RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 NBPF8Q3BBV2 869 aa21.26■□□□□ 0.99
DDX55-201ENST00000238146 KIF21AQ7Z4S6 1674 aa21.25■□□□□ 0.99
DDX55-201ENST00000238146 MIA2Q96PC5 1412 aa21.24■□□□□ 0.99
DDX55-201ENST00000238146 ANKRD30BQ9BXX2 1392 aa21.23■□□□□ 0.99
DDX55-201ENST00000238146 RPRD2Q5VT52 1461 aaKnown RBP21.22■□□□□ 0.99
DDX55-201ENST00000238146 KIF7Q2M1P5 1343 aa21.22■□□□□ 0.99
DDX55-201ENST00000238146 SPATA31E1Q6ZUB1 1445 aa21.21■□□□□ 0.99
DDX55-201ENST00000238146 EPRSP07814 1512 aaKnown RBP21.21■□□□□ 0.99
DDX55-201ENST00000238146 LAMC3Q9Y6N6 1575 aa21.2■□□□□ 0.98
DDX55-201ENST00000238146 TEX14Q8IWB6 1497 aa21.2■□□□□ 0.98
DDX55-201ENST00000238146 CDK13Q14004 1512 aaKnown RBP21.16■□□□□ 0.98
DDX55-201ENST00000238146 ROCK1Q13464 1354 aa21.14■□□□□ 0.97
DDX55-201ENST00000238146 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
DDX55-201ENST00000238146 DAPK1P53355 1430 aa21.12■□□□□ 0.97
DDX55-201ENST00000238146 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
DDX55-201ENST00000238146 ARID3CA6NKF2 412 aa21.12■□□□□ 0.97
DDX55-201ENST00000238146 SMG6Q86US8 1419 aaKnown RBP21.11■□□□□ 0.97
DDX55-201ENST00000238146 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
DDX55-201ENST00000238146 ABCC5O15440 1437 aa21.09■□□□□ 0.97
DDX55-201ENST00000238146 WDR62O43379 1518 aa21.09■□□□□ 0.97
DDX55-201ENST00000238146 DHX29Q7Z478 1369 aaKnown RBP21.08■□□□□ 0.97
DDX55-201ENST00000238146 IQGAP2Q13576 1575 aa21.08■□□□□ 0.96
DDX55-201ENST00000238146 NOP58Q9Y2X3 529 aaKnown RBP21.06■□□□□ 0.96
DDX55-201ENST00000238146 RNF123Q5XPI4 1314 aa21.06■□□□□ 0.96
DDX55-201ENST00000238146 NUDCQ9Y266 331 aa21.06■□□□□ 0.96
DDX55-201ENST00000238146 ZNF644Q9H582 1327 aaPredicted RBP21.05■□□□□ 0.96
DDX55-201ENST00000238146 DNMT1P26358 1616 aaKnown RBP21.05■□□□□ 0.96
DDX55-201ENST00000238146 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
DDX55-201ENST00000238146 DEKP35659 375 aaKnown RBP21.03■□□□□ 0.96
DDX55-201ENST00000238146 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
DDX55-201ENST00000238146 PAK3O75914 559 aaPredicted RBP21.02■□□□□ 0.96
DDX55-201ENST00000238146 CNGB1Q14028 1251 aaPredicted RBP21.01■□□□□ 0.95
DDX55-201ENST00000238146 CCDC136Q96JN2 1154 aa21■□□□□ 0.95
DDX55-201ENST00000238146 PZPP20742 1482 aa21■□□□□ 0.95
DDX55-201ENST00000238146 MBD5Q9P267 1494 aa20.99■□□□□ 0.95
DDX55-201ENST00000238146 USP47Q96K76 1375 aa20.98■□□□□ 0.95
DDX55-201ENST00000238146 BCORL1Q5H9F3 1711 aa20.98■□□□□ 0.95
DDX55-201ENST00000238146 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
DDX55-201ENST00000238146 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
DDX55-201ENST00000238146 PNISRQ8TF01 805 aaKnown RBP20.95■□□□□ 0.94
DDX55-201ENST00000238146 ADAMTS12P58397 1594 aa20.94■□□□□ 0.94
DDX55-201ENST00000238146 NBR1Q14596 966 aa20.94■□□□□ 0.94
DDX55-201ENST00000238146 ARID4BQ4LE39 1312 aaPredicted RBP20.94■□□□□ 0.94
DDX55-201ENST00000238146 ZNF326Q5BKZ1 582 aaKnown RBP20.93■□□□□ 0.94
DDX55-201ENST00000238146 SENP3-EIF4A1A0A087X0R7 540 aa20.92■□□□□ 0.94
DDX55-201ENST00000238146 IPO9Q96P70 1041 aaKnown RBP20.91■□□□□ 0.94
DDX55-201ENST00000238146 KIAA1107Q9UPP5 1409 aa20.91■□□□□ 0.94
DDX55-201ENST00000238146 ANP32AP39687 249 aaKnown RBP20.91■□□□□ 0.94
DDX55-201ENST00000238146 NUP153P49790 1475 aaKnown RBP20.91■□□□□ 0.94
DDX55-201ENST00000238146 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
DDX55-201ENST00000238146 KDM5CP41229 1560 aa20.89■□□□□ 0.94
DDX55-201ENST00000238146 KIF14Q15058 1648 aa20.88■□□□□ 0.93
DDX55-201ENST00000238146 PKD2Q13563 968 aa20.88■□□□□ 0.93
DDX55-201ENST00000238146 ROCK2O75116 1388 aaKnown RBP20.87■□□□□ 0.93
DDX55-201ENST00000238146 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
DDX55-201ENST00000238146 CAMSAP2Q08AD1 1489 aa20.86■□□□□ 0.93
DDX55-201ENST00000238146 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
DDX55-201ENST00000238146 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
DDX55-201ENST00000238146 KIAA0556O60303 1618 aa20.84■□□□□ 0.93
DDX55-201ENST00000238146 LRPPRCP42704 1394 aaKnown RBP20.84■□□□□ 0.93
DDX55-201ENST00000238146 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.93
DDX55-201ENST00000238146 UHRF1BP1Q6BDS2 1440 aa20.83■□□□□ 0.92
DDX55-201ENST00000238146 PRG4Q92954 1404 aaPredicted RBP20.82■□□□□ 0.92
DDX55-201ENST00000238146 KIF15Q9NS87 1388 aa20.82■□□□□ 0.92
DDX55-201ENST00000238146 RAPGEF6Q8TEU7 1601 aa20.82■□□□□ 0.92
DDX55-201ENST00000238146 ADGRL2O95490 1459 aa20.81■□□□□ 0.92
DDX55-201ENST00000238146 RALGAPBQ86X10 1494 aa20.81■□□□□ 0.92
DDX55-201ENST00000238146 KIAA0586Q9BVV6 1533 aa20.81■□□□□ 0.92
DDX55-201ENST00000238146 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
DDX55-201ENST00000238146 TROQ12816 1431 aaPredicted RBP20.8■□□□□ 0.92
DDX55-201ENST00000238146 CARD11Q9BXL7 1154 aa20.8■□□□□ 0.92
DDX55-201ENST00000238146 BRD4O60885 1362 aaPredicted RBP20.79■□□□□ 0.92
DDX55-201ENST00000238146 GPATCH8Q9UKJ3 1502 aaKnown RBP20.79■□□□□ 0.92
DDX55-201ENST00000238146 ZNF777Q9ULD5 760 aaPredicted RBP20.78■□□□□ 0.92
DDX55-201ENST00000238146 MYBBP1AQ9BQG0 1328 aaKnown RBP20.78■□□□□ 0.92
DDX55-201ENST00000238146 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
DDX55-201ENST00000238146 ANKRD30AQ9BXX3 1397 aa20.77■□□□□ 0.92
DDX55-201ENST00000238146 ANKRD50Q9ULJ7 1429 aa20.76■□□□□ 0.91
DDX55-201ENST00000238146 ST20-MTHFSA0A0A6YYL1 179 aa20.76■□□□□ 0.91
DDX55-201ENST00000238146 RALBP1Q15311 655 aa20.76■□□□□ 0.91
DDX55-201ENST00000238146 EXOC6Q8TAG9 804 aa20.75■□□□□ 0.91
DDX55-201ENST00000238146 KTN1Q86UP2 1357 aaKnown RBP20.75■□□□□ 0.91
DDX55-201ENST00000238146 ITSN2Q9NZM3 1697 aa20.75■□□□□ 0.91
DDX55-201ENST00000238146 RTL5Q5HYW3 569 aaPredicted RBP20.74■□□□□ 0.91
DDX55-201ENST00000238146 CROCC2H7BZ55 1655 aa20.73■□□□□ 0.91
DDX55-201ENST00000238146 ARHGEF12Q9NZN5 1544 aa20.73■□□□□ 0.91
DDX55-201ENST00000238146 NUP155O75694 1391 aa20.72■□□□□ 0.91
DDX55-201ENST00000238146 RCAN3Q9UKA8 241 aa20.72■□□□□ 0.91
DDX55-201ENST00000238146 TCERG1O14776 1098 aaKnown RBP20.71■□□□□ 0.91
DDX55-201ENST00000238146 ZNF608Q9ULD9 1512 aaPredicted RBP20.71■□□□□ 0.91
DDX55-201ENST00000238146 KDM2AQ9Y2K7 1162 aa20.71■□□□□ 0.91
DDX55-201ENST00000238146 PLB1Q6P1J6 1458 aa20.67■□□□□ 0.9
DDX55-201ENST00000238146 PDE4AP27815 886 aa20.67■□□□□ 0.9
DDX55-201ENST00000238146 NPM2Q86SE8 214 aaKnown RBP20.67■□□□□ 0.9
DDX55-201ENST00000238146 SALL2Q9Y467 1007 aaPredicted RBP20.67■□□□□ 0.9
DDX55-201ENST00000238146 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
DDX55-201ENST00000238146 ADCY10Q96PN6 1610 aa20.67■□□□□ 0.9
DDX55-201ENST00000238146 DCAF11Q8TEB1 546 aa20.67■□□□□ 0.9
DDX55-201ENST00000238146 E9PCH4 1651 aa20.66■□□□□ 0.9
DDX55-201ENST00000238146 NLRP13Q86W25 1043 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms