RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 ERICH6Q7L0X2 663 aa18.43■□□□□ 0.54
H3F3B-201ENST00000254810 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
H3F3B-201ENST00000254810 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
H3F3B-201ENST00000254810 CDK13Q14004 1512 aaKnown RBP18.41■□□□□ 0.54
H3F3B-201ENST00000254810 AKNAQ7Z591 1439 aa18.41■□□□□ 0.54
H3F3B-201ENST00000254810 TEX14Q8IWB6 1497 aa18.39■□□□□ 0.54
H3F3B-201ENST00000254810 ANKRD30BQ9BXX2 1392 aa18.39■□□□□ 0.53
H3F3B-201ENST00000254810 SPATA31E1Q6ZUB1 1445 aa18.39■□□□□ 0.53
H3F3B-201ENST00000254810 EPRSP07814 1512 aaKnown RBP18.38■□□□□ 0.53
H3F3B-201ENST00000254810 RPRD2Q5VT52 1461 aaKnown RBP18.37■□□□□ 0.53
H3F3B-201ENST00000254810 CNGB1Q14028 1251 aaPredicted RBP18.36■□□□□ 0.53
H3F3B-201ENST00000254810 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
H3F3B-201ENST00000254810 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
H3F3B-201ENST00000254810 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.52
H3F3B-201ENST00000254810 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
H3F3B-201ENST00000254810 PAK3O75914 559 aaPredicted RBP18.31■□□□□ 0.52
H3F3B-201ENST00000254810 DAPK1P53355 1430 aa18.3■□□□□ 0.52
H3F3B-201ENST00000254810 DHX29Q7Z478 1369 aaKnown RBP18.3■□□□□ 0.52
H3F3B-201ENST00000254810 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
H3F3B-201ENST00000254810 ABCC5O15440 1437 aa18.29■□□□□ 0.52
H3F3B-201ENST00000254810 WDR62O43379 1518 aa18.29■□□□□ 0.52
H3F3B-201ENST00000254810 SMG6Q86US8 1419 aaKnown RBP18.27■□□□□ 0.52
H3F3B-201ENST00000254810 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
H3F3B-201ENST00000254810 BCORL1Q5H9F3 1711 aa18.27■□□□□ 0.51
H3F3B-201ENST00000254810 DEKP35659 375 aaKnown RBP18.26■□□□□ 0.51
H3F3B-201ENST00000254810 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
H3F3B-201ENST00000254810 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
H3F3B-201ENST00000254810 IQGAP2Q13576 1575 aa18.25■□□□□ 0.51
H3F3B-201ENST00000254810 ROCK1Q13464 1354 aa18.25■□□□□ 0.51
H3F3B-201ENST00000254810 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
H3F3B-201ENST00000254810 NOP58Q9Y2X3 529 aaKnown RBP18.24■□□□□ 0.51
H3F3B-201ENST00000254810 DNMT1P26358 1616 aaKnown RBP18.23■□□□□ 0.51
H3F3B-201ENST00000254810 PZPP20742 1482 aa18.23■□□□□ 0.51
H3F3B-201ENST00000254810 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
H3F3B-201ENST00000254810 NBR1Q14596 966 aa18.22■□□□□ 0.51
H3F3B-201ENST00000254810 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
H3F3B-201ENST00000254810 MBD5Q9P267 1494 aa18.2■□□□□ 0.5
H3F3B-201ENST00000254810 ZNF326Q5BKZ1 582 aaKnown RBP18.2■□□□□ 0.5
H3F3B-201ENST00000254810 PBRM1Q86U86 1689 aa18.19■□□□□ 0.5
H3F3B-201ENST00000254810 USP47Q96K76 1375 aa18.19■□□□□ 0.5
H3F3B-201ENST00000254810 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
H3F3B-201ENST00000254810 ADAMTS12P58397 1594 aa18.16■□□□□ 0.5
H3F3B-201ENST00000254810 PNISRQ8TF01 805 aaKnown RBP18.15■□□□□ 0.5
H3F3B-201ENST00000254810 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.5
H3F3B-201ENST00000254810 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
H3F3B-201ENST00000254810 KDM5CP41229 1560 aa18.14■□□□□ 0.49
H3F3B-201ENST00000254810 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
H3F3B-201ENST00000254810 DISP1Q96F81 1524 aa18.1■□□□□ 0.49
H3F3B-201ENST00000254810 PKD2Q13563 968 aa18.1■□□□□ 0.49
H3F3B-201ENST00000254810 IPO9Q96P70 1041 aaKnown RBP18.1■□□□□ 0.49
H3F3B-201ENST00000254810 KIAA1107Q9UPP5 1409 aa18.1■□□□□ 0.49
H3F3B-201ENST00000254810 KIF14Q15058 1648 aa18.1■□□□□ 0.49
H3F3B-201ENST00000254810 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
H3F3B-201ENST00000254810 CAMSAP2Q08AD1 1489 aa18.09■□□□□ 0.49
H3F3B-201ENST00000254810 KIAA0556O60303 1618 aa18.07■□□□□ 0.48
H3F3B-201ENST00000254810 TMC1Q8TDI8 760 aa18.07■□□□□ 0.48
H3F3B-201ENST00000254810 ANP32AP39687 249 aaKnown RBP18.06■□□□□ 0.48
H3F3B-201ENST00000254810 ZNF777Q9ULD5 760 aaPredicted RBP18.05■□□□□ 0.48
H3F3B-201ENST00000254810 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
H3F3B-201ENST00000254810 RAPGEF6Q8TEU7 1601 aa18.04■□□□□ 0.48
H3F3B-201ENST00000254810 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-201ENST00000254810 EXOC6Q8TAG9 804 aa18.03■□□□□ 0.48
H3F3B-201ENST00000254810 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
H3F3B-201ENST00000254810 GPATCH8Q9UKJ3 1502 aaKnown RBP18.02■□□□□ 0.47
H3F3B-201ENST00000254810 ZNF608Q9ULD9 1512 aaPredicted RBP18.02■□□□□ 0.47
H3F3B-201ENST00000254810 RALGAPBQ86X10 1494 aa18.01■□□□□ 0.47
H3F3B-201ENST00000254810 CARD11Q9BXL7 1154 aa18.01■□□□□ 0.47
H3F3B-201ENST00000254810 ARID4BQ4LE39 1312 aaPredicted RBP18.01■□□□□ 0.47
H3F3B-201ENST00000254810 ST20-MTHFSA0A0A6YYL1 179 aa18.01■□□□□ 0.47
H3F3B-201ENST00000254810 ZBTB47Q9UFB7 747 aaPredicted RBP18.01■□□□□ 0.47
H3F3B-201ENST00000254810 SALL2Q9Y467 1007 aaPredicted RBP18.01■□□□□ 0.47
H3F3B-201ENST00000254810 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
H3F3B-201ENST00000254810 RRP1P56182 461 aaKnown RBP18■□□□□ 0.47
H3F3B-201ENST00000254810 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
H3F3B-201ENST00000254810 TROQ12816 1431 aaPredicted RBP17.99■□□□□ 0.47
H3F3B-201ENST00000254810 KIF15Q9NS87 1388 aa17.99■□□□□ 0.47
H3F3B-201ENST00000254810 KDM2AQ9Y2K7 1162 aa17.99■□□□□ 0.47
H3F3B-201ENST00000254810 CROCC2H7BZ55 1655 aa17.99■□□□□ 0.47
H3F3B-201ENST00000254810 NPM2Q86SE8 214 aaKnown RBP17.98■□□□□ 0.47
H3F3B-201ENST00000254810 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
H3F3B-201ENST00000254810 ROCK2O75116 1388 aaKnown RBP17.97■□□□□ 0.47
H3F3B-201ENST00000254810 MYBBP1AQ9BQG0 1328 aaKnown RBP17.97■□□□□ 0.47
H3F3B-201ENST00000254810 ANKRD50Q9ULJ7 1429 aa17.97■□□□□ 0.47
H3F3B-201ENST00000254810 PLB1Q6P1J6 1458 aa17.97■□□□□ 0.47
H3F3B-201ENST00000254810 BRD4O60885 1362 aaPredicted RBP17.96■□□□□ 0.47
H3F3B-201ENST00000254810 NUP155O75694 1391 aa17.95■□□□□ 0.46
H3F3B-201ENST00000254810 SKAP1Q86WV1 359 aa17.94■□□□□ 0.46
H3F3B-201ENST00000254810 E9PCH4 1651 aa17.94■□□□□ 0.46
H3F3B-201ENST00000254810 ANKRD30AQ9BXX3 1397 aa17.94■□□□□ 0.46
H3F3B-201ENST00000254810 RCAN3Q9UKA8 241 aa17.94■□□□□ 0.46
H3F3B-201ENST00000254810 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
H3F3B-201ENST00000254810 CDCA7LQ96GN5 454 aa17.93■□□□□ 0.46
H3F3B-201ENST00000254810 DCAF11Q8TEB1 546 aa17.92■□□□□ 0.46
H3F3B-201ENST00000254810 PDE4AP27815 886 aa17.92■□□□□ 0.46
H3F3B-201ENST00000254810 RALBP1Q15311 655 aa17.91■□□□□ 0.46
H3F3B-201ENST00000254810 RTL5Q5HYW3 569 aaPredicted RBP17.9■□□□□ 0.46
H3F3B-201ENST00000254810 ARHGEF12Q9NZN5 1544 aa17.9■□□□□ 0.46
H3F3B-201ENST00000254810 LAS1LQ9Y4W2 734 aaKnown RBP17.9■□□□□ 0.46
H3F3B-201ENST00000254810 PLIN1O60240 522 aa17.89■□□□□ 0.45
H3F3B-201ENST00000254810 ADCY10Q96PN6 1610 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms