RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
CLUHP3-201ENST00000254109 PREX2Q70Z35 1606 aa16.85■□□□□ 0.29
CLUHP3-201ENST00000254109 PTPN23Q9H3S7 1636 aa16.84■□□□□ 0.29
CLUHP3-201ENST00000254109 DIP2BQ9P265 1576 aa16.84■□□□□ 0.29
CLUHP3-201ENST00000254109 MIA2Q96PC5 1412 aa16.83■□□□□ 0.29
CLUHP3-201ENST00000254109 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.29
CLUHP3-201ENST00000254109 PLCH2O75038 1416 aa16.83■□□□□ 0.28
CLUHP3-201ENST00000254109 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
CLUHP3-201ENST00000254109 CD109Q6YHK3 1445 aa16.81■□□□□ 0.28
CLUHP3-201ENST00000254109 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
CLUHP3-201ENST00000254109 GLI2P10070 1586 aa16.81■□□□□ 0.28
CLUHP3-201ENST00000254109 ITGAEP38570 1179 aa16.8■□□□□ 0.28
CLUHP3-201ENST00000254109 TCOF1Q13428 1488 aaKnown RBP16.79■□□□□ 0.28
CLUHP3-201ENST00000254109 MAP3K4Q9Y6R4 1608 aa16.79■□□□□ 0.28
CLUHP3-201ENST00000254109 CAMSAP2Q08AD1 1489 aa16.79■□□□□ 0.28
CLUHP3-201ENST00000254109 DHX57Q6P158 1386 aaKnown RBP16.78■□□□□ 0.28
CLUHP3-201ENST00000254109 TSPOAP1O95153 1857 aa16.77■□□□□ 0.28
CLUHP3-201ENST00000254109 SAMD9LQ8IVG5 1584 aa16.77■□□□□ 0.28
CLUHP3-201ENST00000254109 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.27
CLUHP3-201ENST00000254109 FANCAO15360 1455 aa16.76■□□□□ 0.27
CLUHP3-201ENST00000254109 ZNF316A6NFI3 1004 aaPredicted RBP16.75■□□□□ 0.27
CLUHP3-201ENST00000254109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLUHP3-201ENST00000254109 ARAP3Q8WWN8 1544 aa16.75■□□□□ 0.27
CLUHP3-201ENST00000254109 HNRNPMP52272 730 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLUHP3-201ENST00000254109 TRHP20396 242 aaPredicted RBP16.74■□□□□ 0.27
CLUHP3-201ENST00000254109 DIEXFQ68CQ4 756 aaKnown RBP16.74■□□□□ 0.27
CLUHP3-201ENST00000254109 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
CLUHP3-201ENST00000254109 ARHGEF12Q9NZN5 1544 aa16.72■□□□□ 0.27
CLUHP3-201ENST00000254109 SYCP2Q9BX26 1530 aa16.71■□□□□ 0.27
CLUHP3-201ENST00000254109 PTPRKQ15262 1439 aa16.71■□□□□ 0.27
CLUHP3-201ENST00000254109 AKNAQ7Z591 1439 aa16.7■□□□□ 0.26
CLUHP3-201ENST00000254109 ABCC5O15440 1437 aa16.7■□□□□ 0.26
CLUHP3-201ENST00000254109 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
CLUHP3-201ENST00000254109 ABCC1P33527 1531 aa16.69■□□□□ 0.26
CLUHP3-201ENST00000254109 DNMT1P26358 1616 aaKnown RBP16.69■□□□□ 0.26
CLUHP3-201ENST00000254109 DAPK1P53355 1430 aa16.68■□□□□ 0.26
CLUHP3-201ENST00000254109 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
CLUHP3-201ENST00000254109 CHIC2Q9UKJ5 165 aa16.68■□□□□ 0.26
CLUHP3-201ENST00000254109 RAB3GAP2Q9H2M9 1393 aa16.68■□□□□ 0.26
CLUHP3-201ENST00000254109 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
CLUHP3-201ENST00000254109 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
CLUHP3-201ENST00000254109 KIAA1107Q9UPP5 1409 aa16.67■□□□□ 0.26
CLUHP3-201ENST00000254109 CFAP74Q9C0B2 1584 aa16.67■□□□□ 0.26
CLUHP3-201ENST00000254109 SCAPERQ9BY12 1400 aa16.66■□□□□ 0.26
CLUHP3-201ENST00000254109 TRAPPC8Q9Y2L5 1435 aa16.66■□□□□ 0.26
CLUHP3-201ENST00000254109 NEO1Q92859 1461 aa16.65■□□□□ 0.26
CLUHP3-201ENST00000254109 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
CLUHP3-201ENST00000254109 ARHGEF5Q12774 1597 aa16.64■□□□□ 0.26
CLUHP3-201ENST00000254109 CROCC2H7BZ55 1655 aa16.64■□□□□ 0.25
CLUHP3-201ENST00000254109 CCDC141Q6ZP82 1450 aa16.63■□□□□ 0.25
CLUHP3-201ENST00000254109 TEX14Q8IWB6 1497 aa16.63■□□□□ 0.25
CLUHP3-201ENST00000254109 TSPY4P0CV99 314 aa16.61■□□□□ 0.25
CLUHP3-201ENST00000254109 TSPY10P0CW01 314 aa16.61■□□□□ 0.25
CLUHP3-201ENST00000254109 RSPH4AQ5TD94 716 aa16.61■□□□□ 0.25
CLUHP3-201ENST00000254109 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
CLUHP3-201ENST00000254109 RAPGEF3O95398 923 aa16.6■□□□□ 0.25
CLUHP3-201ENST00000254109 C9orf84Q5VXU9 1444 aa16.6■□□□□ 0.25
CLUHP3-201ENST00000254109 DENND4BO75064 1496 aaPredicted RBP16.58■□□□□ 0.25
CLUHP3-201ENST00000254109 POGZQ7Z3K3 1410 aa16.57■□□□□ 0.24
CLUHP3-201ENST00000254109 SHANK2Q9UPX8 1470 aa16.57■□□□□ 0.24
CLUHP3-201ENST00000254109 ADGBQ8N7X0 1667 aa16.56■□□□□ 0.24
CLUHP3-201ENST00000254109 ZNF518AQ6AHZ1 1483 aa16.56■□□□□ 0.24
CLUHP3-201ENST00000254109 COL17A1Q9UMD9 1497 aaPredicted RBP16.56■□□□□ 0.24
CLUHP3-201ENST00000254109 SPAG9O60271 1321 aaKnown RBP16.56■□□□□ 0.24
CLUHP3-201ENST00000254109 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
CLUHP3-201ENST00000254109 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
CLUHP3-201ENST00000254109 NCOA1Q15788 1441 aa16.55■□□□□ 0.24
CLUHP3-201ENST00000254109 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
CLUHP3-201ENST00000254109 MAST1Q9Y2H9 1570 aa16.54■□□□□ 0.24
CLUHP3-201ENST00000254109 ADGRL2O95490 1459 aa16.54■□□□□ 0.24
CLUHP3-201ENST00000254109 ANKRD30AQ9BXX3 1397 aa16.54■□□□□ 0.24
CLUHP3-201ENST00000254109 FRMPD1Q5SYB0 1578 aa16.54■□□□□ 0.24
CLUHP3-201ENST00000254109 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
CLUHP3-201ENST00000254109 NAIPQ13075 1403 aa16.53■□□□□ 0.24
CLUHP3-201ENST00000254109 KDM5CP41229 1560 aa16.53■□□□□ 0.24
CLUHP3-201ENST00000254109 ZFYVE16Q7Z3T8 1539 aa16.52■□□□□ 0.23
CLUHP3-201ENST00000254109 KIDINS220Q9ULH0 1771 aa16.51■□□□□ 0.23
CLUHP3-201ENST00000254109 INO80Q9ULG1 1556 aaPredicted RBP16.51■□□□□ 0.23
CLUHP3-201ENST00000254109 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
CLUHP3-201ENST00000254109 KDM6BO15054 1643 aa16.51■□□□□ 0.23
CLUHP3-201ENST00000254109 GCC2Q8IWJ2 1684 aa16.5■□□□□ 0.23
CLUHP3-201ENST00000254109 KIF15Q9NS87 1388 aa16.5■□□□□ 0.23
CLUHP3-201ENST00000254109 RTEL1-TNFRSF6BF6WH68 1400 aa16.5■□□□□ 0.23
CLUHP3-201ENST00000254109 HECW2Q9P2P5 1572 aa16.49■□□□□ 0.23
CLUHP3-201ENST00000254109 PLXNC1O60486 1568 aa16.48■□□□□ 0.23
CLUHP3-201ENST00000254109 MLH3Q9UHC1 1453 aa16.47■□□□□ 0.23
CLUHP3-201ENST00000254109 YEATS2Q9ULM3 1422 aa16.45■□□□□ 0.22
CLUHP3-201ENST00000254109 ZMYM4Q5VZL5 1548 aa16.45■□□□□ 0.22
CLUHP3-201ENST00000254109 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
CLUHP3-201ENST00000254109 ABCA6Q8N139 1617 aa16.44■□□□□ 0.22
CLUHP3-201ENST00000254109 TIMELESSQ9UNS1 1208 aa16.43■□□□□ 0.22
CLUHP3-201ENST00000254109 DUOX2Q9NRD8 1548 aa16.42■□□□□ 0.22
CLUHP3-201ENST00000254109 DIP2CQ9Y2E4 1556 aa16.41■□□□□ 0.22
CLUHP3-201ENST00000254109 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
CLUHP3-201ENST00000254109 NEUROD1Q13562 356 aa16.4■□□□□ 0.22
CLUHP3-201ENST00000254109 DHX29Q7Z478 1369 aaKnown RBP16.4■□□□□ 0.22
CLUHP3-201ENST00000254109 A2MP01023 1474 aa16.4■□□□□ 0.22
CLUHP3-201ENST00000254109 MAGI2Q86UL8 1455 aa16.39■□□□□ 0.21
CLUHP3-201ENST00000254109 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
CLUHP3-201ENST00000254109 SIN3AQ96ST3 1273 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms