RNA–Protein interactions for RNA: ENST00000252826.9

TRPM4-201, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPM4, Length 4,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-201ENST00000252826 FOXD1Q16676 465 aa18.58■□□□□ 0.56
TRPM4-201ENST00000252826 ARXQ96QS3 562 aa18.57■□□□□ 0.56
TRPM4-201ENST00000252826 EPRSP07814 1512 aaKnown RBP18.57■□□□□ 0.56
TRPM4-201ENST00000252826 RBM19Q9Y4C8 960 aaKnown RBP18.57■□□□□ 0.56
TRPM4-201ENST00000252826 FGD6Q6ZV73 1430 aa18.56■□□□□ 0.56
TRPM4-201ENST00000252826 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
TRPM4-201ENST00000252826 CTTNBP2Q8WZ74 1663 aa18.55■□□□□ 0.56
TRPM4-201ENST00000252826 ESF1Q9H501 851 aaKnown RBP18.54■□□□□ 0.56
TRPM4-201ENST00000252826 KDM2AQ9Y2K7 1162 aa18.54■□□□□ 0.56
TRPM4-201ENST00000252826 UACAQ9BZF9 1416 aa18.54■□□□□ 0.56
TRPM4-201ENST00000252826 GLIPR1L2Q4G1C9 344 aa18.51■□□□□ 0.55
TRPM4-201ENST00000252826 NUP160Q12769 1436 aa18.51■□□□□ 0.55
TRPM4-201ENST00000252826 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
TRPM4-201ENST00000252826 HIRIP3Q9BW71 556 aaPredicted RBP18.51■□□□□ 0.55
TRPM4-201ENST00000252826 HECW1Q76N89 1606 aa18.51■□□□□ 0.55
TRPM4-201ENST00000252826 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
TRPM4-201ENST00000252826 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
TRPM4-201ENST00000252826 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
TRPM4-201ENST00000252826 FAM69CQ0P6D2 419 aa18.48■□□□□ 0.55
TRPM4-201ENST00000252826 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
TRPM4-201ENST00000252826 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
TRPM4-201ENST00000252826 UGGT2Q9NYU1 1516 aa18.46■□□□□ 0.55
TRPM4-201ENST00000252826 ARID4BQ4LE39 1312 aaPredicted RBP18.46■□□□□ 0.55
TRPM4-201ENST00000252826 ANKRD30AQ9BXX3 1397 aa18.46■□□□□ 0.55
TRPM4-201ENST00000252826 GGT6Q6P531 493 aa18.46■□□□□ 0.55
TRPM4-201ENST00000252826 SPAG9O60271 1321 aaKnown RBP18.46■□□□□ 0.54
TRPM4-201ENST00000252826 MLECQ14165 292 aa18.45■□□□□ 0.54
TRPM4-201ENST00000252826 DISP1Q96F81 1524 aa18.45■□□□□ 0.54
TRPM4-201ENST00000252826 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
TRPM4-201ENST00000252826 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
TRPM4-201ENST00000252826 PKD2Q13563 968 aa18.42■□□□□ 0.54
TRPM4-201ENST00000252826 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
TRPM4-201ENST00000252826 MPHOSPH9Q99550 1183 aa18.42■□□□□ 0.54
TRPM4-201ENST00000252826 KIAA0556O60303 1618 aa18.42■□□□□ 0.54
TRPM4-201ENST00000252826 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
TRPM4-201ENST00000252826 NUP155O75694 1391 aa18.41■□□□□ 0.54
TRPM4-201ENST00000252826 KIF3BO15066 747 aa18.4■□□□□ 0.54
TRPM4-201ENST00000252826 NUP153P49790 1475 aaKnown RBP18.4■□□□□ 0.54
TRPM4-201ENST00000252826 RSPH4AQ5TD94 716 aa18.4■□□□□ 0.54
TRPM4-201ENST00000252826 ZBTB47Q9UFB7 747 aaPredicted RBP18.4■□□□□ 0.54
TRPM4-201ENST00000252826 SALL2Q9Y467 1007 aaPredicted RBP18.4■□□□□ 0.54
TRPM4-201ENST00000252826 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
TRPM4-201ENST00000252826 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
TRPM4-201ENST00000252826 ATP10BO94823 1461 aa18.37■□□□□ 0.53
TRPM4-201ENST00000252826 DHX57Q6P158 1386 aaKnown RBP18.36■□□□□ 0.53
TRPM4-201ENST00000252826 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
TRPM4-201ENST00000252826 ARHGAP5Q13017 1502 aa18.35■□□□□ 0.53
TRPM4-201ENST00000252826 SUPT6HQ7KZ85 1726 aaKnown RBP18.34■□□□□ 0.53
TRPM4-201ENST00000252826 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
TRPM4-201ENST00000252826 MAP3K1Q13233 1512 aa18.33■□□□□ 0.53
TRPM4-201ENST00000252826 ANP32CO43423 234 aa18.33■□□□□ 0.52
TRPM4-201ENST00000252826 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.52
TRPM4-201ENST00000252826 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRPM4-201ENST00000252826 CHD1O14646 1710 aa18.3■□□□□ 0.52
TRPM4-201ENST00000252826 SAMD9Q5K651 1589 aa18.3■□□□□ 0.52
TRPM4-201ENST00000252826 MIA2Q96PC5 1412 aa18.29■□□□□ 0.52
TRPM4-201ENST00000252826 SENP3-EIF4A1A0A087X0R7 540 aa18.28■□□□□ 0.52
TRPM4-201ENST00000252826 KIF15Q9NS87 1388 aa18.28■□□□□ 0.52
TRPM4-201ENST00000252826 RAPGEF3O95398 923 aa18.26■□□□□ 0.51
TRPM4-201ENST00000252826 DCAF11Q8TEB1 546 aa18.25■□□□□ 0.51
TRPM4-201ENST00000252826 TIMELESSQ9UNS1 1208 aa18.25■□□□□ 0.51
TRPM4-201ENST00000252826 KANK1Q14678 1352 aa18.24■□□□□ 0.51
TRPM4-201ENST00000252826 NEFMP07197 916 aa18.24■□□□□ 0.51
TRPM4-201ENST00000252826 ANKRD50Q9ULJ7 1429 aa18.21■□□□□ 0.51
TRPM4-201ENST00000252826 DAPK1P53355 1430 aa18.21■□□□□ 0.51
TRPM4-201ENST00000252826 ERCC6L2Q5T890 1561 aa18.2■□□□□ 0.5
TRPM4-201ENST00000252826 SCAPERQ9BY12 1400 aa18.2■□□□□ 0.5
TRPM4-201ENST00000252826 WASHC2CQ9Y4E1 1318 aa18.19■□□□□ 0.5
TRPM4-201ENST00000252826 L3MBTL2Q969R5 705 aa18.19■□□□□ 0.5
TRPM4-201ENST00000252826 GPATCH8Q9UKJ3 1502 aaKnown RBP18.19■□□□□ 0.5
TRPM4-201ENST00000252826 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.58e-7■■■□□ 16.1
TRPM4-201ENST00000252826 C9orf84Q5VXU9 1444 aa18.19■□□□□ 0.5
TRPM4-201ENST00000252826 KIF14Q15058 1648 aa18.18■□□□□ 0.5
TRPM4-201ENST00000252826 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
TRPM4-201ENST00000252826 NOP58Q9Y2X3 529 aaKnown RBP18.17■□□□□ 0.5
TRPM4-201ENST00000252826 CAMSAP2Q08AD1 1489 aa18.17■□□□□ 0.5
TRPM4-201ENST00000252826 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
TRPM4-201ENST00000252826 CD109Q6YHK3 1445 aa18.17■□□□□ 0.5
TRPM4-201ENST00000252826 ABCC5O15440 1437 aa18.16■□□□□ 0.5
TRPM4-201ENST00000252826 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
TRPM4-201ENST00000252826 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.15■□□□□ 0.51e-7■■□□□ 12.3
TRPM4-201ENST00000252826 VSIG10Q8N0Z9 540 aa18.15■□□□□ 0.5
TRPM4-201ENST00000252826 CARD11Q9BXL7 1154 aa18.15■□□□□ 0.5
TRPM4-201ENST00000252826 NAIPQ13075 1403 aa18.14■□□□□ 0.5
TRPM4-201ENST00000252826 MAGI3Q5TCQ9 1506 aa18.14■□□□□ 0.5
TRPM4-201ENST00000252826 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.5
TRPM4-201ENST00000252826 HFM1A2PYH4 1435 aa18.14■□□□□ 0.49
TRPM4-201ENST00000252826 PPP1R15AO75807 674 aaPredicted RBP18.14■□□□□ 0.49
TRPM4-201ENST00000252826 CFAP43Q8NDM7 1665 aa18.13■□□□□ 0.49
TRPM4-201ENST00000252826 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
TRPM4-201ENST00000252826 IL27Q8NEV9 243 aa18.11■□□□□ 0.49
TRPM4-201ENST00000252826 NAP1L5Q96NT1 182 aaPredicted RBP18.1■□□□□ 0.49
TRPM4-201ENST00000252826 B4GALNT3Q6L9W6 998 aa18.1■□□□□ 0.49
TRPM4-201ENST00000252826 FAM9BQ8IZU0 186 aa18.09■□□□□ 0.49
TRPM4-201ENST00000252826 NUTM2DQ5VT03 806 aaPredicted RBP18.09■□□□□ 0.49
TRPM4-201ENST00000252826 A0A0U1RQG5 324 aaPredicted RBP18.08■□□□□ 0.49
TRPM4-201ENST00000252826 PLEKHH2Q8IVE3 1493 aa18.06■□□□□ 0.48
TRPM4-201ENST00000252826 WDR7Q9Y4E6 1490 aa18.06■□□□□ 0.48
TRPM4-201ENST00000252826 FANCAO15360 1455 aa18.06■□□□□ 0.48
TRPM4-201ENST00000252826 CCDC141Q6ZP82 1450 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms