RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TTC37Q6PGP7 1564 aa21.15■□□□□ 0.98
SDF2-201ENST00000247020 RAB3GAP2Q9H2M9 1393 aa21.15■□□□□ 0.98
SDF2-201ENST00000247020 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.97
SDF2-201ENST00000247020 DAPK1P53355 1430 aa21.14■□□□□ 0.97
SDF2-201ENST00000247020 WDR7Q9Y4E6 1490 aa21.12■□□□□ 0.97
SDF2-201ENST00000247020 ADGBQ8N7X0 1667 aa21.12■□□□□ 0.97
SDF2-201ENST00000247020 ARAP3Q8WWN8 1544 aa21.1■□□□□ 0.97
SDF2-201ENST00000247020 ARHGEF5Q12774 1597 aa21.1■□□□□ 0.97
SDF2-201ENST00000247020 ROCK1Q13464 1354 aa21.1■□□□□ 0.97
SDF2-201ENST00000247020 DHX57Q6P158 1386 aaKnown RBP21.09■□□□□ 0.97
SDF2-201ENST00000247020 ABCC5O15440 1437 aa21.08■□□□□ 0.97
SDF2-201ENST00000247020 NAIPQ13075 1403 aa21.08■□□□□ 0.96
SDF2-201ENST00000247020 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
SDF2-201ENST00000247020 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
SDF2-201ENST00000247020 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
SDF2-201ENST00000247020 SHANK2Q9UPX8 1470 aa21.07■□□□□ 0.96
SDF2-201ENST00000247020 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
SDF2-201ENST00000247020 ABCA9Q8IUA7 1624 aa21.06■□□□□ 0.96
SDF2-201ENST00000247020 ACIN1Q9UKV3 1341 aaKnown RBP21.06■□□□□ 0.96
SDF2-201ENST00000247020 ADGRL2O95490 1459 aa21.05■□□□□ 0.96
SDF2-201ENST00000247020 PLEKHH2Q8IVE3 1493 aa21.05■□□□□ 0.96
SDF2-201ENST00000247020 ARHGAP5Q13017 1502 aa21.04■□□□□ 0.96
SDF2-201ENST00000247020 PLCH2O75038 1416 aa21.03■□□□□ 0.96
SDF2-201ENST00000247020 ZNF644Q9H582 1327 aaPredicted RBP21.03■□□□□ 0.96
SDF2-201ENST00000247020 ASXL2Q76L83 1435 aa21.02■□□□□ 0.96
SDF2-201ENST00000247020 NPM1P06748 294 aaKnown RBP eCLIP21.02■□□□□ 0.95
SDF2-201ENST00000247020 RSPH4AQ5TD94 716 aa21■□□□□ 0.95
SDF2-201ENST00000247020 KIAA1107Q9UPP5 1409 aa21■□□□□ 0.95
SDF2-201ENST00000247020 MBD5Q9P267 1494 aa20.99■□□□□ 0.95
SDF2-201ENST00000247020 ZNF777Q9ULD5 760 aaPredicted RBP20.97■□□□□ 0.95
SDF2-201ENST00000247020 CCDC141Q6ZP82 1450 aa20.97■□□□□ 0.95
SDF2-201ENST00000247020 MAST1Q9Y2H9 1570 aa20.97■□□□□ 0.95
SDF2-201ENST00000247020 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
SDF2-201ENST00000247020 MAPKBP1O60336 1514 aa20.96■□□□□ 0.95
SDF2-201ENST00000247020 SYCP2Q9BX26 1530 aa20.94■□□□□ 0.94
SDF2-201ENST00000247020 NCOA1Q15788 1441 aa20.94■□□□□ 0.94
SDF2-201ENST00000247020 CHIC2Q9UKJ5 165 aa20.93■□□□□ 0.94
SDF2-201ENST00000247020 ABCC1P33527 1531 aa20.93■□□□□ 0.94
SDF2-201ENST00000247020 ANKRD30AQ9BXX3 1397 aa20.93■□□□□ 0.94
SDF2-201ENST00000247020 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
SDF2-201ENST00000247020 EFCAB2Q5VUJ9 269 aa20.92■□□□□ 0.94
SDF2-201ENST00000247020 RRP7BPQ9NSQ0 103 aa20.91■□□□□ 0.94
SDF2-201ENST00000247020 CFAP74Q9C0B2 1584 aa20.91■□□□□ 0.94
SDF2-201ENST00000247020 KDM6BO15054 1643 aa20.9■□□□□ 0.94
SDF2-201ENST00000247020 TSPY4P0CV99 314 aa20.89■□□□□ 0.93
SDF2-201ENST00000247020 TSPY10P0CW01 314 aa20.89■□□□□ 0.93
SDF2-201ENST00000247020 PLXNC1O60486 1568 aa20.88■□□□□ 0.93
SDF2-201ENST00000247020 FANCAO15360 1455 aa20.85■□□□□ 0.93
SDF2-201ENST00000247020 HNRNPMP52272 730 aaKnown RBP eCLIP20.85■□□□□ 0.93
SDF2-201ENST00000247020 GLI2P10070 1586 aa20.83■□□□□ 0.93
SDF2-201ENST00000247020 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.93
SDF2-201ENST00000247020 CYB5RLQ6IPT4 315 aa20.81■□□□□ 0.92
SDF2-201ENST00000247020 ANKRD50Q9ULJ7 1429 aa20.8■□□□□ 0.92
SDF2-201ENST00000247020 MAP3K4Q9Y6R4 1608 aa20.79■□□□□ 0.92
SDF2-201ENST00000247020 RTEL1-TNFRSF6BF6WH68 1400 aa20.78■□□□□ 0.92
SDF2-201ENST00000247020 CD109Q6YHK3 1445 aa20.78■□□□□ 0.92
SDF2-201ENST00000247020 KIF15Q9NS87 1388 aa20.78■□□□□ 0.92
SDF2-201ENST00000247020 KDM5DQ9BY66 1539 aa20.76■□□□□ 0.91
SDF2-201ENST00000247020 ADGRL1O94910 1474 aa20.76■□□□□ 0.91
SDF2-201ENST00000247020 DUOX2Q9NRD8 1548 aa20.75■□□□□ 0.91
SDF2-201ENST00000247020 INO80Q9ULG1 1556 aaPredicted RBP20.74■□□□□ 0.91
SDF2-201ENST00000247020 NEO1Q92859 1461 aa20.74■□□□□ 0.91
SDF2-201ENST00000247020 TIMELESSQ9UNS1 1208 aa20.74■□□□□ 0.91
SDF2-201ENST00000247020 TRAPPC8Q9Y2L5 1435 aa20.74■□□□□ 0.91
SDF2-201ENST00000247020 ZFYVE16Q7Z3T8 1539 aa20.73■□□□□ 0.91
SDF2-201ENST00000247020 DIP2BQ9P265 1576 aa20.72■□□□□ 0.91
SDF2-201ENST00000247020 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
SDF2-201ENST00000247020 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
SDF2-201ENST00000247020 UNC13BO14795 1591 aa20.71■□□□□ 0.91
SDF2-201ENST00000247020 ERBINQ96RT1 1412 aa20.7■□□□□ 0.9
SDF2-201ENST00000247020 SCAPERQ9BY12 1400 aa20.69■□□□□ 0.9
SDF2-201ENST00000247020 PZPP20742 1482 aa20.69■□□□□ 0.9
SDF2-201ENST00000247020 ATP7AQ04656 1500 aa20.69■□□□□ 0.9
SDF2-201ENST00000247020 ZNF518AQ6AHZ1 1483 aa20.68■□□□□ 0.9
SDF2-201ENST00000247020 MPHOSPH9Q99550 1183 aa20.68■□□□□ 0.9
SDF2-201ENST00000247020 KDM5CP41229 1560 aa20.68■□□□□ 0.9
SDF2-201ENST00000247020 SPAG9O60271 1321 aaKnown RBP20.66■□□□□ 0.9
SDF2-201ENST00000247020 EIF2AK4Q9P2K8 1649 aaKnown RBP20.64■□□□□ 0.89
SDF2-201ENST00000247020 MAGI2Q86UL8 1455 aa20.64■□□□□ 0.89
SDF2-201ENST00000247020 POGZQ7Z3K3 1410 aa20.64■□□□□ 0.89
SDF2-201ENST00000247020 KIDINS220Q9ULH0 1771 aa20.63■□□□□ 0.89
SDF2-201ENST00000247020 IQGAP3Q86VI3 1631 aa20.62■□□□□ 0.89
SDF2-201ENST00000247020 HECW2Q9P2P5 1572 aa20.6■□□□□ 0.89
SDF2-201ENST00000247020 AFAP1Q8N556 730 aa20.6■□□□□ 0.89
SDF2-201ENST00000247020 SLC4A1APQ9BWU0 796 aaKnown RBP20.6■□□□□ 0.89
SDF2-201ENST00000247020 MLH3Q9UHC1 1453 aa20.59■□□□□ 0.89
SDF2-201ENST00000247020 DEPDC5O75140 1603 aa20.59■□□□□ 0.89
SDF2-201ENST00000247020 PPRC1Q5VV67 1664 aaKnown RBP20.59■□□□□ 0.89
SDF2-201ENST00000247020 KIF13AQ9H1H9 1805 aa20.59■□□□□ 0.89
SDF2-201ENST00000247020 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
SDF2-201ENST00000247020 RICTORQ6R327 1708 aa20.58■□□□□ 0.89
SDF2-201ENST00000247020 NUP155O75694 1391 aa20.58■□□□□ 0.89
SDF2-201ENST00000247020 ANKRD30BQ9BXX2 1392 aa20.58■□□□□ 0.89
SDF2-201ENST00000247020 FAM135AQ9P2D6 1515 aa20.58■□□□□ 0.89
SDF2-201ENST00000247020 TEX14Q8IWB6 1497 aa20.57■□□□□ 0.88
SDF2-201ENST00000247020 TONSLQ96HA7 1378 aa20.55■□□□□ 0.88
SDF2-201ENST00000247020 RPRD2Q5VT52 1461 aaKnown RBP20.54■□□□□ 0.88
SDF2-201ENST00000247020 NEUROD1Q13562 356 aa20.54■□□□□ 0.88
SDF2-201ENST00000247020 BCORL1Q5H9F3 1711 aa20.54■□□□□ 0.88
SDF2-201ENST00000247020 FAM69CQ0P6D2 419 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms