RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.67
NANOG-201ENST00000229307 CLSPNQ9HAW4 1339 aa10.83□□□□□ -0.68
NANOG-201ENST00000229307 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
NANOG-201ENST00000229307 KIF3BO15066 747 aa10.81□□□□□ -0.68
NANOG-201ENST00000229307 TMC1Q8TDI8 760 aa10.81□□□□□ -0.68
NANOG-201ENST00000229307 SENP3Q9H4L4 574 aaPredicted RBP10.81□□□□□ -0.68
NANOG-201ENST00000229307 ZBTB7CA1YPR0 619 aa10.8□□□□□ -0.68
NANOG-201ENST00000229307 WASHC2CQ9Y4E1 1318 aa10.79□□□□□ -0.68
NANOG-201ENST00000229307 HNRNPMP52272 730 aaKnown RBP eCLIP10.79□□□□□ -0.68
NANOG-201ENST00000229307 NPM2Q86SE8 214 aaKnown RBP10.79□□□□□ -0.68
NANOG-201ENST00000229307 WDR43Q15061 677 aaKnown RBP eCLIP10.78□□□□□ -0.68
NANOG-201ENST00000229307 CARD11Q9BXL7 1154 aa10.78□□□□□ -0.68
NANOG-201ENST00000229307 ABCC2Q92887 1545 aa10.77□□□□□ -0.69
NANOG-201ENST00000229307 ASXL2Q76L83 1435 aa10.76□□□□□ -0.69
NANOG-201ENST00000229307 SETD5Q9C0A6 1442 aa10.76□□□□□ -0.69
NANOG-201ENST00000229307 PHLDB1Q86UU1 1377 aa10.76□□□□□ -0.69
NANOG-201ENST00000229307 CFAP53Q96M91 514 aa10.76□□□□□ -0.69
NANOG-201ENST00000229307 NUP155O75694 1391 aa10.76□□□□□ -0.69
NANOG-201ENST00000229307 A0A0G2JS52 829 aa10.75□□□□□ -0.69
NANOG-201ENST00000229307 RUSC2Q8N2Y8 1516 aa10.75□□□□□ -0.69
NANOG-201ENST00000229307 CD109Q6YHK3 1445 aa10.75□□□□□ -0.69
NANOG-201ENST00000229307 KANK4Q5T7N3 995 aaPredicted RBP10.74□□□□□ -0.69
NANOG-201ENST00000229307 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
NANOG-201ENST00000229307 PKD2Q13563 968 aa10.74□□□□□ -0.69
NANOG-201ENST00000229307 ABCC10Q5T3U5 1492 aa10.73□□□□□ -0.69
NANOG-201ENST00000229307 KNSTRNQ9Y448 316 aa10.73□□□□□ -0.69
NANOG-201ENST00000229307 UGGT2Q9NYU1 1516 aa10.73□□□□□ -0.69
NANOG-201ENST00000229307 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
NANOG-201ENST00000229307 POGZQ7Z3K3 1410 aa10.72□□□□□ -0.69
NANOG-201ENST00000229307 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
NANOG-201ENST00000229307 DCAF11Q8TEB1 546 aa10.72□□□□□ -0.69
NANOG-201ENST00000229307 PRXQ9BXM0 1461 aa10.72□□□□□ -0.69
NANOG-201ENST00000229307 UHRF1BP1LA0JNW5 1464 aa10.71□□□□□ -0.69
NANOG-201ENST00000229307 EFCAB5A4FU69 1503 aa10.71□□□□□ -0.7
NANOG-201ENST00000229307 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
NANOG-201ENST00000229307 WDR7Q9Y4E6 1490 aa10.7□□□□□ -0.7
NANOG-201ENST00000229307 TMF1P82094 1093 aa10.69□□□□□ -0.7
NANOG-201ENST00000229307 KIF21BO75037 1637 aa10.68□□□□□ -0.7
NANOG-201ENST00000229307 SRPK2P78362 688 aaKnown RBP10.67□□□□□ -0.7
NANOG-201ENST00000229307 MYOM3Q5VTT5 1437 aa10.67□□□□□ -0.7
NANOG-201ENST00000229307 NUDCQ9Y266 331 aa10.67□□□□□ -0.7
NANOG-201ENST00000229307 CASKIN1Q8WXD9 1431 aa10.67□□□□□ -0.7
NANOG-201ENST00000229307 SHROOM2Q13796 1616 aa10.67□□□□□ -0.7
NANOG-201ENST00000229307 EIF3AQ14152 1382 aaKnown RBP10.66□□□□□ -0.7
NANOG-201ENST00000229307 MPHOSPH9Q99550 1183 aa10.66□□□□□ -0.7
NANOG-201ENST00000229307 MAPKBP1O60336 1514 aa10.66□□□□□ -0.7
NANOG-201ENST00000229307 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
NANOG-201ENST00000229307 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
NANOG-201ENST00000229307 HDGFL2Q7Z4V5 671 aaPredicted RBP10.65□□□□□ -0.71
NANOG-201ENST00000229307 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.65□□□□□ -0.71
NANOG-201ENST00000229307 ERCC6L2Q5T890 1561 aa10.64□□□□□ -0.71
NANOG-201ENST00000229307 PNNQ9H307 717 aaKnown RBP10.64□□□□□ -0.71
NANOG-201ENST00000229307 ARHGAP5Q13017 1502 aa10.64□□□□□ -0.71
NANOG-201ENST00000229307 KDM6BO15054 1643 aa10.64□□□□□ -0.71
NANOG-201ENST00000229307 STK26Q9P289 416 aa10.63□□□□□ -0.71
NANOG-201ENST00000229307 FAM9BQ8IZU0 186 aa10.63□□□□□ -0.71
NANOG-201ENST00000229307 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.63□□□□□ -0.71
NANOG-201ENST00000229307 FYCO1Q9BQS8 1478 aa10.63□□□□□ -0.71
NANOG-201ENST00000229307 MRS2Q9HD23 443 aa10.63□□□□□ -0.71
NANOG-201ENST00000229307 PPM1GO15355 546 aaPredicted RBP10.62□□□□□ -0.71
NANOG-201ENST00000229307 VGFO15240 615 aaPredicted RBP10.61□□□□□ -0.71
NANOG-201ENST00000229307 CTTNBP2Q8WZ74 1663 aa10.61□□□□□ -0.71
NANOG-201ENST00000229307 HECW1Q76N89 1606 aa10.61□□□□□ -0.71
NANOG-201ENST00000229307 SIN3AQ96ST3 1273 aa10.61□□□□□ -0.71
NANOG-201ENST00000229307 DISP1Q96F81 1524 aa10.61□□□□□ -0.71
NANOG-201ENST00000229307 KDM5BQ9UGL1 1544 aa10.6□□□□□ -0.71
NANOG-201ENST00000229307 MAPK8IP3Q9UPT6 1336 aa10.6□□□□□ -0.71
NANOG-201ENST00000229307 AKNAQ7Z591 1439 aa10.6□□□□□ -0.71
NANOG-201ENST00000229307 RAB3GAP2Q9H2M9 1393 aa10.59□□□□□ -0.71
NANOG-201ENST00000229307 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
NANOG-201ENST00000229307 EPRSP07814 1512 aaKnown RBP10.59□□□□□ -0.71
NANOG-201ENST00000229307 DENND4BO75064 1496 aaPredicted RBP10.59□□□□□ -0.71
NANOG-201ENST00000229307 SAFB2Q14151 953 aaKnown RBP eCLIP10.58□□□□□ -0.72
NANOG-201ENST00000229307 ROCK2O75116 1388 aaKnown RBP10.58□□□□□ -0.72
NANOG-201ENST00000229307 HNRNPUQ00839 825 aaKnown RBP eCLIP10.58□□□□□ -0.72
NANOG-201ENST00000229307 BCL11AQ9H165 835 aa10.57□□□□□ -0.72
NANOG-201ENST00000229307 TROQ12816 1431 aaPredicted RBP10.56□□□□□ -0.72
NANOG-201ENST00000229307 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
NANOG-201ENST00000229307 KIF15Q9NS87 1388 aa10.56□□□□□ -0.72
NANOG-201ENST00000229307 EHBP1L1Q8N3D4 1523 aa10.55□□□□□ -0.72
NANOG-201ENST00000229307 RAPGEF3O95398 923 aa10.55□□□□□ -0.72
NANOG-201ENST00000229307 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
NANOG-201ENST00000229307 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
NANOG-201ENST00000229307 TERF2IPQ9NYB0 399 aa10.55□□□□□ -0.72
NANOG-201ENST00000229307 FGD6Q6ZV73 1430 aa10.55□□□□□ -0.72
NANOG-201ENST00000229307 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
NANOG-201ENST00000229307 RAPGEF6Q8TEU7 1601 aa10.54□□□□□ -0.72
NANOG-201ENST00000229307 DMRT2Q9Y5R5 561 aa10.54□□□□□ -0.72
NANOG-201ENST00000229307 MYH16Q9H6N6 1097 aa10.54□□□□□ -0.72
NANOG-201ENST00000229307 NCOA2Q15596 1464 aa10.54□□□□□ -0.72
NANOG-201ENST00000229307 LRRC9Q6ZRR7 1453 aa10.54□□□□□ -0.72
NANOG-201ENST00000229307 NEO1Q92859 1461 aa10.54□□□□□ -0.72
NANOG-201ENST00000229307 ATP10BO94823 1461 aa10.54□□□□□ -0.72
NANOG-201ENST00000229307 FOXD1Q16676 465 aa10.54□□□□□ -0.72
NANOG-201ENST00000229307 SALL2Q9Y467 1007 aaPredicted RBP10.54□□□□□ -0.72
NANOG-201ENST00000229307 MORC1Q86VD1 984 aa10.53□□□□□ -0.72
NANOG-201ENST00000229307 NGDNQ8NEJ9 315 aaKnown RBP10.53□□□□□ -0.72
NANOG-201ENST00000229307 SCAPERQ9BY12 1400 aa10.53□□□□□ -0.72
NANOG-201ENST00000229307 CSB-PGBD3P0DP91 1061 aa10.53□□□□□ -0.72
NANOG-201ENST00000229307 TSPOAP1O95153 1857 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms