RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 GOLGA6L1Q8N7Z2 621 aa13.63□□□□□ -0.23
SLC6A4-201ENST00000261707 MCCP23508 829 aa13.61□□□□□ -0.23
SLC6A4-201ENST00000261707 SYAP1Q96A49 352 aaPredicted RBP13.61□□□□□ -0.23
SLC6A4-201ENST00000261707 FGD1P98174 961 aa13.61□□□□□ -0.23
SLC6A4-201ENST00000261707 FOXD1Q16676 465 aa13.61□□□□□ -0.23
SLC6A4-201ENST00000261707 SETQ01105 290 aaPredicted RBP13.6□□□□□ -0.23
SLC6A4-201ENST00000261707 ZNF771Q7L3S4 317 aaPredicted RBP13.6□□□□□ -0.23
SLC6A4-201ENST00000261707 A0A0U1RQG5 324 aaPredicted RBP13.6□□□□□ -0.23
SLC6A4-201ENST00000261707 CLIP1P30622 1438 aa13.6□□□□□ -0.23
SLC6A4-201ENST00000261707 RRP7BPQ9NSQ0 103 aa13.59□□□□□ -0.23
SLC6A4-201ENST00000261707 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
SLC6A4-201ENST00000261707 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
SLC6A4-201ENST00000261707 KCNJ4P48050 445 aa13.59□□□□□ -0.23
SLC6A4-201ENST00000261707 OS9Q13438 667 aaPredicted RBP13.59□□□□□ -0.23
SLC6A4-201ENST00000261707 SOX12O15370 315 aa13.58□□□□□ -0.23
SLC6A4-201ENST00000261707 PLEKHD1A6NEE1 506 aa13.58□□□□□ -0.24
SLC6A4-201ENST00000261707 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
SLC6A4-201ENST00000261707 NAP1L2Q9ULW6 460 aaPredicted RBP13.58□□□□□ -0.24
SLC6A4-201ENST00000261707 MTUS2Q5JR59 1369 aa13.57□□□□□ -0.24
SLC6A4-201ENST00000261707 NOC3LQ8WTT2 800 aaKnown RBP13.57□□□□□ -0.24
SLC6A4-201ENST00000261707 MAPK8IP3Q9UPT6 1336 aa13.57□□□□□ -0.24
SLC6A4-201ENST00000261707 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
SLC6A4-201ENST00000261707 CARD11Q9BXL7 1154 aa13.56□□□□□ -0.24
SLC6A4-201ENST00000261707 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
SLC6A4-201ENST00000261707 SIN3AQ96ST3 1273 aa13.55□□□□□ -0.24
SLC6A4-201ENST00000261707 CALD1Q05682 793 aaKnown RBP13.55□□□□□ -0.24
SLC6A4-201ENST00000261707 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
SLC6A4-201ENST00000261707 CEP162Q5TB80 1403 aa13.54□□□□□ -0.24
SLC6A4-201ENST00000261707 CALRP27797 417 aaKnown RBP13.54□□□□□ -0.24
SLC6A4-201ENST00000261707 PODXL2Q9NZ53 605 aa13.54□□□□□ -0.24
SLC6A4-201ENST00000261707 FANCIQ9NVI1 1328 aa13.54□□□□□ -0.24
SLC6A4-201ENST00000261707 CWC22Q9HCG8 908 aaKnown RBP13.53□□□□□ -0.24
SLC6A4-201ENST00000261707 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.24
SLC6A4-201ENST00000261707 DDX11L8A8MPP1 907 aa13.52□□□□□ -0.25
SLC6A4-201ENST00000261707 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
SLC6A4-201ENST00000261707 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
SLC6A4-201ENST00000261707 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
SLC6A4-201ENST00000261707 TPM4P67936 248 aa13.5□□□□□ -0.25
SLC6A4-201ENST00000261707 MFAP1P55081 439 aaKnown RBP13.5□□□□□ -0.25
SLC6A4-201ENST00000261707 RGL3Q3MIN7 710 aa13.49□□□□□ -0.25
SLC6A4-201ENST00000261707 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
SLC6A4-201ENST00000261707 PHF14O94880 888 aa13.47□□□□□ -0.25
SLC6A4-201ENST00000261707 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
SLC6A4-201ENST00000261707 RWDD1Q9H446 243 aaPredicted RBP13.47□□□□□ -0.25
SLC6A4-201ENST00000261707 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
SLC6A4-201ENST00000261707 GOLGA3Q08378 1498 aa13.45□□□□□ -0.26
SLC6A4-201ENST00000261707 SLC4A3P48751 1232 aa13.44□□□□□ -0.26
SLC6A4-201ENST00000261707 APPP05067 770 aa13.44□□□□□ -0.26
SLC6A4-201ENST00000261707 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.44□□□□□ -0.26
SLC6A4-201ENST00000261707 CSPP1Q1MSJ5 1256 aa13.44□□□□□ -0.26
SLC6A4-201ENST00000261707 SF3B2Q13435 895 aaKnown RBP13.44□□□□□ -0.26
SLC6A4-201ENST00000261707 GNL2Q13823 731 aaKnown RBP13.44□□□□□ -0.26
SLC6A4-201ENST00000261707 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
SLC6A4-201ENST00000261707 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
SLC6A4-201ENST00000261707 GTF2E1P29083 439 aaPredicted RBP13.43□□□□□ -0.26
SLC6A4-201ENST00000261707 PDE4AP27815 886 aa13.42□□□□□ -0.26
SLC6A4-201ENST00000261707 TEX35Q5T0J7 233 aa13.42□□□□□ -0.26
SLC6A4-201ENST00000261707 FAM43AQ8N2R8 423 aa13.41□□□□□ -0.26
SLC6A4-201ENST00000261707 ZCCHC6Q5VYS8 1495 aaKnown RBP13.41□□□□□ -0.26
SLC6A4-201ENST00000261707 GPS2Q13227 327 aa13.41□□□□□ -0.26
SLC6A4-201ENST00000261707 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
SLC6A4-201ENST00000261707 U2SURPO15042 1029 aaKnown RBP13.4□□□□□ -0.26
SLC6A4-201ENST00000261707 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
SLC6A4-201ENST00000261707 EVA1CP58658 441 aa13.4□□□□□ -0.26
SLC6A4-201ENST00000261707 DDX49Q9Y6V7 483 aaKnown RBP13.39□□□□□ -0.27
SLC6A4-201ENST00000261707 HSPA5P11021 654 aaKnown RBP13.39□□□□□ -0.27
SLC6A4-201ENST00000261707 CTDP1Q9Y5B0 961 aaPredicted RBP13.39□□□□□ -0.27
SLC6A4-201ENST00000261707 SRPK2P78362 688 aaKnown RBP13.39□□□□□ -0.27
SLC6A4-201ENST00000261707 APBB1O00213 710 aa13.38□□□□□ -0.27
SLC6A4-201ENST00000261707 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
SLC6A4-201ENST00000261707 EEA1Q15075 1411 aa13.37□□□□□ -0.27
SLC6A4-201ENST00000261707 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
SLC6A4-201ENST00000261707 MAP7D2Q96T17 732 aa13.37□□□□□ -0.27
SLC6A4-201ENST00000261707 IPO8O15397 1037 aaKnown RBP13.37□□□□□ -0.27
SLC6A4-201ENST00000261707 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
SLC6A4-201ENST00000261707 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
SLC6A4-201ENST00000261707 VPS53Q5VIR6 699 aa13.36□□□□□ -0.27
SLC6A4-201ENST00000261707 HSP90B1P14625 803 aaKnown RBP13.36□□□□□ -0.27
SLC6A4-201ENST00000261707 TAF7LQ5H9L4 462 aa13.36□□□□□ -0.27
SLC6A4-201ENST00000261707 KANK1Q14678 1352 aa13.36□□□□□ -0.27
SLC6A4-201ENST00000261707 MTERF4Q7Z6M4 381 aaKnown RBP13.36□□□□□ -0.27
SLC6A4-201ENST00000261707 ZNF592Q92610 1267 aa13.36□□□□□ -0.27
SLC6A4-201ENST00000261707 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
SLC6A4-201ENST00000261707 SCRIBQ14160 1630 aa13.35□□□□□ -0.27
SLC6A4-201ENST00000261707 TPM3P06753 285 aa13.35□□□□□ -0.27
SLC6A4-201ENST00000261707 RTF1Q92541 710 aaKnown RBP13.35□□□□□ -0.27
SLC6A4-201ENST00000261707 FOXD4L5Q5VV16 416 aaPredicted RBP13.35□□□□□ -0.27
SLC6A4-201ENST00000261707 FOXD4L4Q8WXT5 416 aaPredicted RBP13.35□□□□□ -0.27
SLC6A4-201ENST00000261707 PPP1R1BQ9UD71 204 aaPredicted RBP13.35□□□□□ -0.27
SLC6A4-201ENST00000261707 TMF1P82094 1093 aa13.35□□□□□ -0.27
SLC6A4-201ENST00000261707 CCAR2Q8N163 923 aaKnown RBP13.35□□□□□ -0.27
SLC6A4-201ENST00000261707 PATL2C9JE40 543 aaKnown RBP13.34□□□□□ -0.27
SLC6A4-201ENST00000261707 FRAT2O75474 233 aaPredicted RBP13.34□□□□□ -0.27
SLC6A4-201ENST00000261707 TPM2P07951 284 aa13.34□□□□□ -0.27
SLC6A4-201ENST00000261707 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.27
SLC6A4-201ENST00000261707 KIF16BQ96L93 1317 aa13.33□□□□□ -0.28
SLC6A4-201ENST00000261707 ST18O60284 1047 aa13.33□□□□□ -0.28
SLC6A4-201ENST00000261707 NOL8Q76FK4 1167 aaKnown RBP13.33□□□□□ -0.28
SLC6A4-201ENST00000261707 IL27Q8NEV9 243 aa13.32□□□□□ -0.28
SLC6A4-201ENST00000261707 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms