RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 MYCNP04198 464 aaPredicted RBP10.25□□□□□ -0.77
GPNMB-201ENST00000258733 MAPK8IP2Q13387 824 aaPredicted RBP10.25□□□□□ -0.77
GPNMB-201ENST00000258733 CERS3Q8IU89 383 aa10.25□□□□□ -0.77
GPNMB-201ENST00000258733 ZHX1Q9UKY1 873 aaPredicted RBP10.25□□□□□ -0.77
GPNMB-201ENST00000258733 APPP05067 770 aa10.24□□□□□ -0.77
GPNMB-201ENST00000258733 SOX12O15370 315 aa10.24□□□□□ -0.77
GPNMB-201ENST00000258733 SMAP1Q8IYB5 467 aaPredicted RBP10.23□□□□□ -0.77
GPNMB-201ENST00000258733 ZBTB47Q9UFB7 747 aaPredicted RBP10.23□□□□□ -0.77
GPNMB-201ENST00000258733 ZNF526Q8TF50 670 aaPredicted RBP10.23□□□□□ -0.77
GPNMB-201ENST00000258733 DDRGK1Q96HY6 314 aa10.23□□□□□ -0.77
GPNMB-201ENST00000258733 OS9Q13438 667 aaPredicted RBP10.22□□□□□ -0.77
GPNMB-201ENST00000258733 PHF14O94880 888 aa10.22□□□□□ -0.77
GPNMB-201ENST00000258733 IPO9Q96P70 1041 aaKnown RBP10.22□□□□□ -0.77
GPNMB-201ENST00000258733 ANP32BQ92688 251 aaKnown RBP10.21□□□□□ -0.77
GPNMB-201ENST00000258733 PNNQ9H307 717 aaKnown RBP10.21□□□□□ -0.77
GPNMB-201ENST00000258733 RRAGDQ9NQL2 400 aaPredicted RBP10.21□□□□□ -0.77
GPNMB-201ENST00000258733 PSEN1P49768 467 aa10.2□□□□□ -0.78
GPNMB-201ENST00000258733 AXDND1Q5T1B0 1012 aaPredicted RBP10.2□□□□□ -0.78
GPNMB-201ENST00000258733 PPP4R3BQ5MIZ7 849 aa10.2□□□□□ -0.78
GPNMB-201ENST00000258733 NPM1P06748 294 aaKnown RBP eCLIP10.19□□□□□ -0.78
GPNMB-201ENST00000258733 CWC22Q9HCG8 908 aaKnown RBP10.18□□□□□ -0.78
GPNMB-201ENST00000258733 ANP32AP39687 249 aaKnown RBP10.17□□□□□ -0.78
GPNMB-201ENST00000258733 SETQ01105 290 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-201ENST00000258733 UTP14CQ5TAP6 766 aaKnown RBP10.17□□□□□ -0.78
GPNMB-201ENST00000258733 E9PSI1 815 aa10.15□□□□□ -0.78
GPNMB-201ENST00000258733 ANAPC15P60006 121 aa10.15□□□□□ -0.79
GPNMB-201ENST00000258733 DNAJC2Q99543 621 aaKnown RBP10.15□□□□□ -0.79
GPNMB-201ENST00000258733 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.79
GPNMB-201ENST00000258733 DNTTIP2Q5QJE6 756 aaKnown RBP10.13□□□□□ -0.79
GPNMB-201ENST00000258733 DCAF11Q8TEB1 546 aa10.13□□□□□ -0.79
GPNMB-201ENST00000258733 GPATCH11Q8N954 259 aa10.13□□□□□ -0.79
GPNMB-201ENST00000258733 FRAT1Q92837 279 aaPredicted RBP10.13□□□□□ -0.79
GPNMB-201ENST00000258733 CC2D2BQ6DHV5 1058 aa10.12□□□□□ -0.79
GPNMB-201ENST00000258733 TPM2P07951 284 aa10.11□□□□□ -0.79
GPNMB-201ENST00000258733 CLCN1P35523 988 aa10.11□□□□□ -0.79
GPNMB-201ENST00000258733 CC2D1BQ5T0F9 858 aaKnown RBP10.11□□□□□ -0.79
GPNMB-201ENST00000258733 NGEFQ8N5V2 710 aa10.11□□□□□ -0.79
GPNMB-201ENST00000258733 DMTNQ08495 405 aa10.1□□□□□ -0.79
GPNMB-201ENST00000258733 TNNT2P45379 298 aaPredicted RBP10.09□□□□□ -0.79
GPNMB-201ENST00000258733 CARD10Q9BWT7 1032 aa10.09□□□□□ -0.79
GPNMB-201ENST00000258733 LAS1LQ9Y4W2 734 aaKnown RBP10.08□□□□□ -0.8
GPNMB-201ENST00000258733 EGFL6Q8IUX8 553 aa10.08□□□□□ -0.8
GPNMB-201ENST00000258733 P3H3Q8IVL6 736 aa10.08□□□□□ -0.8
GPNMB-201ENST00000258733 MAP7D2Q96T17 732 aa10.07□□□□□ -0.8
GPNMB-201ENST00000258733 KIF20AO95235 890 aa10.07□□□□□ -0.8
GPNMB-201ENST00000258733 SH3BP1Q9Y3L3 701 aa10.07□□□□□ -0.8
GPNMB-201ENST00000258733 MAFGO15525 162 aa10.05□□□□□ -0.8
GPNMB-201ENST00000258733 CDCA8Q53HL2 280 aa10.05□□□□□ -0.8
GPNMB-201ENST00000258733 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
GPNMB-201ENST00000258733 TAF3Q5VWG9 929 aa10.05□□□□□ -0.8
GPNMB-201ENST00000258733 AEBP1Q8IUX7 1158 aa10.04□□□□□ -0.8
GPNMB-201ENST00000258733 RALBP1Q15311 655 aa10.04□□□□□ -0.8
GPNMB-201ENST00000258733 NBPF20Q3BBV1 942 aa10.03□□□□□ -0.8
GPNMB-201ENST00000258733 ERCC6Q03468 1493 aa10.02□□□□□ -0.8
GPNMB-201ENST00000258733 TRIM44Q96DX7 344 aaPredicted RBP10.02□□□□□ -0.81
GPNMB-201ENST00000258733 IRF6O14896 467 aa10.01□□□□□ -0.81
GPNMB-201ENST00000258733 CEP120Q8N960 986 aa10.01□□□□□ -0.81
GPNMB-201ENST00000258733 SEMA3FQ13275 785 aa10.01□□□□□ -0.81
GPNMB-201ENST00000258733 MPNDQ8N594 471 aa10.01□□□□□ -0.81
GPNMB-201ENST00000258733 RSF1Q96T23 1441 aaPredicted RBP10.01□□□□□ -0.81
GPNMB-201ENST00000258733 TRHP20396 242 aaPredicted RBP10□□□□□ -0.81
GPNMB-201ENST00000258733 SLC20A2Q08357 652 aa10□□□□□ -0.81
GPNMB-201ENST00000258733 ZBTB22O15209 634 aa9.99□□□□□ -0.81
GPNMB-201ENST00000258733 FAM9BQ8IZU0 186 aa9.99□□□□□ -0.81
GPNMB-201ENST00000258733 CHMP4CQ96CF2 233 aa9.99□□□□□ -0.81
GPNMB-201ENST00000258733 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
GPNMB-201ENST00000258733 GEMIN8Q9NWZ8 242 aaKnown RBP9.99□□□□□ -0.81
GPNMB-201ENST00000258733 PLEKHD1A6NEE1 506 aa9.98□□□□□ -0.81
GPNMB-201ENST00000258733 ZSCAN20P17040 1043 aaPredicted RBP9.98□□□□□ -0.81
GPNMB-201ENST00000258733 CCDC27Q2M243 656 aa9.98□□□□□ -0.81
GPNMB-201ENST00000258733 YY1AP1Q9H869 796 aa9.98□□□□□ -0.81
GPNMB-201ENST00000258733 LETM1O95202 739 aaPredicted RBP9.98□□□□□ -0.81
GPNMB-201ENST00000258733 FAM50AQ14320 339 aaKnown RBP9.98□□□□□ -0.81
GPNMB-201ENST00000258733 NBPF1Q3BBV0 1214 aa9.97□□□□□ -0.81
GPNMB-201ENST00000258733 NBPF11Q86T75 865 aa9.97□□□□□ -0.81
GPNMB-201ENST00000258733 TCERG1O14776 1098 aaKnown RBP9.96□□□□□ -0.81
GPNMB-201ENST00000258733 NECTIN2Q92692 538 aa9.96□□□□□ -0.81
GPNMB-201ENST00000258733 GTPBP4Q9BZE4 634 aaKnown RBP9.96□□□□□ -0.81
GPNMB-201ENST00000258733 THOC2Q8NI27 1593 aaKnown RBP9.96□□□□□ -0.81
GPNMB-201ENST00000258733 FBLN2P98095 1184 aa9.96□□□□□ -0.81
GPNMB-201ENST00000258733 ZNF428Q96B54 188 aa9.96□□□□□ -0.81
GPNMB-201ENST00000258733 SCRIBQ14160 1630 aa9.96□□□□□ -0.82
GPNMB-201ENST00000258733 TTC36A6NLP5 189 aa9.96□□□□□ -0.82
GPNMB-201ENST00000258733 HSP90AB3PQ58FF7 597 aa9.95□□□□□ -0.82
GPNMB-201ENST00000258733 NFKBIBQ15653 356 aa9.94□□□□□ -0.82
GPNMB-201ENST00000258733 BAZ1BQ9UIG0 1483 aaKnown RBP9.94□□□□□ -0.82
GPNMB-201ENST00000258733 PPP4R2Q9NY27 417 aa9.93□□□□□ -0.82
GPNMB-201ENST00000258733 EP400NLQ6ZTU2 488 aa9.93□□□□□ -0.82
GPNMB-201ENST00000258733 MTERF4Q7Z6M4 381 aaKnown RBP9.93□□□□□ -0.82
GPNMB-201ENST00000258733 TMTC2Q8N394 836 aa9.93□□□□□ -0.82
GPNMB-201ENST00000258733 BANK1Q8NDB2 785 aa9.93□□□□□ -0.82
GPNMB-201ENST00000258733 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
GPNMB-201ENST00000258733 RGL3Q3MIN7 710 aa9.92□□□□□ -0.82
GPNMB-201ENST00000258733 FAM177A1Q8N128 213 aaPredicted RBP9.91□□□□□ -0.82
GPNMB-201ENST00000258733 ZNF500O60304 480 aaPredicted RBP9.9□□□□□ -0.82
GPNMB-201ENST00000258733 KDM4AO75164 1064 aa9.9□□□□□ -0.82
GPNMB-201ENST00000258733 L1TD1Q5T7N2 865 aaKnown RBP9.9□□□□□ -0.82
GPNMB-201ENST00000258733 CGNQ9P2M7 1197 aaKnown RBP9.9□□□□□ -0.82
GPNMB-201ENST00000258733 GOLGA6L3A6NEY3 463 aa9.89□□□□□ -0.83
GPNMB-201ENST00000258733 KCNH8Q96L42 1107 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms