RNA–Protein interactions for RNA: ENST00000242839.8

ATP7B-201, Transcript of ATPase copper transporting beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP7B, Length 6,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-201ENST00000242839 VPS53Q5VIR6 699 aa14.38□□□□□ -0.11
ATP7B-201ENST00000242839 G3V3G9 751 aa14.38□□□□□ -0.11
ATP7B-201ENST00000242839 DCAF8Q5TAQ9 597 aa14.38□□□□□ -0.11
ATP7B-201ENST00000242839 NOL8Q76FK4 1167 aaKnown RBP14.38□□□□□ -0.11
ATP7B-201ENST00000242839 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
ATP7B-201ENST00000242839 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
ATP7B-201ENST00000242839 KIAA1211Q6ZU35 1233 aa14.35□□□□□ -0.11
ATP7B-201ENST00000242839 MORC1Q86VD1 984 aa14.35□□□□□ -0.11
ATP7B-201ENST00000242839 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
ATP7B-201ENST00000242839 DCAF11Q8TEB1 546 aa14.33□□□□□ -0.11
ATP7B-201ENST00000242839 GORABQ5T7V8 394 aa14.33□□□□□ -0.12
ATP7B-201ENST00000242839 RASSF8Q8NHQ8 419 aa14.33□□□□□ -0.12
ATP7B-201ENST00000242839 CHMP4BQ9H444 224 aaKnown RBP14.33□□□□□ -0.12
ATP7B-201ENST00000242839 L1TD1Q5T7N2 865 aaKnown RBP14.32□□□□□ -0.12
ATP7B-201ENST00000242839 CLIP1P30622 1438 aa14.32□□□□□ -0.12
ATP7B-201ENST00000242839 TAF7LQ5H9L4 462 aa14.32□□□□□ -0.12
ATP7B-201ENST00000242839 ITPRIPQ8IWB1 547 aa14.31□□□□□ -0.12
ATP7B-201ENST00000242839 FOXD4L5Q5VV16 416 aaPredicted RBP14.31□□□□□ -0.12
ATP7B-201ENST00000242839 FOXD4L4Q8WXT5 416 aaPredicted RBP14.31□□□□□ -0.12
ATP7B-201ENST00000242839 MS4A1P11836 297 aa14.3□□□□□ -0.12
ATP7B-201ENST00000242839 SLKQ9H2G2 1235 aaPredicted RBP14.29□□□□□ -0.12
ATP7B-201ENST00000242839 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
ATP7B-201ENST00000242839 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
ATP7B-201ENST00000242839 TOMM22Q9NS69 142 aa14.28□□□□□ -0.12
ATP7B-201ENST00000242839 TMF1P82094 1093 aa14.28□□□□□ -0.12
ATP7B-201ENST00000242839 DEKP35659 375 aaKnown RBP14.27□□□□□ -0.12
ATP7B-201ENST00000242839 KRI1Q8N9T8 703 aaKnown RBP14.27□□□□□ -0.12
ATP7B-201ENST00000242839 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.13
ATP7B-201ENST00000242839 NUTM2DQ5VT03 806 aaPredicted RBP14.26□□□□□ -0.13
ATP7B-201ENST00000242839 GGT6Q6P531 493 aa14.26□□□□□ -0.13
ATP7B-201ENST00000242839 PES1O00541 588 aaKnown RBP14.25□□□□□ -0.13
ATP7B-201ENST00000242839 RAD21O60216 631 aa14.25□□□□□ -0.13
ATP7B-201ENST00000242839 MFAP1P55081 439 aaKnown RBP14.25□□□□□ -0.13
ATP7B-201ENST00000242839 MARCH6O60337 910 aa14.25□□□□□ -0.13
ATP7B-201ENST00000242839 FRAT2O75474 233 aaPredicted RBP14.25□□□□□ -0.13
ATP7B-201ENST00000242839 TNNT3P45378 269 aaPredicted RBP14.24□□□□□ -0.13
ATP7B-201ENST00000242839 SLC4A10Q6U841 1118 aa14.24□□□□□ -0.13
ATP7B-201ENST00000242839 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
ATP7B-201ENST00000242839 MSH5O43196 834 aa14.23□□□□□ -0.13
ATP7B-201ENST00000242839 TPM4P67936 248 aa14.22□□□□□ -0.13
ATP7B-201ENST00000242839 NUTM2FA1L443 756 aa14.22□□□□□ -0.13
ATP7B-201ENST00000242839 EIF4G1Q04637 1599 aaKnown RBP14.21□□□□□ -0.13
ATP7B-201ENST00000242839 FOXD1Q16676 465 aa14.21□□□□□ -0.13
ATP7B-201ENST00000242839 HDGFL2Q7Z4V5 671 aaPredicted RBP14.2□□□□□ -0.14
ATP7B-201ENST00000242839 DCAF1Q9Y4B6 1507 aa14.2□□□□□ -0.14
ATP7B-201ENST00000242839 U2AF1L5P0DN76 240 aaPredicted RBP14.2□□□□□ -0.14
ATP7B-201ENST00000242839 U2AF1Q01081 240 aaKnown RBP eCLIP14.2□□□□□ -0.14
ATP7B-201ENST00000242839 KANK1Q14678 1352 aa14.2□□□□□ -0.14
ATP7B-201ENST00000242839 GOLGA6L1Q8N7Z2 621 aa14.2□□□□□ -0.14
ATP7B-201ENST00000242839 CEP89Q96ST8 783 aa14.2□□□□□ -0.14
ATP7B-201ENST00000242839 ERCC6Q03468 1493 aa14.19□□□□□ -0.14
ATP7B-201ENST00000242839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
ATP7B-201ENST00000242839 FOXD4L6Q3SYB3 417 aaPredicted RBP14.19□□□□□ -0.14
ATP7B-201ENST00000242839 FOXD4L3Q6VB84 417 aaPredicted RBP14.19□□□□□ -0.14
ATP7B-201ENST00000242839 HDGFP51858 240 aaKnown RBP14.18□□□□□ -0.14
ATP7B-201ENST00000242839 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
ATP7B-201ENST00000242839 CCDC146Q8IYE0 955 aa14.18□□□□□ -0.14
ATP7B-201ENST00000242839 GBP4Q96PP9 640 aa14.17□□□□□ -0.14
ATP7B-201ENST00000242839 GPATCH3Q96I76 525 aa14.16□□□□□ -0.14
ATP7B-201ENST00000242839 FBXW7Q969H0 707 aa14.15□□□□□ -0.14
ATP7B-201ENST00000242839 KLHL34Q8N239 644 aa14.15□□□□□ -0.14
ATP7B-201ENST00000242839 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
ATP7B-201ENST00000242839 HTATSF1O43719 755 aaKnown RBP14.15□□□□□ -0.15
ATP7B-201ENST00000242839 CCAR2Q8N163 923 aaKnown RBP14.14□□□□□ -0.15
ATP7B-201ENST00000242839 IPO8O15397 1037 aaKnown RBP14.14□□□□□ -0.15
ATP7B-201ENST00000242839 TPD52L1Q16890 204 aaPredicted RBP14.14□□□□□ -0.15
ATP7B-201ENST00000242839 CLUAP1Q96AJ1 413 aa14.14□□□□□ -0.15
ATP7B-201ENST00000242839 NGEFQ8N5V2 710 aa14.13□□□□□ -0.15
ATP7B-201ENST00000242839 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
ATP7B-201ENST00000242839 STK31Q9BXU1 1019 aa14.13□□□□□ -0.15
ATP7B-201ENST00000242839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.153e-6■■□□□ 13.8
ATP7B-201ENST00000242839 CCNB3Q8WWL7 1395 aa14.12□□□□□ -0.15
ATP7B-201ENST00000242839 SMC4Q9NTJ3 1288 aa14.12□□□□□ -0.15
ATP7B-201ENST00000242839 CEP162Q5TB80 1403 aa14.11□□□□□ -0.15
ATP7B-201ENST00000242839 SPAG9O60271 1321 aaKnown RBP14.11□□□□□ -0.15
ATP7B-201ENST00000242839 TPM3P06753 285 aa14.1□□□□□ -0.15
ATP7B-201ENST00000242839 SYAP1Q96A49 352 aaPredicted RBP14.1□□□□□ -0.15
ATP7B-201ENST00000242839 SF3A1Q15459 793 aaKnown RBP14.1□□□□□ -0.15
ATP7B-201ENST00000242839 TCEAL9Q9UHQ7 104 aa14.1□□□□□ -0.15
ATP7B-201ENST00000242839 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
ATP7B-201ENST00000242839 RWDD1Q9H446 243 aaPredicted RBP14.09□□□□□ -0.15
ATP7B-201ENST00000242839 GOLGA3Q08378 1498 aa14.08□□□□□ -0.16
ATP7B-201ENST00000242839 RILPL2Q969X0 211 aa14.08□□□□□ -0.16
ATP7B-201ENST00000242839 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.16
ATP7B-201ENST00000242839 KTN1Q86UP2 1357 aaKnown RBP14.08□□□□□ -0.16
ATP7B-201ENST00000242839 CTDP1Q9Y5B0 961 aaPredicted RBP14.07□□□□□ -0.16
ATP7B-201ENST00000242839 H3BQV1 296 aa14.07□□□□□ -0.16
ATP7B-201ENST00000242839 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
ATP7B-201ENST00000242839 GOLGA6L3A6NEY3 463 aa14.07□□□□□ -0.16
ATP7B-201ENST00000242839 NGDNQ8NEJ9 315 aaKnown RBP14.07□□□□□ -0.16
ATP7B-201ENST00000242839 CFAP44Q96MT7 982 aa14.07□□□□□ -0.16
ATP7B-201ENST00000242839 TRIM34Q9BYJ4 488 aa14.06□□□□□ -0.16
ATP7B-201ENST00000242839 AMPHP49418 695 aa14.06□□□□□ -0.16
ATP7B-201ENST00000242839 RBM19Q9Y4C8 960 aaKnown RBP14.06□□□□□ -0.16
ATP7B-201ENST00000242839 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
ATP7B-201ENST00000242839 PCMTD1Q96MG8 357 aaPredicted RBP14.06□□□□□ -0.16
ATP7B-201ENST00000242839 RCAN3Q9UKA8 241 aa14.06□□□□□ -0.16
ATP7B-201ENST00000242839 KIF16BQ96L93 1317 aa14.05□□□□□ -0.16
ATP7B-201ENST00000242839 CALD1Q05682 793 aaKnown RBP14.05□□□□□ -0.16
ATP7B-201ENST00000242839 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms