RNA–Protein interactions for RNA: ENST00000227157.8

LDHA-201, Transcript of lactate dehydrogenase A, humanhuman

TSL 3 BASIC

Gene LDHA, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-201ENST00000227157 SUPT6HQ7KZ85 1726 aaKnown RBP12.62□□□□□ -0.39
LDHA-201ENST00000227157 NCOA2Q15596 1464 aa12.6□□□□□ -0.39
LDHA-201ENST00000227157 PREX2Q70Z35 1606 aa12.58□□□□□ -0.4
LDHA-201ENST00000227157 ARHGAP5Q13017 1502 aa12.58□□□□□ -0.4
LDHA-201ENST00000227157 MAP3K1Q13233 1512 aa12.58□□□□□ -0.4
LDHA-201ENST00000227157 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
LDHA-201ENST00000227157 ZNF777Q9ULD5 760 aaPredicted RBP12.57□□□□□ -0.4
LDHA-201ENST00000227157 FANCAO15360 1455 aa12.57□□□□□ -0.4
LDHA-201ENST00000227157 COL17A1Q9UMD9 1497 aaPredicted RBP12.57□□□□□ -0.4
LDHA-201ENST00000227157 GPATCH8Q9UKJ3 1502 aaKnown RBP12.56□□□□□ -0.4
LDHA-201ENST00000227157 KDM6BO15054 1643 aa12.55□□□□□ -0.4
LDHA-201ENST00000227157 CCNB3Q8WWL7 1395 aa12.55□□□□□ -0.4
LDHA-201ENST00000227157 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
LDHA-201ENST00000227157 PLCH2O75038 1416 aa12.55□□□□□ -0.4
LDHA-201ENST00000227157 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
LDHA-201ENST00000227157 TEX14Q8IWB6 1497 aa12.54□□□□□ -0.4
LDHA-201ENST00000227157 ITSN2Q9NZM3 1697 aa12.54□□□□□ -0.4
LDHA-201ENST00000227157 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
LDHA-201ENST00000227157 SAMD9LQ8IVG5 1584 aa12.53□□□□□ -0.4
LDHA-201ENST00000227157 RAPGEF3O95398 923 aa12.53□□□□□ -0.4
LDHA-201ENST00000227157 AKNAQ7Z591 1439 aa12.52□□□□□ -0.41
LDHA-201ENST00000227157 CFDP1Q9UEE9 299 aaPredicted RBP12.51□□□□□ -0.41
LDHA-201ENST00000227157 ADGRL1O94910 1474 aa12.5□□□□□ -0.41
LDHA-201ENST00000227157 CFAP74Q9C0B2 1584 aa12.5□□□□□ -0.41
LDHA-201ENST00000227157 ARHGEF12Q9NZN5 1544 aa12.5□□□□□ -0.41
LDHA-201ENST00000227157 EFCAB2Q5VUJ9 269 aa12.49□□□□□ -0.41
LDHA-201ENST00000227157 SYCP2Q9BX26 1530 aa12.49□□□□□ -0.41
LDHA-201ENST00000227157 FRMPD1Q5SYB0 1578 aa12.49□□□□□ -0.41
LDHA-201ENST00000227157 RICTORQ6R327 1708 aa12.49□□□□□ -0.41
LDHA-201ENST00000227157 HNRNPMP52272 730 aaKnown RBP eCLIP12.48□□□□□ -0.41
LDHA-201ENST00000227157 NEO1Q92859 1461 aa12.48□□□□□ -0.41
LDHA-201ENST00000227157 SCAPERQ9BY12 1400 aa12.48□□□□□ -0.41
LDHA-201ENST00000227157 MYOM3Q5VTT5 1437 aa12.48□□□□□ -0.41
LDHA-201ENST00000227157 ABCC1P33527 1531 aa12.47□□□□□ -0.41
LDHA-201ENST00000227157 ARAP3Q8WWN8 1544 aa12.47□□□□□ -0.41
LDHA-201ENST00000227157 CAMSAP2Q08AD1 1489 aa12.47□□□□□ -0.41
LDHA-201ENST00000227157 TRAPPC8Q9Y2L5 1435 aa12.46□□□□□ -0.41
LDHA-201ENST00000227157 AFAP1Q8N556 730 aa12.46□□□□□ -0.42
LDHA-201ENST00000227157 PTPN23Q9H3S7 1636 aa12.45□□□□□ -0.42
LDHA-201ENST00000227157 DENND4BO75064 1496 aaPredicted RBP12.44□□□□□ -0.42
LDHA-201ENST00000227157 FGD6Q6ZV73 1430 aa12.44□□□□□ -0.42
LDHA-201ENST00000227157 POGZQ7Z3K3 1410 aa12.42□□□□□ -0.42
LDHA-201ENST00000227157 FAM50AQ14320 339 aaKnown RBP12.42□□□□□ -0.42
LDHA-201ENST00000227157 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
LDHA-201ENST00000227157 YEATS2Q9ULM3 1422 aa12.41□□□□□ -0.42
LDHA-201ENST00000227157 ITGAEP38570 1179 aa12.4□□□□□ -0.42
LDHA-201ENST00000227157 MBD5Q9P267 1494 aa12.4□□□□□ -0.42
LDHA-201ENST00000227157 SIGLEC1Q9BZZ2 1709 aa12.39□□□□□ -0.43
LDHA-201ENST00000227157 MIA2Q96PC5 1412 aa12.39□□□□□ -0.43
LDHA-201ENST00000227157 KIDINS220Q9ULH0 1771 aa12.39□□□□□ -0.43
LDHA-201ENST00000227157 ZNF518AQ6AHZ1 1483 aa12.38□□□□□ -0.43
LDHA-201ENST00000227157 KDM5CP41229 1560 aa12.38□□□□□ -0.43
LDHA-201ENST00000227157 HECW2Q9P2P5 1572 aa12.37□□□□□ -0.43
LDHA-201ENST00000227157 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
LDHA-201ENST00000227157 CHIC2Q9UKJ5 165 aa12.36□□□□□ -0.43
LDHA-201ENST00000227157 CROCC2H7BZ55 1655 aa12.36□□□□□ -0.43
LDHA-201ENST00000227157 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
LDHA-201ENST00000227157 TCOF1Q13428 1488 aaKnown RBP12.36□□□□□ -0.43
LDHA-201ENST00000227157 CCDC141Q6ZP82 1450 aa12.36□□□□□ -0.43
LDHA-201ENST00000227157 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
LDHA-201ENST00000227157 ZMYM4Q5VZL5 1548 aa12.35□□□□□ -0.43
LDHA-201ENST00000227157 ZFYVE16Q7Z3T8 1539 aa12.35□□□□□ -0.43
LDHA-201ENST00000227157 DNMT1P26358 1616 aaKnown RBP12.35□□□□□ -0.43
LDHA-201ENST00000227157 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
LDHA-201ENST00000227157 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
LDHA-201ENST00000227157 ARHGEF40Q8TER5 1519 aa12.34□□□□□ -0.43
LDHA-201ENST00000227157 ARHGEF5Q12774 1597 aa12.34□□□□□ -0.43
LDHA-201ENST00000227157 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
LDHA-201ENST00000227157 ABCC5O15440 1437 aa12.34□□□□□ -0.43
LDHA-201ENST00000227157 DIP2CQ9Y2E4 1556 aa12.34□□□□□ -0.43
LDHA-201ENST00000227157 DAPK1P53355 1430 aa12.33□□□□□ -0.44
LDHA-201ENST00000227157 ADGBQ8N7X0 1667 aa12.33□□□□□ -0.44
LDHA-201ENST00000227157 PTPRKQ15262 1439 aa12.33□□□□□ -0.44
LDHA-201ENST00000227157 RRBP1Q9P2E9 1410 aaKnown RBP12.31□□□□□ -0.44
LDHA-201ENST00000227157 C9orf84Q5VXU9 1444 aa12.31□□□□□ -0.44
LDHA-201ENST00000227157 MLH3Q9UHC1 1453 aa12.3□□□□□ -0.44
LDHA-201ENST00000227157 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
LDHA-201ENST00000227157 TSPY4P0CV99 314 aa12.29□□□□□ -0.44
LDHA-201ENST00000227157 TSPY10P0CW01 314 aa12.29□□□□□ -0.44
LDHA-201ENST00000227157 MLECQ14165 292 aa12.29□□□□□ -0.44
LDHA-201ENST00000227157 RRP7BPQ9NSQ0 103 aa12.29□□□□□ -0.44
LDHA-201ENST00000227157 ATP10AO60312 1499 aa12.27□□□□□ -0.44
LDHA-201ENST00000227157 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.44
LDHA-201ENST00000227157 MAST1Q9Y2H9 1570 aa12.26□□□□□ -0.45
LDHA-201ENST00000227157 RSPH4AQ5TD94 716 aa12.25□□□□□ -0.45
LDHA-201ENST00000227157 A2MP01023 1474 aa12.24□□□□□ -0.45
LDHA-201ENST00000227157 SHANK2Q9UPX8 1470 aa12.24□□□□□ -0.45
LDHA-201ENST00000227157 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
LDHA-201ENST00000227157 PLXNC1O60486 1568 aa12.24□□□□□ -0.45
LDHA-201ENST00000227157 RTEL1-TNFRSF6BF6WH68 1400 aa12.24□□□□□ -0.45
LDHA-201ENST00000227157 KIF15Q9NS87 1388 aa12.23□□□□□ -0.45
LDHA-201ENST00000227157 BCORL1Q5H9F3 1711 aa12.23□□□□□ -0.45
LDHA-201ENST00000227157 NCOA1Q15788 1441 aa12.22□□□□□ -0.45
LDHA-201ENST00000227157 GGT6Q6P531 493 aa12.21□□□□□ -0.45
LDHA-201ENST00000227157 MADDQ8WXG6 1647 aa12.21□□□□□ -0.45
LDHA-201ENST00000227157 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.46
LDHA-201ENST00000227157 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.46
LDHA-201ENST00000227157 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.46
LDHA-201ENST00000227157 KIF3BO15066 747 aa12.21□□□□□ -0.46
LDHA-201ENST00000227157 ANKRD30AQ9BXX3 1397 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms