RNA–Protein interactions for RNA: ENST00000262039.8

PIK3C3-201, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIK3C3, Length 9,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-201ENST00000262039 CCDC34Q96HJ3 373 aa6.5□□□□□ -1.37
PIK3C3-201ENST00000262039 HMGN5P82970 282 aaKnown RBP6.49□□□□□ -1.37
PIK3C3-201ENST00000262039 TPD52L1Q16890 204 aaPredicted RBP6.49□□□□□ -1.37
PIK3C3-201ENST00000262039 TPM2P07951 284 aa6.49□□□□□ -1.37
PIK3C3-201ENST00000262039 RSPH4AQ5TD94 716 aa6.49□□□□□ -1.37
PIK3C3-201ENST00000262039 TSR1Q2NL82 804 aaKnown RBP6.49□□□□□ -1.37
PIK3C3-201ENST00000262039 HRCP23327 699 aa6.49□□□□□ -1.37
PIK3C3-201ENST00000262039 FAM9BQ8IZU0 186 aa6.49□□□□□ -1.37
PIK3C3-201ENST00000262039 FRAT2O75474 233 aaPredicted RBP6.49□□□□□ -1.37
PIK3C3-201ENST00000262039 TMEM132AQ24JP5 1023 aa6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 CCDC43Q96MW1 224 aaKnown RBP6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 MAP7D2Q96T17 732 aa6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 TMC1Q8TDI8 760 aa6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 STAC3Q96MF2 364 aa6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 CCDC70Q6NSX1 233 aa6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 MCCP23508 829 aa6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 ZRSR2Q15696 482 aaKnown RBP6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 PLCD3Q8N3E9 789 aa6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 CCAR2Q8N163 923 aaKnown RBP6.48□□□□□ -1.37
PIK3C3-201ENST00000262039 CT47A1Q5JQC4 288 aaPredicted RBP6.47□□□□□ -1.37
PIK3C3-201ENST00000262039 ZFYVE27Q5T4F4 411 aa6.47□□□□□ -1.37
PIK3C3-201ENST00000262039 PHF14O94880 888 aa6.47□□□□□ -1.37
PIK3C3-201ENST00000262039 MIER1Q8N108 512 aa6.46□□□□□ -1.37
PIK3C3-201ENST00000262039 TRHP20396 242 aaPredicted RBP6.46□□□□□ -1.37
PIK3C3-201ENST00000262039 SPRYD3Q8NCJ5 442 aa6.46□□□□□ -1.37
PIK3C3-201ENST00000262039 GORABQ5T7V8 394 aa6.46□□□□□ -1.38
PIK3C3-201ENST00000262039 FBXW7Q969H0 707 aa6.46□□□□□ -1.38
PIK3C3-201ENST00000262039 PLCD4Q9BRC7 762 aa6.46□□□□□ -1.38
PIK3C3-201ENST00000262039 GRIPAP1Q4V328 841 aa6.46□□□□□ -1.38
PIK3C3-201ENST00000262039 CHMP3Q9Y3E7 222 aa6.46□□□□□ -1.38
PIK3C3-201ENST00000262039 TMEM87AQ8NBN3 555 aa6.45□□□□□ -1.38
PIK3C3-201ENST00000262039 HSP90AB2PQ58FF8 381 aa6.45□□□□□ -1.38
PIK3C3-201ENST00000262039 SAMD1Q6SPF0 538 aaPredicted RBP6.45□□□□□ -1.38
PIK3C3-201ENST00000262039 CFAP44Q96MT7 982 aa6.45□□□□□ -1.38
PIK3C3-201ENST00000262039 PCMTD1Q96MG8 357 aaPredicted RBP6.44□□□□□ -1.38
PIK3C3-201ENST00000262039 GTF2E1P29083 439 aaPredicted RBP6.43□□□□□ -1.38
PIK3C3-201ENST00000262039 RDXP35241 583 aaKnown RBP6.43□□□□□ -1.38
PIK3C3-201ENST00000262039 NEXNQ0ZGT2 675 aa6.43□□□□□ -1.38
PIK3C3-201ENST00000262039 DDX23Q9BUQ8 820 aaKnown RBP6.43□□□□□ -1.38
PIK3C3-201ENST00000262039 FOXD1Q16676 465 aa6.43□□□□□ -1.38
PIK3C3-201ENST00000262039 KIAA1211Q6ZU35 1233 aa6.43□□□□□ -1.38
PIK3C3-201ENST00000262039 GOLGA6L3A6NEY3 463 aa6.43□□□□□ -1.38
PIK3C3-201ENST00000262039 RSPH6AQ9H0K4 717 aa6.42□□□□□ -1.38
PIK3C3-201ENST00000262039 TEX35Q5T0J7 233 aa6.42□□□□□ -1.38
PIK3C3-201ENST00000262039 ANKRD62A6NC57 917 aa6.42□□□□□ -1.38
PIK3C3-201ENST00000262039 NOL10Q9BSC4 688 aaKnown RBP6.42□□□□□ -1.38
PIK3C3-201ENST00000262039 RTN4Q9NQC3 1192 aaKnown RBP6.42□□□□□ -1.38
PIK3C3-201ENST00000262039 SOGA3Q5TF21 947 aa6.41□□□□□ -1.38
PIK3C3-201ENST00000262039 AMOTL1Q8IY63 956 aa6.41□□□□□ -1.38
PIK3C3-201ENST00000262039 PABPN1Q86U42 306 aaKnown RBP eCLIP6.41□□□□□ -1.38
PIK3C3-201ENST00000262039 CCDC191Q8NCU4 936 aa6.41□□□□□ -1.38
PIK3C3-201ENST00000262039 HNRNPUQ00839 825 aaKnown RBP eCLIP6.41□□□□□ -1.38
PIK3C3-201ENST00000262039 CFAP53Q96M91 514 aa6.41□□□□□ -1.38
PIK3C3-201ENST00000262039 TOMM22Q9NS69 142 aa6.41□□□□□ -1.38
PIK3C3-201ENST00000262039 KDM2AQ9Y2K7 1162 aa6.41□□□□□ -1.38
PIK3C3-201ENST00000262039 NEFHP12036 1026 aa6.4□□□□□ -1.38
PIK3C3-201ENST00000262039 CSB-PGBD3P0DP91 1061 aa6.4□□□□□ -1.38
PIK3C3-201ENST00000262039 IBSPP21815 317 aaPredicted RBP6.4□□□□□ -1.38
PIK3C3-201ENST00000262039 ZWINTO95229 277 aa6.4□□□□□ -1.38
PIK3C3-201ENST00000262039 UQCRHLA0A096LP55 91 aa6.4□□□□□ -1.39
PIK3C3-201ENST00000262039 NEBLO76041 1014 aa6.4□□□□□ -1.39
PIK3C3-201ENST00000262039 TPM1P09493 284 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 MRS2Q9HD23 443 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 MAPK8IP3Q9UPT6 1336 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 SOX12O15370 315 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 HOMER2Q9NSB8 354 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 DIAPH3Q9NSV4 1193 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 GPS2Q13227 327 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 EPS15P42566 896 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 NAP1L1P55209 391 aaKnown RBP6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 NF2P35240 595 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 RUFY1Q96T51 708 aa6.39□□□□□ -1.39
PIK3C3-201ENST00000262039 CCDC175P0C221 793 aa6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 ZMYND15Q9H091 742 aa6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 PPP1R1BQ9UD71 204 aaPredicted RBP6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 HSP90AA2PQ14568 343 aaPredicted RBP6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 CDR1P51861 262 aa6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 SEPT7Q16181 437 aaKnown RBP6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 SRPK2P78362 688 aaKnown RBP6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 CALD1Q05682 793 aaKnown RBP6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 SUPT16HQ9Y5B9 1047 aaKnown RBP6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 VGFO15240 615 aaPredicted RBP6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 AKAP17AQ02040 695 aaKnown RBP6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 HSCBQ8IWL3 235 aa6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 CLASRPQ8N2M8 674 aaKnown RBP6.38□□□□□ -1.39
PIK3C3-201ENST00000262039 ANKRD18AQ8IVF6 992 aa6.37□□□□□ -1.39
PIK3C3-201ENST00000262039 GPATCH3Q96I76 525 aa6.37□□□□□ -1.39
PIK3C3-201ENST00000262039 NISCHQ9Y2I1 1504 aa6.37□□□□□ -1.39
PIK3C3-201ENST00000262039 CCDC112Q8NEF3 446 aa6.37□□□□□ -1.39
PIK3C3-201ENST00000262039 CCDC173Q0VFZ6 552 aa6.37□□□□□ -1.39
PIK3C3-201ENST00000262039 CHMP4BQ9H444 224 aaKnown RBP6.37□□□□□ -1.39
PIK3C3-201ENST00000262039 SEPT10Q9P0V9 454 aa6.37□□□□□ -1.39
PIK3C3-201ENST00000262039 DHX16O60231 1041 aaKnown RBP6.36□□□□□ -1.39
PIK3C3-201ENST00000262039 PAK3O75914 559 aaPredicted RBP6.36□□□□□ -1.39
PIK3C3-201ENST00000262039 SKIDA1Q1XH10 827 aa6.36□□□□□ -1.39
PIK3C3-201ENST00000262039 RTF1Q92541 710 aaKnown RBP6.36□□□□□ -1.39
PIK3C3-201ENST00000262039 HSP90AB4PQ58FF6 505 aa6.36□□□□□ -1.39
PIK3C3-201ENST00000262039 DCTN1Q14203 1278 aa6.35□□□□□ -1.39
PIK3C3-201ENST00000262039 PUS7Q96PZ0 661 aaKnown RBP6.35□□□□□ -1.39
PIK3C3-201ENST00000262039 ZNF710Q8N1W2 664 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms