RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 TROQ12816 1431 aaPredicted RBP30.56■■■□□ 2.48
PAX3-201ENST00000258387 POGZQ7Z3K3 1410 aa30.55■■■□□ 2.48
PAX3-201ENST00000258387 ZMYM4Q5VZL5 1548 aa30.54■■■□□ 2.48
PAX3-201ENST00000258387 MAGI2Q86UL8 1455 aa30.54■■■□□ 2.48
PAX3-201ENST00000258387 CLIP1P30622 1438 aa30.52■■■□□ 2.48
PAX3-201ENST00000258387 KIF14Q15058 1648 aa30.51■■■□□ 2.47
PAX3-201ENST00000258387 MYT1LQ9UL68 1186 aa30.5■■■□□ 2.47
PAX3-201ENST00000258387 AFAP1Q8N556 730 aa30.49■■■□□ 2.47
PAX3-201ENST00000258387 RIMS1Q86UR5 1692 aaKnown RBP30.46■■■□□ 2.47
PAX3-201ENST00000258387 ARHGAP5Q13017 1502 aa30.46■■■□□ 2.47
PAX3-201ENST00000258387 MYO5CQ9NQX4 1742 aa30.44■■■□□ 2.46
PAX3-201ENST00000258387 CASKIN1Q8WXD9 1431 aa30.44■■■□□ 2.46
PAX3-201ENST00000258387 ATP10AO60312 1499 aa30.44■■■□□ 2.46
PAX3-201ENST00000258387 SIGLEC1Q9BZZ2 1709 aa30.42■■■□□ 2.46
PAX3-201ENST00000258387 HSPA2P54652 639 aa30.41■■■□□ 2.46
PAX3-201ENST00000258387 LMTK3Q96Q04 1460 aa30.4■■■□□ 2.46
PAX3-201ENST00000258387 PCF11O94913 1555 aaKnown RBP30.4■■■□□ 2.46
PAX3-201ENST00000258387 LRRIQ1Q96JM4 1722 aa30.39■■■□□ 2.46
PAX3-201ENST00000258387 C9orf84Q5VXU9 1444 aa30.38■■■□□ 2.45
PAX3-201ENST00000258387 ZNF518AQ6AHZ1 1483 aa30.37■■■□□ 2.45
PAX3-201ENST00000258387 CCDC18Q5T9S5 1454 aa30.36■■■□□ 2.45
PAX3-201ENST00000258387 CEBPAP49715 358 aaPredicted RBP30.32■■■□□ 2.44
PAX3-201ENST00000258387 ZNF777Q9ULD5 760 aaPredicted RBP30.3■■■□□ 2.44
PAX3-201ENST00000258387 TRAPPC8Q9Y2L5 1435 aa30.28■■■□□ 2.44
PAX3-201ENST00000258387 FBXO41Q8TF61 875 aa30.27■■■□□ 2.44
PAX3-201ENST00000258387 FYCO1Q9BQS8 1478 aa30.26■■■□□ 2.44
PAX3-201ENST00000258387 ARHGEF12Q9NZN5 1544 aa30.26■■■□□ 2.43
PAX3-201ENST00000258387 CDC42BPBQ9Y5S2 1711 aa30.25■■■□□ 2.43
PAX3-201ENST00000258387 KDM5CP41229 1560 aa30.25■■■□□ 2.43
PAX3-201ENST00000258387 FER1L4A9Z1Z3 1794 aa30.23■■■□□ 2.43
PAX3-201ENST00000258387 MLH3Q9UHC1 1453 aa30.21■■■□□ 2.43
PAX3-201ENST00000258387 PREX2Q70Z35 1606 aa30.2■■■□□ 2.43
PAX3-201ENST00000258387 ABCC1P33527 1531 aa30.18■■■□□ 2.42
PAX3-201ENST00000258387 HNRNPMP52272 730 aaKnown RBP eCLIP30.18■■■□□ 2.42
PAX3-201ENST00000258387 DIP2CQ9Y2E4 1556 aa30.18■■■□□ 2.42
PAX3-201ENST00000258387 ESF1Q9H501 851 aaKnown RBP30.17■■■□□ 2.42
PAX3-201ENST00000258387 GPATCH8Q9UKJ3 1502 aaKnown RBP30.14■■■□□ 2.42
PAX3-201ENST00000258387 CFDP1Q9UEE9 299 aaPredicted RBP30.14■■■□□ 2.42
PAX3-201ENST00000258387 ABCA6Q8N139 1617 aa30.11■■■□□ 2.41
PAX3-201ENST00000258387 CDC42BPAQ5VT25 1732 aa30.1■■■□□ 2.41
PAX3-201ENST00000258387 SPAG9O60271 1321 aaKnown RBP30.1■■■□□ 2.41
PAX3-201ENST00000258387 MTUS2Q5JR59 1369 aa30.09■■■□□ 2.41
PAX3-201ENST00000258387 CCNB3Q8WWL7 1395 aa30.09■■■□□ 2.41
PAX3-201ENST00000258387 ITSN2Q9NZM3 1697 aa30.09■■■□□ 2.41
PAX3-201ENST00000258387 REREQ9P2R6 1566 aa30.07■■■□□ 2.4
PAX3-201ENST00000258387 SAMD9LQ8IVG5 1584 aa30.04■■■□□ 2.4
PAX3-201ENST00000258387 AGLP35573 1532 aa30.04■■■□□ 2.4
PAX3-201ENST00000258387 SYCP2Q9BX26 1530 aa30.03■■■□□ 2.4
PAX3-201ENST00000258387 KIDINS220Q9ULH0 1771 aa30.03■■■□□ 2.4
PAX3-201ENST00000258387 UHRF1BP1Q6BDS2 1440 aa30.02■■■□□ 2.4
PAX3-201ENST00000258387 CERKQ8TCT0 537 aa30■■■□□ 2.39
PAX3-201ENST00000258387 ZNF644Q9H582 1327 aaPredicted RBP29.99■■■□□ 2.39
PAX3-201ENST00000258387 KIAA1107Q9UPP5 1409 aa29.99■■■□□ 2.39
PAX3-201ENST00000258387 PREX1Q8TCU6 1659 aa29.98■■■□□ 2.39
PAX3-201ENST00000258387 CEP162Q5TB80 1403 aa29.96■■■□□ 2.39
PAX3-201ENST00000258387 PLEKHH2Q8IVE3 1493 aa29.96■■■□□ 2.39
PAX3-201ENST00000258387 DMRT2Q9Y5R5 561 aa29.96■■■□□ 2.39
PAX3-201ENST00000258387 CNTLNQ9NXG0 1405 aa29.92■■■□□ 2.38
PAX3-201ENST00000258387 GGT6Q6P531 493 aa29.91■■■□□ 2.38
PAX3-201ENST00000258387 SETD1BQ9UPS6 1966 aaKnown RBP29.91■■■□□ 2.38
PAX3-201ENST00000258387 C3P01024 1663 aa29.91■■■□□ 2.38
PAX3-201ENST00000258387 ATP7AQ04656 1500 aa29.89■■■□□ 2.38
PAX3-201ENST00000258387 ZMYM3Q14202 1370 aa29.89■■■□□ 2.37
PAX3-201ENST00000258387 LOC105371045A0A1W2PR82 267 aa29.88■■■□□ 2.37
PAX3-201ENST00000258387 A2MP01023 1474 aa29.87■■■□□ 2.37
PAX3-201ENST00000258387 EHBP1L1Q8N3D4 1523 aa29.85■■■□□ 2.37
PAX3-201ENST00000258387 SUPT6HQ7KZ85 1726 aaKnown RBP29.84■■■□□ 2.37
PAX3-201ENST00000258387 TIAM1Q13009 1591 aa29.83■■■□□ 2.37
PAX3-201ENST00000258387 STRCQ7RTU9 1775 aa29.82■■■□□ 2.36
PAX3-201ENST00000258387 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
PAX3-201ENST00000258387 INO80Q9ULG1 1556 aaPredicted RBP29.8■■■□□ 2.36
PAX3-201ENST00000258387 NPATQ14207 1427 aa29.77■■■□□ 2.36
PAX3-201ENST00000258387 PTPRTO14522 1441 aa29.75■■■□□ 2.35
PAX3-201ENST00000258387 PLXNC1O60486 1568 aa29.75■■■□□ 2.35
PAX3-201ENST00000258387 NCOA2Q15596 1464 aa29.74■■■□□ 2.35
PAX3-201ENST00000258387 PPP6R1Q9UPN7 881 aa29.73■■■□□ 2.35
PAX3-201ENST00000258387 RTEL1-TNFRSF6BF6WH68 1400 aa29.71■■■□□ 2.35
PAX3-201ENST00000258387 DHX29Q7Z478 1369 aaKnown RBP29.71■■■□□ 2.35
PAX3-201ENST00000258387 NCOA1Q15788 1441 aa29.71■■■□□ 2.35
PAX3-201ENST00000258387 NCKAP5LQ9HCH0 1330 aa29.71■■■□□ 2.35
PAX3-201ENST00000258387 CLTCQ00610 1675 aaKnown RBP29.7■■■□□ 2.35
PAX3-201ENST00000258387 KIF3BO15066 747 aa29.7■■■□□ 2.35
PAX3-201ENST00000258387 MROH2AA6NES4 1674 aa29.69■■■□□ 2.34
PAX3-201ENST00000258387 RSPH4AQ5TD94 716 aa29.69■■■□□ 2.34
PAX3-201ENST00000258387 PTPRKQ15262 1439 aa29.68■■■□□ 2.34
PAX3-201ENST00000258387 CAMSAP2Q08AD1 1489 aa29.66■■■□□ 2.34
PAX3-201ENST00000258387 CAMSAP1Q5T5Y3 1602 aa29.65■■■□□ 2.34
PAX3-201ENST00000258387 TSPY4P0CV99 314 aa29.65■■■□□ 2.34
PAX3-201ENST00000258387 TSPY10P0CW01 314 aa29.65■■■□□ 2.34
PAX3-201ENST00000258387 CCDC141Q6ZP82 1450 aa29.65■■■□□ 2.34
PAX3-201ENST00000258387 ADGBQ8N7X0 1667 aa29.65■■■□□ 2.34
PAX3-201ENST00000258387 VPS8Q8N3P4 1428 aa29.63■■■□□ 2.33
PAX3-201ENST00000258387 KANK4Q5T7N3 995 aaPredicted RBP29.62■■■□□ 2.33
PAX3-201ENST00000258387 FBXO31Q5XUX0 539 aaPredicted RBP29.6■■■□□ 2.33
PAX3-201ENST00000258387 LRRC9Q6ZRR7 1453 aa29.59■■■□□ 2.33
PAX3-201ENST00000258387 WASHC2CQ9Y4E1 1318 aa29.58■■■□□ 2.33
PAX3-201ENST00000258387 PKD2Q13563 968 aa29.57■■■□□ 2.32
PAX3-201ENST00000258387 LTBP4Q8N2S1 1624 aa29.53■■■□□ 2.32
PAX3-201ENST00000258387 ZNF335Q9H4Z2 1342 aaPredicted RBP29.53■■■□□ 2.32
PAX3-201ENST00000258387 MYO3AQ8NEV4 1616 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms