SIM1-201ENST00000262901 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
SIM1-201ENST00000262901 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
SIM1-201ENST00000262901 ABCC5O15440 1437 aa13.16□□□□□ -0.3
SIM1-201ENST00000262901 C9orf84Q5VXU9 1444 aa13.16□□□□□ -0.3
SIM1-201ENST00000262901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.15□□□□□ -0.3
SIM1-201ENST00000262901 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
SIM1-201ENST00000262901 KIF15Q9NS87 1388 aa13.14□□□□□ -0.31
SIM1-201ENST00000262901 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
SIM1-201ENST00000262901 ADGRL1O94910 1474 aa13.14□□□□□ -0.31
SIM1-201ENST00000262901 HFM1A2PYH4 1435 aa13.14□□□□□ -0.31
SIM1-201ENST00000262901 DNAJC5Q9H3Z4 198 aa13.13□□□□□ -0.31
SIM1-201ENST00000262901 ROCK1Q13464 1354 aa13.13□□□□□ -0.31
SIM1-201ENST00000262901 KIAA1107Q9UPP5 1409 aa13.13□□□□□ -0.31
SIM1-201ENST00000262901 ESF1Q9H501 851 aaKnown RBP13.12□□□□□ -0.31
SIM1-201ENST00000262901 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
SIM1-201ENST00000262901 ANKRD50Q9ULJ7 1429 aa13.11□□□□□ -0.31
SIM1-201ENST00000262901 NUP155O75694 1391 aa13.1□□□□□ -0.31
SIM1-201ENST00000262901 KANK1Q14678 1352 aa13.1□□□□□ -0.31
SIM1-201ENST00000262901 TTC37Q6PGP7 1564 aa13.1□□□□□ -0.31
SIM1-201ENST00000262901 NAIPQ13075 1403 aa13.09□□□□□ -0.31
SIM1-201ENST00000262901 KIF3BO15066 747 aa13.09□□□□□ -0.31
SIM1-201ENST00000262901 PTPRKQ15262 1439 aa13.09□□□□□ -0.31
SIM1-201ENST00000262901 SYCP2Q9BX26 1530 aa13.09□□□□□ -0.31
SIM1-201ENST00000262901 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
SIM1-201ENST00000262901 TEX14Q8IWB6 1497 aa13.08□□□□□ -0.32
SIM1-201ENST00000262901 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
SIM1-201ENST00000262901 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
SIM1-201ENST00000262901 RAPGEF3O95398 923 aa13.07□□□□□ -0.32
SIM1-201ENST00000262901 DEKP35659 375 aaKnown RBP13.07□□□□□ -0.32
SIM1-201ENST00000262901 HNRNPUQ00839 825 aaKnown RBP eCLIP13.07□□□□□ -0.32
SIM1-201ENST00000262901 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
SIM1-201ENST00000262901 DHX57Q6P158 1386 aaKnown RBP13.07□□□□□ -0.32
SIM1-201ENST00000262901 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
SIM1-201ENST00000262901 ARID4BQ4LE39 1312 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms