RNA–Protein interactions for RNA: ENST00000262101.9

MSR1-201, Transcript of macrophage scavenger receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSR1, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-201ENST00000262101 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
MSR1-201ENST00000262101 PHLDB1Q86UU1 1377 aa22.77■■□□□ 1.24
MSR1-201ENST00000262101 ARAP3Q8WWN8 1544 aa22.76■■□□□ 1.23
MSR1-201ENST00000262101 NCOA2Q15596 1464 aa22.76■■□□□ 1.23
MSR1-201ENST00000262101 PPARGC1BQ86YN6 1023 aaKnown RBP22.76■■□□□ 1.23
MSR1-201ENST00000262101 CDC42BPBQ9Y5S2 1711 aa22.75■■□□□ 1.23
MSR1-201ENST00000262101 CFDP1Q9UEE9 299 aaPredicted RBP22.75■■□□□ 1.23
MSR1-201ENST00000262101 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
MSR1-201ENST00000262101 SCAPERQ9BY12 1400 aa22.73■■□□□ 1.23
MSR1-201ENST00000262101 ZNF644Q9H582 1327 aaPredicted RBP22.72■■□□□ 1.23
MSR1-201ENST00000262101 ADGRL1O94910 1474 aa22.72■■□□□ 1.23
MSR1-201ENST00000262101 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
MSR1-201ENST00000262101 SUPT6HQ7KZ85 1726 aaKnown RBP22.71■■□□□ 1.23
MSR1-201ENST00000262101 AFAP1Q8N556 730 aa22.69■■□□□ 1.22
MSR1-201ENST00000262101 DENND4BO75064 1496 aaPredicted RBP22.69■■□□□ 1.22
MSR1-201ENST00000262101 HNRNPMP52272 730 aaKnown RBP eCLIP22.67■■□□□ 1.22
MSR1-201ENST00000262101 CFAP74Q9C0B2 1584 aa22.67■■□□□ 1.22
MSR1-201ENST00000262101 ARHGEF12Q9NZN5 1544 aa22.66■■□□□ 1.22
MSR1-201ENST00000262101 FRMPD1Q5SYB0 1578 aa22.64■■□□□ 1.21
MSR1-201ENST00000262101 SAMD9LQ8IVG5 1584 aa22.62■■□□□ 1.21
MSR1-201ENST00000262101 TRAPPC8Q9Y2L5 1435 aa22.62■■□□□ 1.21
MSR1-201ENST00000262101 POGZQ7Z3K3 1410 aa22.61■■□□□ 1.21
MSR1-201ENST00000262101 RICTORQ6R327 1708 aa22.6■■□□□ 1.21
MSR1-201ENST00000262101 ABCC1P33527 1531 aa22.59■■□□□ 1.21
MSR1-201ENST00000262101 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
MSR1-201ENST00000262101 ITSN2Q9NZM3 1697 aa22.57■■□□□ 1.2
MSR1-201ENST00000262101 SYCP2Q9BX26 1530 aa22.57■■□□□ 1.2
MSR1-201ENST00000262101 MYT1LQ9UL68 1186 aa22.56■■□□□ 1.2
MSR1-201ENST00000262101 ZNF518AQ6AHZ1 1483 aa22.55■■□□□ 1.2
MSR1-201ENST00000262101 YEATS2Q9ULM3 1422 aa22.55■■□□□ 1.2
MSR1-201ENST00000262101 KIAA1107Q9UPP5 1409 aa22.54■■□□□ 1.2
MSR1-201ENST00000262101 CAMSAP2Q08AD1 1489 aa22.52■■□□□ 1.2
MSR1-201ENST00000262101 MBD5Q9P267 1494 aa22.52■■□□□ 1.2
MSR1-201ENST00000262101 MIA2Q96PC5 1412 aa22.5■■□□□ 1.19
MSR1-201ENST00000262101 PLEKHH2Q8IVE3 1493 aa22.5■■□□□ 1.19
MSR1-201ENST00000262101 ZMYM4Q5VZL5 1548 aa22.49■■□□□ 1.19
MSR1-201ENST00000262101 KDM5CP41229 1560 aa22.48■■□□□ 1.19
MSR1-201ENST00000262101 SPAG9O60271 1321 aaKnown RBP22.48■■□□□ 1.19
MSR1-201ENST00000262101 FGD6Q6ZV73 1430 aa22.47■■□□□ 1.19
MSR1-201ENST00000262101 MAGI2Q86UL8 1455 aa22.46■■□□□ 1.19
MSR1-201ENST00000262101 ZFYVE16Q7Z3T8 1539 aa22.45■■□□□ 1.18
MSR1-201ENST00000262101 MLH3Q9UHC1 1453 aa22.45■■□□□ 1.18
MSR1-201ENST00000262101 ARID4BQ4LE39 1312 aaPredicted RBP22.43■■□□□ 1.18
MSR1-201ENST00000262101 KDM4FA0A1W2PPD8 638 aa22.43■■□□□ 1.18
MSR1-201ENST00000262101 FAM50AQ14320 339 aaKnown RBP22.43■■□□□ 1.18
MSR1-201ENST00000262101 RSPH4AQ5TD94 716 aa22.42■■□□□ 1.18
MSR1-201ENST00000262101 PTPN23Q9H3S7 1636 aa22.42■■□□□ 1.18
MSR1-201ENST00000262101 ARHGEF40Q8TER5 1519 aa22.41■■□□□ 1.18
MSR1-201ENST00000262101 HECW2Q9P2P5 1572 aa22.41■■□□□ 1.18
MSR1-201ENST00000262101 TSPY4P0CV99 314 aa22.4■■□□□ 1.18
MSR1-201ENST00000262101 TSPY10P0CW01 314 aa22.4■■□□□ 1.18
MSR1-201ENST00000262101 CCDC141Q6ZP82 1450 aa22.4■■□□□ 1.18
MSR1-201ENST00000262101 KIDINS220Q9ULH0 1771 aa22.4■■□□□ 1.18
MSR1-201ENST00000262101 ATP10AO60312 1499 aa22.4■■□□□ 1.18
MSR1-201ENST00000262101 SIGLEC1Q9BZZ2 1709 aa22.37■■□□□ 1.17
MSR1-201ENST00000262101 TCOF1Q13428 1488 aaKnown RBP22.37■■□□□ 1.17
MSR1-201ENST00000262101 DIP2CQ9Y2E4 1556 aa22.36■■□□□ 1.17
MSR1-201ENST00000262101 MLECQ14165 292 aa22.36■■□□□ 1.17
MSR1-201ENST00000262101 ABCA6Q8N139 1617 aa22.36■■□□□ 1.17
MSR1-201ENST00000262101 ATP7AQ04656 1500 aa22.36■■□□□ 1.17
MSR1-201ENST00000262101 ARHGEF5Q12774 1597 aa22.35■■□□□ 1.17
MSR1-201ENST00000262101 ABCC5O15440 1437 aa22.35■■□□□ 1.17
MSR1-201ENST00000262101 C9orf84Q5VXU9 1444 aa22.34■■□□□ 1.17
MSR1-201ENST00000262101 CHIC2Q9UKJ5 165 aa22.34■■□□□ 1.17
MSR1-201ENST00000262101 INO80Q9ULG1 1556 aaPredicted RBP22.33■■□□□ 1.16
MSR1-201ENST00000262101 RTEL1-TNFRSF6BF6WH68 1400 aa22.32■■□□□ 1.16
MSR1-201ENST00000262101 DAPK1P53355 1430 aa22.31■■□□□ 1.16
MSR1-201ENST00000262101 ITGAEP38570 1179 aa22.3■■□□□ 1.16
MSR1-201ENST00000262101 RRP7BPQ9NSQ0 103 aa22.27■■□□□ 1.16
MSR1-201ENST00000262101 A2MP01023 1474 aa22.27■■□□□ 1.15
MSR1-201ENST00000262101 DNMT1P26358 1616 aaKnown RBP22.25■■□□□ 1.15
MSR1-201ENST00000262101 PTPRKQ15262 1439 aa22.25■■□□□ 1.15
MSR1-201ENST00000262101 DHX29Q7Z478 1369 aaKnown RBP22.24■■□□□ 1.15
MSR1-201ENST00000262101 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
MSR1-201ENST00000262101 REREQ9P2R6 1566 aa22.22■■□□□ 1.15
MSR1-201ENST00000262101 BCORL1Q5H9F3 1711 aa22.22■■□□□ 1.15
MSR1-201ENST00000262101 GGT6Q6P531 493 aa22.21■■□□□ 1.15
MSR1-201ENST00000262101 MAST1Q9Y2H9 1570 aa22.21■■□□□ 1.15
MSR1-201ENST00000262101 KIF3BO15066 747 aa22.2■■□□□ 1.14
MSR1-201ENST00000262101 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.14
MSR1-201ENST00000262101 SHANK2Q9UPX8 1470 aa22.19■■□□□ 1.14
MSR1-201ENST00000262101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.19■■□□□ 1.14
MSR1-201ENST00000262101 AGLP35573 1532 aa22.19■■□□□ 1.14
MSR1-201ENST00000262101 PLXNC1O60486 1568 aa22.19■■□□□ 1.14
MSR1-201ENST00000262101 CROCC2H7BZ55 1655 aa22.19■■□□□ 1.14
MSR1-201ENST00000262101 ADGBQ8N7X0 1667 aa22.19■■□□□ 1.14
MSR1-201ENST00000262101 ADAMTSL3P82987 1691 aa22.18■■□□□ 1.14
MSR1-201ENST00000262101 NCOA1Q15788 1441 aa22.18■■□□□ 1.14
MSR1-201ENST00000262101 KIF15Q9NS87 1388 aa22.18■■□□□ 1.14
MSR1-201ENST00000262101 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
MSR1-201ENST00000262101 ANKRD30AQ9BXX3 1397 aa22.16■■□□□ 1.14
MSR1-201ENST00000262101 MADDQ8WXG6 1647 aa22.15■■□□□ 1.14
MSR1-201ENST00000262101 CEBPAP49715 358 aaPredicted RBP22.12■■□□□ 1.13
MSR1-201ENST00000262101 ADGRL2O95490 1459 aa22.1■■□□□ 1.13
MSR1-201ENST00000262101 PTPRMP28827 1452 aa22.1■■□□□ 1.13
MSR1-201ENST00000262101 DUOX2Q9NRD8 1548 aa22.1■■□□□ 1.13
MSR1-201ENST00000262101 ESF1Q9H501 851 aaKnown RBP22.09■■□□□ 1.13
MSR1-201ENST00000262101 RIMS1Q86UR5 1692 aaKnown RBP22.08■■□□□ 1.12
MSR1-201ENST00000262101 FER1L4A9Z1Z3 1794 aa22.06■■□□□ 1.12
MSR1-201ENST00000262101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms