RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
CCNA1-201ENST00000255465 CCDC18Q5T9S5 1454 aa16.91■□□□□ 0.3
CCNA1-201ENST00000255465 ABCA9Q8IUA7 1624 aa16.9■□□□□ 0.3
CCNA1-201ENST00000255465 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
CCNA1-201ENST00000255465 FANCIQ9NVI1 1328 aa16.88■□□□□ 0.29
CCNA1-201ENST00000255465 CD109Q6YHK3 1445 aa16.87■□□□□ 0.29
CCNA1-201ENST00000255465 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
CCNA1-201ENST00000255465 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.84■□□□□ 0.29
CCNA1-201ENST00000255465 AEBP2Q6ZN18 517 aaPredicted RBP16.84■□□□□ 0.29
CCNA1-201ENST00000255465 MIER1Q8N108 512 aa16.84■□□□□ 0.29
CCNA1-201ENST00000255465 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
CCNA1-201ENST00000255465 TROQ12816 1431 aaPredicted RBP16.84■□□□□ 0.29
CCNA1-201ENST00000255465 MAGI3Q5TCQ9 1506 aa16.83■□□□□ 0.29
CCNA1-201ENST00000255465 TEX14Q8IWB6 1497 aa16.83■□□□□ 0.28
CCNA1-201ENST00000255465 TTC37Q6PGP7 1564 aa16.82■□□□□ 0.28
CCNA1-201ENST00000255465 KIF14Q15058 1648 aa16.82■□□□□ 0.28
CCNA1-201ENST00000255465 DEKP35659 375 aaKnown RBP16.8■□□□□ 0.28
CCNA1-201ENST00000255465 KDM6BO15054 1643 aa16.8■□□□□ 0.28
CCNA1-201ENST00000255465 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
CCNA1-201ENST00000255465 PKNOX2Q96KN3 472 aa16.77■□□□□ 0.27
CCNA1-201ENST00000255465 SALL2Q9Y467 1007 aaPredicted RBP16.76■□□□□ 0.27
CCNA1-201ENST00000255465 TIAM1Q13009 1591 aa16.76■□□□□ 0.27
CCNA1-201ENST00000255465 MTUS2Q5JR59 1369 aa16.74■□□□□ 0.27
CCNA1-201ENST00000255465 COL17A1Q9UMD9 1497 aaPredicted RBP16.73■□□□□ 0.27
CCNA1-201ENST00000255465 PLCH2O75038 1416 aa16.73■□□□□ 0.27
CCNA1-201ENST00000255465 EHBP1L1Q8N3D4 1523 aa16.72■□□□□ 0.27
CCNA1-201ENST00000255465 NEO1Q92859 1461 aa16.72■□□□□ 0.27
CCNA1-201ENST00000255465 CDC42BPAQ5VT25 1732 aa16.72■□□□□ 0.27
CCNA1-201ENST00000255465 CDC42BPBQ9Y5S2 1711 aa16.72■□□□□ 0.27
CCNA1-201ENST00000255465 MAP3K1Q13233 1512 aa16.71■□□□□ 0.27
CCNA1-201ENST00000255465 CFAP74Q9C0B2 1584 aa16.71■□□□□ 0.27
CCNA1-201ENST00000255465 FANCAO15360 1455 aa16.71■□□□□ 0.26
CCNA1-201ENST00000255465 ARAP3Q8WWN8 1544 aa16.7■□□□□ 0.26
CCNA1-201ENST00000255465 PHLDB1Q86UU1 1377 aa16.7■□□□□ 0.26
CCNA1-201ENST00000255465 PREX2Q70Z35 1606 aa16.69■□□□□ 0.26
CCNA1-201ENST00000255465 MSH5O43196 834 aa16.68■□□□□ 0.26
CCNA1-201ENST00000255465 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
CCNA1-201ENST00000255465 AKNAQ7Z591 1439 aa16.67■□□□□ 0.26
CCNA1-201ENST00000255465 LRRC9Q6ZRR7 1453 aa16.67■□□□□ 0.26
CCNA1-201ENST00000255465 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
CCNA1-201ENST00000255465 KANK4Q5T7N3 995 aaPredicted RBP16.65■□□□□ 0.26
CCNA1-201ENST00000255465 EFCAB2Q5VUJ9 269 aa16.65■□□□□ 0.26
CCNA1-201ENST00000255465 GPATCH8Q9UKJ3 1502 aaKnown RBP16.64■□□□□ 0.25
CCNA1-201ENST00000255465 RICTORQ6R327 1708 aa16.63■□□□□ 0.25
CCNA1-201ENST00000255465 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
CCNA1-201ENST00000255465 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
CCNA1-201ENST00000255465 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
CCNA1-201ENST00000255465 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
CCNA1-201ENST00000255465 FRMPD1Q5SYB0 1578 aa16.61■□□□□ 0.25
CCNA1-201ENST00000255465 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
CCNA1-201ENST00000255465 DENND4BO75064 1496 aaPredicted RBP16.6■□□□□ 0.25
CCNA1-201ENST00000255465 PODXL2Q9NZ53 605 aa16.59■□□□□ 0.25
CCNA1-201ENST00000255465 SCAPERQ9BY12 1400 aa16.59■□□□□ 0.25
CCNA1-201ENST00000255465 SAMD9LQ8IVG5 1584 aa16.57■□□□□ 0.24
CCNA1-201ENST00000255465 CFDP1Q9UEE9 299 aaPredicted RBP16.57■□□□□ 0.24
CCNA1-201ENST00000255465 ABCC1P33527 1531 aa16.56■□□□□ 0.24
CCNA1-201ENST00000255465 ZNF777Q9ULD5 760 aaPredicted RBP16.56■□□□□ 0.24
CCNA1-201ENST00000255465 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
CCNA1-201ENST00000255465 ARHGEF12Q9NZN5 1544 aa16.54■□□□□ 0.24
CCNA1-201ENST00000255465 ZMYM4Q5VZL5 1548 aa16.53■□□□□ 0.24
CCNA1-201ENST00000255465 ZNF518AQ6AHZ1 1483 aa16.51■□□□□ 0.23
CCNA1-201ENST00000255465 SYCP2Q9BX26 1530 aa16.51■□□□□ 0.23
CCNA1-201ENST00000255465 PLEKHH2Q8IVE3 1493 aa16.51■□□□□ 0.23
CCNA1-201ENST00000255465 GLIPR1L2Q4G1C9 344 aa16.5■□□□□ 0.23
CCNA1-201ENST00000255465 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
CCNA1-201ENST00000255465 TRAPPC8Q9Y2L5 1435 aa16.5■□□□□ 0.23
CCNA1-201ENST00000255465 KDM5CP41229 1560 aa16.5■□□□□ 0.23
CCNA1-201ENST00000255465 AFAP1Q8N556 730 aa16.5■□□□□ 0.23
CCNA1-201ENST00000255465 HNRNPMP52272 730 aaKnown RBP eCLIP16.49■□□□□ 0.23
CCNA1-201ENST00000255465 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
CCNA1-201ENST00000255465 MYOM3Q5VTT5 1437 aa16.49■□□□□ 0.23
CCNA1-201ENST00000255465 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
CCNA1-201ENST00000255465 MAGI2Q86UL8 1455 aa16.48■□□□□ 0.23
CCNA1-201ENST00000255465 ARHGEF40Q8TER5 1519 aa16.47■□□□□ 0.23
CCNA1-201ENST00000255465 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
CCNA1-201ENST00000255465 ZFYVE16Q7Z3T8 1539 aa16.46■□□□□ 0.23
CCNA1-201ENST00000255465 HECW2Q9P2P5 1572 aa16.46■□□□□ 0.23
CCNA1-201ENST00000255465 MIA2Q96PC5 1412 aa16.46■□□□□ 0.23
CCNA1-201ENST00000255465 YEATS2Q9ULM3 1422 aa16.45■□□□□ 0.22
CCNA1-201ENST00000255465 NEFLP07196 543 aa16.45■□□□□ 0.22
CCNA1-201ENST00000255465 KIDINS220Q9ULH0 1771 aa16.44■□□□□ 0.22
CCNA1-201ENST00000255465 MBD5Q9P267 1494 aa16.44■□□□□ 0.22
CCNA1-201ENST00000255465 MLH3Q9UHC1 1453 aa16.43■□□□□ 0.22
CCNA1-201ENST00000255465 PLEKHG5O94827 1062 aa16.42■□□□□ 0.22
CCNA1-201ENST00000255465 PTPN23Q9H3S7 1636 aa16.42■□□□□ 0.22
CCNA1-201ENST00000255465 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
CCNA1-201ENST00000255465 ABCA6Q8N139 1617 aa16.41■□□□□ 0.22
CCNA1-201ENST00000255465 ARHGEF5Q12774 1597 aa16.4■□□□□ 0.22
CCNA1-201ENST00000255465 SIGLEC1Q9BZZ2 1709 aa16.4■□□□□ 0.22
CCNA1-201ENST00000255465 DIP2CQ9Y2E4 1556 aa16.4■□□□□ 0.22
CCNA1-201ENST00000255465 C11orf95C9JLR9 678 aaPredicted RBP16.39■□□□□ 0.22
CCNA1-201ENST00000255465 ATP10AO60312 1499 aa16.39■□□□□ 0.21
CCNA1-201ENST00000255465 INO80Q9ULG1 1556 aaPredicted RBP16.39■□□□□ 0.21
CCNA1-201ENST00000255465 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
CCNA1-201ENST00000255465 CCDC141Q6ZP82 1450 aa16.39■□□□□ 0.21
CCNA1-201ENST00000255465 RSPH4AQ5TD94 716 aa16.38■□□□□ 0.21
CCNA1-201ENST00000255465 ATP7AQ04656 1500 aa16.38■□□□□ 0.21
CCNA1-201ENST00000255465 FKBP8Q14318 412 aa16.37■□□□□ 0.21
CCNA1-201ENST00000255465 TCOF1Q13428 1488 aaKnown RBP16.36■□□□□ 0.21
CCNA1-201ENST00000255465 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms