RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 CYB5RLQ6IPT4 315 aa10.76□□□□□ -0.69
CCNT1-201ENST00000261900 CALD1Q05682 793 aaKnown RBP10.76□□□□□ -0.69
CCNT1-201ENST00000261900 MCCP23508 829 aa10.76□□□□□ -0.69
CCNT1-201ENST00000261900 CWC22Q9HCG8 908 aaKnown RBP10.76□□□□□ -0.69
CCNT1-201ENST00000261900 SPAG9O60271 1321 aaKnown RBP10.75□□□□□ -0.69
CCNT1-201ENST00000261900 SF3B2Q13435 895 aaKnown RBP10.75□□□□□ -0.69
CCNT1-201ENST00000261900 HIRIP3Q9BW71 556 aaPredicted RBP10.75□□□□□ -0.69
CCNT1-201ENST00000261900 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.75□□□□□ -0.69
CCNT1-201ENST00000261900 DDRGK1Q96HY6 314 aa10.75□□□□□ -0.69
CCNT1-201ENST00000261900 DCAF11Q8TEB1 546 aa10.75□□□□□ -0.69
CCNT1-201ENST00000261900 CTDP1Q9Y5B0 961 aaPredicted RBP10.74□□□□□ -0.69
CCNT1-201ENST00000261900 KIAA2012Q0VF49 1180 aa10.74□□□□□ -0.69
CCNT1-201ENST00000261900 KIAA1211Q6ZU35 1233 aa10.74□□□□□ -0.69
CCNT1-201ENST00000261900 STK31Q9BXU1 1019 aa10.74□□□□□ -0.69
CCNT1-201ENST00000261900 PLCB2Q00722 1185 aa10.73□□□□□ -0.69
CCNT1-201ENST00000261900 AMPHP49418 695 aa10.73□□□□□ -0.69
CCNT1-201ENST00000261900 CNKSR2Q8WXI2 1034 aa10.73□□□□□ -0.69
CCNT1-201ENST00000261900 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
CCNT1-201ENST00000261900 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
CCNT1-201ENST00000261900 CC2D1BQ5T0F9 858 aaKnown RBP10.72□□□□□ -0.69
CCNT1-201ENST00000261900 KIF3BO15066 747 aa10.72□□□□□ -0.69
CCNT1-201ENST00000261900 CCDC34Q96HJ3 373 aa10.71□□□□□ -0.69
CCNT1-201ENST00000261900 VPS53Q5VIR6 699 aa10.71□□□□□ -0.7
CCNT1-201ENST00000261900 TRIM34Q9BYJ4 488 aa10.71□□□□□ -0.7
CCNT1-201ENST00000261900 PDS5BQ9NTI5 1447 aa10.71□□□□□ -0.7
CCNT1-201ENST00000261900 OSCARQ8IYS5 282 aa10.71□□□□□ -0.7
CCNT1-201ENST00000261900 GLIPR1L2Q4G1C9 344 aa10.7□□□□□ -0.7
CCNT1-201ENST00000261900 DNTTIP2Q5QJE6 756 aaKnown RBP10.7□□□□□ -0.7
CCNT1-201ENST00000261900 MARCH6O60337 910 aa10.7□□□□□ -0.7
CCNT1-201ENST00000261900 TERF2IPQ9NYB0 399 aa10.7□□□□□ -0.7
CCNT1-201ENST00000261900 EIF4G1Q04637 1599 aaKnown RBP10.7□□□□□ -0.7
CCNT1-201ENST00000261900 IPO8O15397 1037 aaKnown RBP10.69□□□□□ -0.7
CCNT1-201ENST00000261900 WRNQ14191 1432 aaPredicted RBP eCLIP10.69□□□□□ -0.7
CCNT1-201ENST00000261900 EEA1Q15075 1411 aa10.69□□□□□ -0.7
CCNT1-201ENST00000261900 LTV1Q96GA3 475 aaPredicted RBP10.69□□□□□ -0.7
CCNT1-201ENST00000261900 WASHC2AQ641Q2 1341 aa10.69□□□□□ -0.7
CCNT1-201ENST00000261900 NOL10Q9BSC4 688 aaKnown RBP10.68□□□□□ -0.7
CCNT1-201ENST00000261900 RASSF8Q8NHQ8 419 aa10.67□□□□□ -0.7
CCNT1-201ENST00000261900 GPATCH3Q96I76 525 aa10.67□□□□□ -0.7
CCNT1-201ENST00000261900 HSP90AB1P08238 724 aaKnown RBP10.67□□□□□ -0.7
CCNT1-201ENST00000261900 TCEAL9Q9UHQ7 104 aa10.67□□□□□ -0.7
CCNT1-201ENST00000261900 TOMM22Q9NS69 142 aa10.67□□□□□ -0.7
CCNT1-201ENST00000261900 NUTM2FA1L443 756 aa10.66□□□□□ -0.7
CCNT1-201ENST00000261900 U2AF1L5P0DN76 240 aaPredicted RBP10.66□□□□□ -0.7
CCNT1-201ENST00000261900 U2AF1Q01081 240 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCNT1-201ENST00000261900 CEP89Q96ST8 783 aa10.66□□□□□ -0.7
CCNT1-201ENST00000261900 AMOTL1Q8IY63 956 aa10.65□□□□□ -0.7
CCNT1-201ENST00000261900 SYTL4Q96C24 671 aaPredicted RBP10.65□□□□□ -0.7
CCNT1-201ENST00000261900 IRX6P78412 446 aaPredicted RBP10.64□□□□□ -0.71
CCNT1-201ENST00000261900 SENP3-EIF4A1A0A087X0R7 540 aa10.64□□□□□ -0.71
CCNT1-201ENST00000261900 HTATSF1O43719 755 aaKnown RBP10.64□□□□□ -0.71
CCNT1-201ENST00000261900 RGS3P49796 1198 aa10.64□□□□□ -0.71
CCNT1-201ENST00000261900 APBB1O00213 710 aa10.64□□□□□ -0.71
CCNT1-201ENST00000261900 ATF3P18847 181 aa10.64□□□□□ -0.71
CCNT1-201ENST00000261900 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
CCNT1-201ENST00000261900 C1orf141Q5JVX7 400 aa10.64□□□□□ -0.71
CCNT1-201ENST00000261900 GOLGA3Q08378 1498 aa10.63□□□□□ -0.71
CCNT1-201ENST00000261900 NBR1Q14596 966 aa10.63□□□□□ -0.71
CCNT1-201ENST00000261900 CARMIL1Q5VZK9 1371 aa10.62□□□□□ -0.71
CCNT1-201ENST00000261900 LMOD3Q0VAK6 560 aa10.62□□□□□ -0.71
CCNT1-201ENST00000261900 TTC5Q8N0Z6 440 aa10.61□□□□□ -0.71
CCNT1-201ENST00000261900 NOC3LQ8WTT2 800 aaKnown RBP10.61□□□□□ -0.71
CCNT1-201ENST00000261900 ANO8Q9HCE9 1232 aaPredicted RBP10.61□□□□□ -0.71
CCNT1-201ENST00000261900 HMMRO75330 724 aa10.6□□□□□ -0.71
CCNT1-201ENST00000261900 RSPH4AQ5TD94 716 aa10.6□□□□□ -0.71
CCNT1-201ENST00000261900 RAD21O60216 631 aa10.6□□□□□ -0.71
CCNT1-201ENST00000261900 PPP1R1BQ9UD71 204 aaPredicted RBP10.6□□□□□ -0.71
CCNT1-201ENST00000261900 PKD2Q13563 968 aa10.6□□□□□ -0.71
CCNT1-201ENST00000261900 FBXW7Q969H0 707 aa10.6□□□□□ -0.71
CCNT1-201ENST00000261900 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
CCNT1-201ENST00000261900 TEFQ10587 303 aa10.59□□□□□ -0.71
CCNT1-201ENST00000261900 CCAR1Q8IX12 1150 aaKnown RBP10.59□□□□□ -0.71
CCNT1-201ENST00000261900 PSME1Q06323 249 aa10.58□□□□□ -0.72
CCNT1-201ENST00000261900 CUX2O14529 1486 aa10.58□□□□□ -0.72
CCNT1-201ENST00000261900 FAM69CQ0P6D2 419 aa10.58□□□□□ -0.72
CCNT1-201ENST00000261900 PDE4CQ08493 712 aa10.57□□□□□ -0.72
CCNT1-201ENST00000261900 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
CCNT1-201ENST00000261900 RBM33Q96EV2 1170 aaKnown RBP10.57□□□□□ -0.72
CCNT1-201ENST00000261900 NUTM2DQ5VT03 806 aaPredicted RBP10.57□□□□□ -0.72
CCNT1-201ENST00000261900 HSCBQ8IWL3 235 aa10.57□□□□□ -0.72
CCNT1-201ENST00000261900 DRC7Q8IY82 874 aa10.56□□□□□ -0.72
CCNT1-201ENST00000261900 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
CCNT1-201ENST00000261900 LRRFIP1Q32MZ4 808 aaKnown RBP10.56□□□□□ -0.72
CCNT1-201ENST00000261900 SLC4A10Q6U841 1118 aa10.56□□□□□ -0.72
CCNT1-201ENST00000261900 NEXNQ0ZGT2 675 aa10.55□□□□□ -0.72
CCNT1-201ENST00000261900 CECR2Q9BXF3 1484 aa10.55□□□□□ -0.72
CCNT1-201ENST00000261900 AKAP17AQ02040 695 aaKnown RBP10.55□□□□□ -0.72
CCNT1-201ENST00000261900 KIF3AQ9Y496 699 aa10.55□□□□□ -0.72
CCNT1-201ENST00000261900 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
CCNT1-201ENST00000261900 NUP155O75694 1391 aa10.55□□□□□ -0.72
CCNT1-201ENST00000261900 ANKRD30AQ9BXX3 1397 aa10.55□□□□□ -0.72
CCNT1-201ENST00000261900 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCNT1-201ENST00000261900 NACADO15069 1562 aa10.54□□□□□ -0.72
CCNT1-201ENST00000261900 WWC1Q8IX03 1113 aa10.54□□□□□ -0.72
CCNT1-201ENST00000261900 VGFO15240 615 aaPredicted RBP10.54□□□□□ -0.72
CCNT1-201ENST00000261900 TPM4P67936 248 aa10.54□□□□□ -0.72
CCNT1-201ENST00000261900 CCDC43Q96MW1 224 aaKnown RBP10.53□□□□□ -0.72
CCNT1-201ENST00000261900 COG3Q96JB2 828 aa10.53□□□□□ -0.72
CCNT1-201ENST00000261900 JPH4Q96JJ6 628 aa10.53□□□□□ -0.72
CCNT1-201ENST00000261900 SMC4Q9NTJ3 1288 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms