RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 SOX12O15370 315 aa17.19■□□□□ 0.34
ALPK3-201ENST00000258888 KANK1Q14678 1352 aa17.19■□□□□ 0.34
ALPK3-201ENST00000258888 KTN1Q86UP2 1357 aaKnown RBP17.19■□□□□ 0.34
ALPK3-201ENST00000258888 KANK4Q5T7N3 995 aaPredicted RBP17.17■□□□□ 0.34
ALPK3-201ENST00000258888 SRPK2P78362 688 aaKnown RBP17.17■□□□□ 0.34
ALPK3-201ENST00000258888 GOLGA6L6A8MZA4 724 aa17.16■□□□□ 0.34
ALPK3-201ENST00000258888 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
ALPK3-201ENST00000258888 PKD2Q13563 968 aa17.15■□□□□ 0.34
ALPK3-201ENST00000258888 GOLGA6L4A6NEF3 574 aa17.14■□□□□ 0.33
ALPK3-201ENST00000258888 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.33
ALPK3-201ENST00000258888 APBB1O00213 710 aa17.13■□□□□ 0.33
ALPK3-201ENST00000258888 RAB3GAP2Q9H2M9 1393 aa17.13■□□□□ 0.33
ALPK3-201ENST00000258888 L1TD1Q5T7N2 865 aaKnown RBP17.12■□□□□ 0.33
ALPK3-201ENST00000258888 NPHP1O15259 732 aa17.11■□□□□ 0.33
ALPK3-201ENST00000258888 RCAN3Q9UKA8 241 aa17.11■□□□□ 0.33
ALPK3-201ENST00000258888 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
ALPK3-201ENST00000258888 NRDCO43847 1150 aa17.09■□□□□ 0.33
ALPK3-201ENST00000258888 MCCP23508 829 aa17.09■□□□□ 0.33
ALPK3-201ENST00000258888 SLKQ9H2G2 1235 aaPredicted RBP17.08■□□□□ 0.33
ALPK3-201ENST00000258888 MSNP26038 577 aaKnown RBP17.08■□□□□ 0.32
ALPK3-201ENST00000258888 CHAF1AQ13111 956 aaPredicted RBP17.08■□□□□ 0.32
ALPK3-201ENST00000258888 STK26Q9P289 416 aa17.07■□□□□ 0.32
ALPK3-201ENST00000258888 MLECQ14165 292 aa17.07■□□□□ 0.32
ALPK3-201ENST00000258888 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
ALPK3-201ENST00000258888 GOLGA2Q08379 1002 aa17.06■□□□□ 0.32
ALPK3-201ENST00000258888 ITPRIPQ8IWB1 547 aa17.06■□□□□ 0.32
ALPK3-201ENST00000258888 GZF1Q9H116 711 aaPredicted RBP17.05■□□□□ 0.32
ALPK3-201ENST00000258888 DRC7Q8IY82 874 aa17.05■□□□□ 0.32
ALPK3-201ENST00000258888 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
ALPK3-201ENST00000258888 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
ALPK3-201ENST00000258888 IPO8O15397 1037 aaKnown RBP17.02■□□□□ 0.32
ALPK3-201ENST00000258888 RALBP1Q15311 655 aa17.02■□□□□ 0.32
ALPK3-201ENST00000258888 NUP155O75694 1391 aa17.02■□□□□ 0.31
ALPK3-201ENST00000258888 MPHOSPH9Q99550 1183 aa17.01■□□□□ 0.31
ALPK3-201ENST00000258888 RTF1Q92541 710 aaKnown RBP17.01■□□□□ 0.31
ALPK3-201ENST00000258888 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
ALPK3-201ENST00000258888 TSHZ2Q9NRE2 1034 aa17■□□□□ 0.31
ALPK3-201ENST00000258888 TCERG1O14776 1098 aaKnown RBP16.99■□□□□ 0.31
ALPK3-201ENST00000258888 GBP4Q96PP9 640 aa16.99■□□□□ 0.31
ALPK3-201ENST00000258888 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
ALPK3-201ENST00000258888 GGT6Q6P531 493 aa16.99■□□□□ 0.31
ALPK3-201ENST00000258888 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
ALPK3-201ENST00000258888 HDGFL2Q7Z4V5 671 aaPredicted RBP16.99■□□□□ 0.31
ALPK3-201ENST00000258888 ARID3AQ99856 593 aa16.97■□□□□ 0.31
ALPK3-201ENST00000258888 MFAP1P55081 439 aaKnown RBP16.96■□□□□ 0.31
ALPK3-201ENST00000258888 FMN1Q68DA7 1419 aa16.96■□□□□ 0.31
ALPK3-201ENST00000258888 GNL2Q13823 731 aaKnown RBP16.96■□□□□ 0.31
ALPK3-201ENST00000258888 CCDC146Q8IYE0 955 aa16.95■□□□□ 0.3
ALPK3-201ENST00000258888 EIF3AQ14152 1382 aaKnown RBP16.94■□□□□ 0.3
ALPK3-201ENST00000258888 CFAP44Q96MT7 982 aa16.94■□□□□ 0.3
ALPK3-201ENST00000258888 ANKRD30AQ9BXX3 1397 aa16.94■□□□□ 0.3
ALPK3-201ENST00000258888 WIZO95785 1651 aa16.92■□□□□ 0.3
ALPK3-201ENST00000258888 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
ALPK3-201ENST00000258888 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
ALPK3-201ENST00000258888 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
ALPK3-201ENST00000258888 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
ALPK3-201ENST00000258888 IPO9Q96P70 1041 aaKnown RBP16.92■□□□□ 0.3
ALPK3-201ENST00000258888 ISY1Q9ULR0 285 aaKnown RBP16.92■□□□□ 0.3
ALPK3-201ENST00000258888 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
ALPK3-201ENST00000258888 CLUAP1Q96AJ1 413 aa16.91■□□□□ 0.3
ALPK3-201ENST00000258888 FHOD3Q2V2M9 1422 aa16.91■□□□□ 0.3
ALPK3-201ENST00000258888 CLSTN1O94985 981 aa16.9■□□□□ 0.3
ALPK3-201ENST00000258888 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
ALPK3-201ENST00000258888 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
ALPK3-201ENST00000258888 KIAA2012Q0VF49 1180 aa16.9■□□□□ 0.3
ALPK3-201ENST00000258888 PTMSP20962 102 aa16.88■□□□□ 0.29
ALPK3-201ENST00000258888 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
ALPK3-201ENST00000258888 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
ALPK3-201ENST00000258888 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
ALPK3-201ENST00000258888 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
ALPK3-201ENST00000258888 NLRP13Q86W25 1043 aa16.87■□□□□ 0.29
ALPK3-201ENST00000258888 SMARCA2P51531 1590 aa16.87■□□□□ 0.29
ALPK3-201ENST00000258888 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
ALPK3-201ENST00000258888 NOL8Q76FK4 1167 aaKnown RBP16.86■□□□□ 0.29
ALPK3-201ENST00000258888 GOLGA6L3A6NEY3 463 aa16.86■□□□□ 0.29
ALPK3-201ENST00000258888 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
ALPK3-201ENST00000258888 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
ALPK3-201ENST00000258888 SYAP1Q96A49 352 aaPredicted RBP16.84■□□□□ 0.29
ALPK3-201ENST00000258888 NUTM2DQ5VT03 806 aaPredicted RBP16.84■□□□□ 0.29
ALPK3-201ENST00000258888 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
ALPK3-201ENST00000258888 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.28
ALPK3-201ENST00000258888 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
ALPK3-201ENST00000258888 CSB-PGBD3P0DP91 1061 aa16.82■□□□□ 0.28
ALPK3-201ENST00000258888 RRP7AQ9Y3A4 280 aaKnown RBP16.82■□□□□ 0.28
ALPK3-201ENST00000258888 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
ALPK3-201ENST00000258888 SLC4A10Q6U841 1118 aa16.81■□□□□ 0.28
ALPK3-201ENST00000258888 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
ALPK3-201ENST00000258888 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
ALPK3-201ENST00000258888 HMMRO75330 724 aa16.8■□□□□ 0.28
ALPK3-201ENST00000258888 HNRNPMP52272 730 aaKnown RBP eCLIP16.8■□□□□ 0.28
ALPK3-201ENST00000258888 GPATCH3Q96I76 525 aa16.8■□□□□ 0.28
ALPK3-201ENST00000258888 TERF2IPQ9NYB0 399 aa16.8■□□□□ 0.28
ALPK3-201ENST00000258888 CHMP3Q9Y3E7 222 aa16.8■□□□□ 0.28
ALPK3-201ENST00000258888 HSP90B1P14625 803 aaKnown RBP16.8■□□□□ 0.28
ALPK3-201ENST00000258888 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
ALPK3-201ENST00000258888 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
ALPK3-201ENST00000258888 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
ALPK3-201ENST00000258888 KIF3BO15066 747 aa16.79■□□□□ 0.28
ALPK3-201ENST00000258888 PHLDB1Q86UU1 1377 aa16.78■□□□□ 0.28
ALPK3-201ENST00000258888 HTATSF1O43719 755 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms