RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
TTC39A-201ENST00000262675 EFCAB2Q5VUJ9 269 aa15.18■□□□□ 0.02
TTC39A-201ENST00000262675 SCAPERQ9BY12 1400 aa15.18■□□□□ 0.02
TTC39A-201ENST00000262675 KIF14Q15058 1648 aa15.18■□□□□ 0.02
TTC39A-201ENST00000262675 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
TTC39A-201ENST00000262675 CLIP1P30622 1438 aa15.17■□□□□ 0.02
TTC39A-201ENST00000262675 PCGF6Q9BYE7 350 aa15.17■□□□□ 0.02
TTC39A-201ENST00000262675 FER1L4A9Z1Z3 1794 aa15.16■□□□□ 0.02
TTC39A-201ENST00000262675 ATP10AO60312 1499 aa15.16■□□□□ 0.02
TTC39A-201ENST00000262675 C9orf84Q5VXU9 1444 aa15.15■□□□□ 0.02
TTC39A-201ENST00000262675 YEATS2Q9ULM3 1422 aa15.15■□□□□ 0.02
TTC39A-201ENST00000262675 ZNF518AQ6AHZ1 1483 aa15.15■□□□□ 0.02
TTC39A-201ENST00000262675 ARHGAP35Q9NRY4 1499 aa15.15■□□□□ 0.02
TTC39A-201ENST00000262675 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
TTC39A-201ENST00000262675 ARHGEF12Q9NZN5 1544 aa15.12■□□□□ 0.01
TTC39A-201ENST00000262675 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
TTC39A-201ENST00000262675 ARHGAP5Q13017 1502 aa15.11■□□□□ 0.01
TTC39A-201ENST00000262675 KDM5CP41229 1560 aa15.1■□□□□ 0.01
TTC39A-201ENST00000262675 SIGLEC1Q9BZZ2 1709 aa15.1■□□□□ 0.01
TTC39A-201ENST00000262675 TRIM26Q12899 539 aaPredicted RBP15.1■□□□□ 0.01
TTC39A-201ENST00000262675 CCDC18Q5T9S5 1454 aa15.1■□□□□ 0.01
TTC39A-201ENST00000262675 REREQ9P2R6 1566 aa15.1■□□□□ 0.01
TTC39A-201ENST00000262675 PREX1Q8TCU6 1659 aa15.09■□□□□ 0.01
TTC39A-201ENST00000262675 MLH3Q9UHC1 1453 aa15.05■□□□□ 0
TTC39A-201ENST00000262675 MLECQ14165 292 aa15.05■□□□□ 0
TTC39A-201ENST00000262675 CASKIN1Q8WXD9 1431 aa15.05■□□□□ 0
TTC39A-201ENST00000262675 PREX2Q70Z35 1606 aa15.05■□□□□ -0
TTC39A-201ENST00000262675 LRRIQ1Q96JM4 1722 aa15.04■□□□□ -0
TTC39A-201ENST00000262675 CDC42BPBQ9Y5S2 1711 aa15.04■□□□□ -0
TTC39A-201ENST00000262675 SETD1BQ9UPS6 1966 aaKnown RBP15.04■□□□□ -0
TTC39A-201ENST00000262675 DIP2CQ9Y2E4 1556 aa15.03■□□□□ -0
TTC39A-201ENST00000262675 AGLP35573 1532 aa15.03■□□□□ -0
TTC39A-201ENST00000262675 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
TTC39A-201ENST00000262675 HSPA2P54652 639 aa15.02□□□□□ -0.01
TTC39A-201ENST00000262675 ABCC1P33527 1531 aa15.02□□□□□ -0.01
TTC39A-201ENST00000262675 MYT1LQ9UL68 1186 aa15.01□□□□□ -0.01
TTC39A-201ENST00000262675 ITSN2Q9NZM3 1697 aa15.01□□□□□ -0.01
TTC39A-201ENST00000262675 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
TTC39A-201ENST00000262675 FYCO1Q9BQS8 1478 aa15□□□□□ -0.01
TTC39A-201ENST00000262675 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
TTC39A-201ENST00000262675 AFAP1Q8N556 730 aa15□□□□□ -0.01
TTC39A-201ENST00000262675 ABCA6Q8N139 1617 aa14.99□□□□□ -0.01
TTC39A-201ENST00000262675 CNTLNQ9NXG0 1405 aa14.99□□□□□ -0.01
TTC39A-201ENST00000262675 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
TTC39A-201ENST00000262675 ESF1Q9H501 851 aaKnown RBP14.98□□□□□ -0.01
TTC39A-201ENST00000262675 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
TTC39A-201ENST00000262675 CDC42BPAQ5VT25 1732 aa14.97□□□□□ -0.01
TTC39A-201ENST00000262675 C3P01024 1663 aa14.95□□□□□ -0.02
TTC39A-201ENST00000262675 KIDINS220Q9ULH0 1771 aa14.94□□□□□ -0.02
TTC39A-201ENST00000262675 PLEKHH2Q8IVE3 1493 aa14.94□□□□□ -0.02
TTC39A-201ENST00000262675 TRAPPC8Q9Y2L5 1435 aa14.94□□□□□ -0.02
TTC39A-201ENST00000262675 MROH2AA6NES4 1674 aa14.93□□□□□ -0.02
TTC39A-201ENST00000262675 PTPRTO14522 1441 aa14.93□□□□□ -0.02
TTC39A-201ENST00000262675 STRCQ7RTU9 1775 aa14.93□□□□□ -0.02
TTC39A-201ENST00000262675 CEBPAP49715 358 aaPredicted RBP14.92□□□□□ -0.02
TTC39A-201ENST00000262675 SAMD9LQ8IVG5 1584 aa14.91□□□□□ -0.02
TTC39A-201ENST00000262675 NPATQ14207 1427 aa14.91□□□□□ -0.02
TTC39A-201ENST00000262675 KIAA1107Q9UPP5 1409 aa14.91□□□□□ -0.02
TTC39A-201ENST00000262675 ZEB1P37275 1124 aaPredicted RBP14.9□□□□□ -0.02
TTC39A-201ENST00000262675 GPATCH8Q9UKJ3 1502 aaKnown RBP14.88□□□□□ -0.03
TTC39A-201ENST00000262675 SPAG9O60271 1321 aaKnown RBP14.87□□□□□ -0.03
TTC39A-201ENST00000262675 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
TTC39A-201ENST00000262675 IQSEC2Q5JU85 1478 aa14.87□□□□□ -0.03
TTC39A-201ENST00000262675 ATP7AQ04656 1500 aa14.87□□□□□ -0.03
TTC39A-201ENST00000262675 CCNB3Q8WWL7 1395 aa14.86□□□□□ -0.03
TTC39A-201ENST00000262675 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
TTC39A-201ENST00000262675 INO80Q9ULG1 1556 aaPredicted RBP14.85□□□□□ -0.03
TTC39A-201ENST00000262675 CFDP1Q9UEE9 299 aaPredicted RBP14.84□□□□□ -0.03
TTC39A-201ENST00000262675 ZNF777Q9ULD5 760 aaPredicted RBP14.84□□□□□ -0.03
TTC39A-201ENST00000262675 PLXNC1O60486 1568 aa14.84□□□□□ -0.03
TTC39A-201ENST00000262675 NCOA1Q15788 1441 aa14.84□□□□□ -0.03
TTC39A-201ENST00000262675 ADGBQ8N7X0 1667 aa14.84□□□□□ -0.03
TTC39A-201ENST00000262675 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.04
TTC39A-201ENST00000262675 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
TTC39A-201ENST00000262675 A2MP01023 1474 aa14.83□□□□□ -0.04
TTC39A-201ENST00000262675 ZMYM3Q14202 1370 aa14.82□□□□□ -0.04
TTC39A-201ENST00000262675 EHBP1L1Q8N3D4 1523 aa14.81□□□□□ -0.04
TTC39A-201ENST00000262675 ZNF142P52746 1687 aaPredicted RBP14.81□□□□□ -0.04
TTC39A-201ENST00000262675 HNRNPMP52272 730 aaKnown RBP eCLIP14.8□□□□□ -0.04
TTC39A-201ENST00000262675 CLTCQ00610 1675 aaKnown RBP14.79□□□□□ -0.04
TTC39A-201ENST00000262675 CAMSAP1Q5T5Y3 1602 aa14.79□□□□□ -0.04
TTC39A-201ENST00000262675 PLA2R1Q13018 1463 aa14.79□□□□□ -0.04
TTC39A-201ENST00000262675 RTEL1-TNFRSF6BF6WH68 1400 aa14.79□□□□□ -0.04
TTC39A-201ENST00000262675 FAM135AQ9P2D6 1515 aa14.79□□□□□ -0.04
TTC39A-201ENST00000262675 PKD2Q13563 968 aa14.78□□□□□ -0.04
TTC39A-201ENST00000262675 LTBP4Q8N2S1 1624 aa14.78□□□□□ -0.04
TTC39A-201ENST00000262675 CEP162Q5TB80 1403 aa14.77□□□□□ -0.05
TTC39A-201ENST00000262675 MYO3AQ8NEV4 1616 aa14.77□□□□□ -0.05
TTC39A-201ENST00000262675 TIAM1Q13009 1591 aa14.77□□□□□ -0.05
TTC39A-201ENST00000262675 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
TTC39A-201ENST00000262675 PTPRKQ15262 1439 aa14.75□□□□□ -0.05
TTC39A-201ENST00000262675 CEP170BQ9Y4F5 1589 aaPredicted RBP14.75□□□□□ -0.05
TTC39A-201ENST00000262675 MBD5Q9P267 1494 aa14.73□□□□□ -0.05
TTC39A-201ENST00000262675 DHX29Q7Z478 1369 aaKnown RBP14.72□□□□□ -0.05
TTC39A-201ENST00000262675 GGT6Q6P531 493 aa14.72□□□□□ -0.05
TTC39A-201ENST00000262675 TCOF1Q13428 1488 aaKnown RBP14.72□□□□□ -0.05
TTC39A-201ENST00000262675 A2ML1A8K2U0 1454 aa14.71□□□□□ -0.06
TTC39A-201ENST00000262675 CCDC141Q6ZP82 1450 aa14.71□□□□□ -0.06
TTC39A-201ENST00000262675 DISP3Q9P2K9 1392 aa14.7□□□□□ -0.06
TTC39A-201ENST00000262675 PPARGC1BQ86YN6 1023 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms