RNA–Protein interactions for RNA: ENST00000242059.9

SCRN1-201, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRN1, Length 5,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-201ENST00000242059 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.42
SCRN1-201ENST00000242059 WIZO95785 1651 aa12.46□□□□□ -0.42
SCRN1-201ENST00000242059 PRKCSHP14314 528 aaPredicted RBP12.46□□□□□ -0.42
SCRN1-201ENST00000242059 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCRN1-201ENST00000242059 GTF2E1P29083 439 aaPredicted RBP12.45□□□□□ -0.42
SCRN1-201ENST00000242059 FKBP8Q14318 412 aa12.45□□□□□ -0.42
SCRN1-201ENST00000242059 ZRSR1Q15695 479 aaKnown RBP12.45□□□□□ -0.42
SCRN1-201ENST00000242059 DCAF11Q8TEB1 546 aa12.44□□□□□ -0.42
SCRN1-201ENST00000242059 TERF2IPQ9NYB0 399 aa12.44□□□□□ -0.42
SCRN1-201ENST00000242059 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
SCRN1-201ENST00000242059 MORC1Q86VD1 984 aa12.44□□□□□ -0.42
SCRN1-201ENST00000242059 MIER1Q8N108 512 aa12.44□□□□□ -0.42
SCRN1-201ENST00000242059 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
SCRN1-201ENST00000242059 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
SCRN1-201ENST00000242059 MSH5O43196 834 aa12.43□□□□□ -0.42
SCRN1-201ENST00000242059 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.43□□□□□ -0.42
SCRN1-201ENST00000242059 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
SCRN1-201ENST00000242059 ATF3P18847 181 aa12.42□□□□□ -0.42
SCRN1-201ENST00000242059 ZNF330Q9Y3S2 320 aaPredicted RBP12.42□□□□□ -0.42
SCRN1-201ENST00000242059 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
SCRN1-201ENST00000242059 FGD1P98174 961 aa12.4□□□□□ -0.42
SCRN1-201ENST00000242059 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
SCRN1-201ENST00000242059 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
SCRN1-201ENST00000242059 CCDC18Q5T9S5 1454 aa12.38□□□□□ -0.43
SCRN1-201ENST00000242059 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
SCRN1-201ENST00000242059 AMPHP49418 695 aa12.38□□□□□ -0.43
SCRN1-201ENST00000242059 GLIPR1L2Q4G1C9 344 aa12.38□□□□□ -0.43
SCRN1-201ENST00000242059 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
SCRN1-201ENST00000242059 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
SCRN1-201ENST00000242059 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
SCRN1-201ENST00000242059 ARHGAP35Q9NRY4 1499 aa12.36□□□□□ -0.43
SCRN1-201ENST00000242059 KCNJ4P48050 445 aa12.36□□□□□ -0.43
SCRN1-201ENST00000242059 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
SCRN1-201ENST00000242059 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
SCRN1-201ENST00000242059 UACAQ9BZF9 1416 aa12.36□□□□□ -0.43
SCRN1-201ENST00000242059 NUP155O75694 1391 aa12.36□□□□□ -0.43
SCRN1-201ENST00000242059 PKD2Q13563 968 aa12.36□□□□□ -0.43
SCRN1-201ENST00000242059 NBR1Q14596 966 aa12.36□□□□□ -0.43
SCRN1-201ENST00000242059 CFAP44Q96MT7 982 aa12.33□□□□□ -0.44
SCRN1-201ENST00000242059 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
SCRN1-201ENST00000242059 POGZQ7Z3K3 1410 aa12.32□□□□□ -0.44
SCRN1-201ENST00000242059 HNRNPMP52272 730 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCRN1-201ENST00000242059 STK31Q9BXU1 1019 aa12.31□□□□□ -0.44
SCRN1-201ENST00000242059 GORABQ5T7V8 394 aa12.31□□□□□ -0.44
SCRN1-201ENST00000242059 RAPGEF2Q9Y4G8 1499 aa12.31□□□□□ -0.44
SCRN1-201ENST00000242059 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
SCRN1-201ENST00000242059 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
SCRN1-201ENST00000242059 GOLGA6L22H0YM25 854 aa12.3□□□□□ -0.44
SCRN1-201ENST00000242059 PSME1Q06323 249 aa12.3□□□□□ -0.44
SCRN1-201ENST00000242059 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
SCRN1-201ENST00000242059 TIMELESSQ9UNS1 1208 aa12.29□□□□□ -0.44
SCRN1-201ENST00000242059 CLSTN1O94985 981 aa12.29□□□□□ -0.44
SCRN1-201ENST00000242059 BECN1Q14457 450 aa12.29□□□□□ -0.44
SCRN1-201ENST00000242059 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
SCRN1-201ENST00000242059 FRAT2O75474 233 aaPredicted RBP12.28□□□□□ -0.44
SCRN1-201ENST00000242059 SMARCA4P51532 1647 aa12.28□□□□□ -0.44
SCRN1-201ENST00000242059 IPO8O15397 1037 aaKnown RBP12.28□□□□□ -0.44
SCRN1-201ENST00000242059 NESP48681 1621 aa12.28□□□□□ -0.44
SCRN1-201ENST00000242059 CC2D1BQ5T0F9 858 aaKnown RBP12.27□□□□□ -0.45
SCRN1-201ENST00000242059 NAP1L2Q9ULW6 460 aaPredicted RBP12.26□□□□□ -0.45
SCRN1-201ENST00000242059 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
SCRN1-201ENST00000242059 DEKP35659 375 aaKnown RBP12.25□□□□□ -0.45
SCRN1-201ENST00000242059 THEMISQ8N1K5 641 aaPredicted RBP12.25□□□□□ -0.45
SCRN1-201ENST00000242059 MCCP23508 829 aa12.24□□□□□ -0.45
SCRN1-201ENST00000242059 TTC5Q8N0Z6 440 aa12.24□□□□□ -0.45
SCRN1-201ENST00000242059 PROSER2Q86WR7 435 aaPredicted RBP12.23□□□□□ -0.45
SCRN1-201ENST00000242059 LTV1Q96GA3 475 aaPredicted RBP12.23□□□□□ -0.45
SCRN1-201ENST00000242059 CHMP3Q9Y3E7 222 aa12.23□□□□□ -0.45
SCRN1-201ENST00000242059 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
SCRN1-201ENST00000242059 ROCK2O75116 1388 aaKnown RBP12.23□□□□□ -0.45
SCRN1-201ENST00000242059 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
SCRN1-201ENST00000242059 COG3Q96JB2 828 aa12.22□□□□□ -0.45
SCRN1-201ENST00000242059 CWC22Q9HCG8 908 aaKnown RBP12.22□□□□□ -0.45
SCRN1-201ENST00000242059 U2AF1L5P0DN76 240 aaPredicted RBP12.22□□□□□ -0.45
SCRN1-201ENST00000242059 U2AF1Q01081 240 aaKnown RBP eCLIP12.22□□□□□ -0.45
SCRN1-201ENST00000242059 GPATCH3Q96I76 525 aa12.22□□□□□ -0.45
SCRN1-201ENST00000242059 NOL10Q9BSC4 688 aaKnown RBP12.22□□□□□ -0.45
SCRN1-201ENST00000242059 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
SCRN1-201ENST00000242059 CTDP1Q9Y5B0 961 aaPredicted RBP12.22□□□□□ -0.45
SCRN1-201ENST00000242059 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
SCRN1-201ENST00000242059 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
SCRN1-201ENST00000242059 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.45
SCRN1-201ENST00000242059 DDRGK1Q96HY6 314 aa12.21□□□□□ -0.46
SCRN1-201ENST00000242059 RBM19Q9Y4C8 960 aaKnown RBP12.2□□□□□ -0.46
SCRN1-201ENST00000242059 HIRIP3Q9BW71 556 aaPredicted RBP12.2□□□□□ -0.46
SCRN1-201ENST00000242059 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
SCRN1-201ENST00000242059 EVC2Q86UK5 1308 aa12.19□□□□□ -0.46
SCRN1-201ENST00000242059 SYTL4Q96C24 671 aaPredicted RBP12.19□□□□□ -0.46
SCRN1-201ENST00000242059 AMOTL1Q8IY63 956 aa12.19□□□□□ -0.46
SCRN1-201ENST00000242059 TEFQ10587 303 aa12.18□□□□□ -0.46
SCRN1-201ENST00000242059 RUSC2Q8N2Y8 1516 aa12.18□□□□□ -0.46
SCRN1-201ENST00000242059 RAD54L2Q9Y4B4 1467 aa12.18□□□□□ -0.46
SCRN1-201ENST00000242059 KIAA1211Q6ZU35 1233 aa12.18□□□□□ -0.46
SCRN1-201ENST00000242059 KRI1Q8N9T8 703 aaKnown RBP12.18□□□□□ -0.46
SCRN1-201ENST00000242059 GNL2Q13823 731 aaKnown RBP12.18□□□□□ -0.46
SCRN1-201ENST00000242059 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
SCRN1-201ENST00000242059 KTN1Q86UP2 1357 aaKnown RBP12.18□□□□□ -0.46
SCRN1-201ENST00000242059 STAC3Q96MF2 364 aa12.18□□□□□ -0.46
SCRN1-201ENST00000242059 ANKLE2Q86XL3 938 aa12.17□□□□□ -0.46
SCRN1-201ENST00000242059 HSP90B1P14625 803 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms