RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 DNAJC5BQ9UF47 199 aa24.59■■□□□ 1.53
TRAF4-201ENST00000262395 HECW1Q76N89 1606 aa24.59■■□□□ 1.53
TRAF4-201ENST00000262395 ARHGEF11O15085 1522 aa24.59■■□□□ 1.53
TRAF4-201ENST00000262395 SLC4A1APQ9BWU0 796 aaKnown RBP24.58■■□□□ 1.53
TRAF4-201ENST00000262395 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
TRAF4-201ENST00000262395 ZBED9Q6R2W3 1325 aa24.57■■□□□ 1.52
TRAF4-201ENST00000262395 GCC2Q8IWJ2 1684 aa24.56■■□□□ 1.52
TRAF4-201ENST00000262395 TCOF1Q13428 1488 aaKnown RBP24.56■■□□□ 1.52
TRAF4-201ENST00000262395 THOC2Q8NI27 1593 aaKnown RBP24.55■■□□□ 1.52
TRAF4-201ENST00000262395 EPRSP07814 1512 aaKnown RBP24.54■■□□□ 1.52
TRAF4-201ENST00000262395 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
TRAF4-201ENST00000262395 ERICH6BQ5W0A0 696 aa24.54■■□□□ 1.52
TRAF4-201ENST00000262395 ANKRD30BQ9BXX2 1392 aa24.52■■□□□ 1.52
TRAF4-201ENST00000262395 AKNAQ7Z591 1439 aa24.5■■□□□ 1.51
TRAF4-201ENST00000262395 RPRD2Q5VT52 1461 aaKnown RBP24.46■■□□□ 1.51
TRAF4-201ENST00000262395 MIA2Q96PC5 1412 aa24.44■■□□□ 1.5
TRAF4-201ENST00000262395 DAPK1P53355 1430 aa24.43■■□□□ 1.5
TRAF4-201ENST00000262395 TEX14Q8IWB6 1497 aa24.43■■□□□ 1.5
TRAF4-201ENST00000262395 NBR1Q14596 966 aa24.42■■□□□ 1.5
TRAF4-201ENST00000262395 SPATA31E1Q6ZUB1 1445 aa24.41■■□□□ 1.5
TRAF4-201ENST00000262395 ZNF777Q9ULD5 760 aaPredicted RBP24.41■■□□□ 1.5
TRAF4-201ENST00000262395 ABCC5O15440 1437 aa24.41■■□□□ 1.5
TRAF4-201ENST00000262395 PAK3O75914 559 aaPredicted RBP24.4■■□□□ 1.5
TRAF4-201ENST00000262395 CCDC136Q96JN2 1154 aa24.38■■□□□ 1.49
TRAF4-201ENST00000262395 IQGAP2Q13576 1575 aa24.37■■□□□ 1.49
TRAF4-201ENST00000262395 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
TRAF4-201ENST00000262395 WDR62O43379 1518 aa24.34■■□□□ 1.49
TRAF4-201ENST00000262395 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
TRAF4-201ENST00000262395 NUDCQ9Y266 331 aa24.34■■□□□ 1.49
TRAF4-201ENST00000262395 DHX29Q7Z478 1369 aaKnown RBP24.34■■□□□ 1.49
TRAF4-201ENST00000262395 NOP58Q9Y2X3 529 aaKnown RBP24.34■■□□□ 1.49
TRAF4-201ENST00000262395 DEKP35659 375 aaKnown RBP24.33■■□□□ 1.49
TRAF4-201ENST00000262395 USP47Q96K76 1375 aa24.32■■□□□ 1.48
TRAF4-201ENST00000262395 PKD2Q13563 968 aa24.31■■□□□ 1.48
TRAF4-201ENST00000262395 ROCK1Q13464 1354 aa24.31■■□□□ 1.48
TRAF4-201ENST00000262395 SALL2Q9Y467 1007 aaPredicted RBP24.31■■□□□ 1.48
TRAF4-201ENST00000262395 TARBP1Q13395 1621 aaKnown RBP24.3■■□□□ 1.48
TRAF4-201ENST00000262395 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
TRAF4-201ENST00000262395 TMC1Q8TDI8 760 aa24.3■■□□□ 1.48
TRAF4-201ENST00000262395 CFDP1Q9UEE9 299 aaPredicted RBP24.28■■□□□ 1.48
TRAF4-201ENST00000262395 KDM2AQ9Y2K7 1162 aa24.28■■□□□ 1.48
TRAF4-201ENST00000262395 PRKCSHP14314 528 aaPredicted RBP24.27■■□□□ 1.48
TRAF4-201ENST00000262395 PZPP20742 1482 aa24.26■■□□□ 1.47
TRAF4-201ENST00000262395 BCORL1Q5H9F3 1711 aa24.26■■□□□ 1.47
TRAF4-201ENST00000262395 DNMT1P26358 1616 aaKnown RBP24.26■■□□□ 1.47
TRAF4-201ENST00000262395 PRG4Q92954 1404 aaPredicted RBP24.24■■□□□ 1.47
TRAF4-201ENST00000262395 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
TRAF4-201ENST00000262395 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
TRAF4-201ENST00000262395 CARD11Q9BXL7 1154 aa24.21■■□□□ 1.47
TRAF4-201ENST00000262395 NUP153P49790 1475 aaKnown RBP24.21■■□□□ 1.47
TRAF4-201ENST00000262395 ADAMTS12P58397 1594 aa24.19■■□□□ 1.46
TRAF4-201ENST00000262395 POLR1AO95602 1720 aaPredicted RBP24.19■■□□□ 1.46
TRAF4-201ENST00000262395 ANP32AP39687 249 aaKnown RBP24.18■■□□□ 1.46
TRAF4-201ENST00000262395 NPM2Q86SE8 214 aaKnown RBP24.17■■□□□ 1.46
TRAF4-201ENST00000262395 KIAA1107Q9UPP5 1409 aa24.17■■□□□ 1.46
TRAF4-201ENST00000262395 RNF123Q5XPI4 1314 aa24.17■■□□□ 1.46
TRAF4-201ENST00000262395 ST20-MTHFSA0A0A6YYL1 179 aa24.17■■□□□ 1.46
TRAF4-201ENST00000262395 CAMSAP2Q08AD1 1489 aa24.15■■□□□ 1.46
TRAF4-201ENST00000262395 ZNF608Q9ULD9 1512 aaPredicted RBP24.14■■□□□ 1.46
TRAF4-201ENST00000262395 DISP1Q96F81 1524 aa24.14■■□□□ 1.45
TRAF4-201ENST00000262395 IPO9Q96P70 1041 aaKnown RBP24.13■■□□□ 1.45
TRAF4-201ENST00000262395 MBD5Q9P267 1494 aa24.13■■□□□ 1.45
TRAF4-201ENST00000262395 EXOC6Q8TAG9 804 aa24.12■■□□□ 1.45
TRAF4-201ENST00000262395 DCAF11Q8TEB1 546 aa24.11■■□□□ 1.45
TRAF4-201ENST00000262395 ZBTB47Q9UFB7 747 aaPredicted RBP24.11■■□□□ 1.45
TRAF4-201ENST00000262395 NUP155O75694 1391 aa24.1■■□□□ 1.45
TRAF4-201ENST00000262395 MYT1LQ9UL68 1186 aa24.09■■□□□ 1.45
TRAF4-201ENST00000262395 KIAA0556O60303 1618 aa24.09■■□□□ 1.45
TRAF4-201ENST00000262395 FBLN2P98095 1184 aa24.09■■□□□ 1.45
TRAF4-201ENST00000262395 KDM5CP41229 1560 aa24.08■■□□□ 1.45
TRAF4-201ENST00000262395 RAPGEF6Q8TEU7 1601 aa24.07■■□□□ 1.44
TRAF4-201ENST00000262395 PLB1Q6P1J6 1458 aa24.07■■□□□ 1.44
TRAF4-201ENST00000262395 GPATCH8Q9UKJ3 1502 aaKnown RBP24.06■■□□□ 1.44
TRAF4-201ENST00000262395 ANKRD30AQ9BXX3 1397 aa24.05■■□□□ 1.44
TRAF4-201ENST00000262395 TROQ12816 1431 aaPredicted RBP24.05■■□□□ 1.44
TRAF4-201ENST00000262395 ANKRD50Q9ULJ7 1429 aa24.05■■□□□ 1.44
TRAF4-201ENST00000262395 KIF15Q9NS87 1388 aa24.05■■□□□ 1.44
TRAF4-201ENST00000262395 RRP1P56182 461 aaKnown RBP24.04■■□□□ 1.44
TRAF4-201ENST00000262395 KIAA0586Q9BVV6 1533 aa24.04■■□□□ 1.44
TRAF4-201ENST00000262395 KIF14Q15058 1648 aa24.03■■□□□ 1.44
TRAF4-201ENST00000262395 MYBBP1AQ9BQG0 1328 aaKnown RBP24.03■■□□□ 1.44
TRAF4-201ENST00000262395 RCAN3Q9UKA8 241 aa24.02■■□□□ 1.44
TRAF4-201ENST00000262395 ARID4BQ4LE39 1312 aaPredicted RBP24.01■■□□□ 1.43
TRAF4-201ENST00000262395 RTL5Q5HYW3 569 aaPredicted RBP24.01■■□□□ 1.43
TRAF4-201ENST00000262395 SKAP1Q86WV1 359 aa24.01■■□□□ 1.43
TRAF4-201ENST00000262395 CDCA7LQ96GN5 454 aa24.01■■□□□ 1.43
TRAF4-201ENST00000262395 ROCK2O75116 1388 aaKnown RBP24■■□□□ 1.43
TRAF4-201ENST00000262395 RGL3Q3MIN7 710 aa24■■□□□ 1.43
TRAF4-201ENST00000262395 PLIN1O60240 522 aa23.99■■□□□ 1.43
TRAF4-201ENST00000262395 LRPPRCP42704 1394 aaKnown RBP23.98■■□□□ 1.43
TRAF4-201ENST00000262395 HNRNPMP52272 730 aaKnown RBP eCLIP23.97■■□□□ 1.43
TRAF4-201ENST00000262395 LAS1LQ9Y4W2 734 aaKnown RBP23.97■■□□□ 1.43
TRAF4-201ENST00000262395 RALGAPBQ86X10 1494 aa23.97■■□□□ 1.43
TRAF4-201ENST00000262395 RALBP1Q15311 655 aa23.96■■□□□ 1.43
TRAF4-201ENST00000262395 CC2D1BQ5T0F9 858 aaKnown RBP23.96■■□□□ 1.43
TRAF4-201ENST00000262395 BRD4O60885 1362 aaPredicted RBP23.96■■□□□ 1.43
TRAF4-201ENST00000262395 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.42
TRAF4-201ENST00000262395 ADGBQ8N7X0 1667 aa23.95■■□□□ 1.42
TRAF4-201ENST00000262395 MRC2Q9UBG0 1479 aa23.95■■□□□ 1.42
TRAF4-201ENST00000262395 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms