RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 SLC39A7Q92504 469 aa9.61□□□□□ -0.87
AFP-201ENST00000226359 SPOCK2Q92563 424 aa9.6□□□□□ -0.87
AFP-201ENST00000226359 GRIN2AQ12879 1464 aa9.6□□□□□ -0.87
AFP-201ENST00000226359 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
AFP-201ENST00000226359 CLASP1Q7Z460 1538 aa9.6□□□□□ -0.87
AFP-201ENST00000226359 TPRNQ4KMQ1 711 aa9.58□□□□□ -0.88
AFP-201ENST00000226359 PAK3O75914 559 aaPredicted RBP9.58□□□□□ -0.88
AFP-201ENST00000226359 VSIG10Q8N0Z9 540 aa9.58□□□□□ -0.88
AFP-201ENST00000226359 CYB5RLQ6IPT4 315 aa9.57□□□□□ -0.88
AFP-201ENST00000226359 NUP160Q12769 1436 aa9.55□□□□□ -0.88
AFP-201ENST00000226359 ARAP1Q96P48 1450 aa9.55□□□□□ -0.88
AFP-201ENST00000226359 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
AFP-201ENST00000226359 KDM2AQ9Y2K7 1162 aa9.53□□□□□ -0.88
AFP-201ENST00000226359 CUL7Q14999 1698 aa9.53□□□□□ -0.88
AFP-201ENST00000226359 PLEKHG5O94827 1062 aa9.52□□□□□ -0.88
AFP-201ENST00000226359 CEP170Q5SW79 1584 aa9.52□□□□□ -0.89
AFP-201ENST00000226359 POTEJP0CG39 1038 aa9.51□□□□□ -0.89
AFP-201ENST00000226359 ASTLQ6HA08 431 aaPredicted RBP9.5□□□□□ -0.89
AFP-201ENST00000226359 IGF1RP08069 1367 aa9.5□□□□□ -0.89
AFP-201ENST00000226359 CARMIL1Q5VZK9 1371 aa9.5□□□□□ -0.89
AFP-201ENST00000226359 ZBTB47Q9UFB7 747 aaPredicted RBP9.48□□□□□ -0.89
AFP-201ENST00000226359 CREBZFQ9NS37 354 aa9.48□□□□□ -0.89
AFP-201ENST00000226359 ECM2O94769 699 aaPredicted RBP9.47□□□□□ -0.89
AFP-201ENST00000226359 MMRN1Q13201 1228 aa9.47□□□□□ -0.89
AFP-201ENST00000226359 JPH4Q96JJ6 628 aa9.46□□□□□ -0.89
AFP-201ENST00000226359 CIZ1Q9ULV3 898 aaPredicted RBP9.46□□□□□ -0.89
AFP-201ENST00000226359 PRG4Q92954 1404 aaPredicted RBP9.46□□□□□ -0.89
AFP-201ENST00000226359 RUSC2Q8N2Y8 1516 aa9.46□□□□□ -0.89
AFP-201ENST00000226359 KIAA0586Q9BVV6 1533 aa9.46□□□□□ -0.9
AFP-201ENST00000226359 SHROOM2Q13796 1616 aa9.45□□□□□ -0.9
AFP-201ENST00000226359 PHF12Q96QT6 1004 aa9.44□□□□□ -0.9
AFP-201ENST00000226359 RAPGEF2Q9Y4G8 1499 aa9.44□□□□□ -0.9
AFP-201ENST00000226359 ATMINO43313 823 aaPredicted RBP9.43□□□□□ -0.9
AFP-201ENST00000226359 MNX1P50219 401 aaPredicted RBP9.43□□□□□ -0.9
AFP-201ENST00000226359 CARMIL2Q6F5E8 1435 aa9.43□□□□□ -0.9
AFP-201ENST00000226359 RGL2O15211 777 aa9.43□□□□□ -0.9
AFP-201ENST00000226359 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
AFP-201ENST00000226359 ERCC6L2Q5T890 1561 aa9.41□□□□□ -0.9
AFP-201ENST00000226359 NUBP1P53384 320 aa9.41□□□□□ -0.9
AFP-201ENST00000226359 EEA1Q15075 1411 aa9.4□□□□□ -0.9
AFP-201ENST00000226359 PAXIP1Q6ZW49 1069 aaPredicted RBP9.4□□□□□ -0.9
AFP-201ENST00000226359 IQGAP2Q13576 1575 aa9.39□□□□□ -0.91
AFP-201ENST00000226359 SPNS2Q8IVW8 549 aa9.39□□□□□ -0.91
AFP-201ENST00000226359 FAM9AQ8IZU1 332 aaPredicted RBP9.39□□□□□ -0.91
AFP-201ENST00000226359 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
AFP-201ENST00000226359 TNIKQ9UKE5 1360 aa9.37□□□□□ -0.91
AFP-201ENST00000226359 BBXQ8WY36 941 aaPredicted RBP9.37□□□□□ -0.91
AFP-201ENST00000226359 PTPRGP23470 1445 aa9.36□□□□□ -0.91
AFP-201ENST00000226359 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.36□□□□□ -0.91
AFP-201ENST00000226359 TTBK1Q5TCY1 1321 aaPredicted RBP9.35□□□□□ -0.91
AFP-201ENST00000226359 GOLGA3Q08378 1498 aa9.34□□□□□ -0.91
AFP-201ENST00000226359 RASEFQ8IZ41 740 aa9.34□□□□□ -0.91
AFP-201ENST00000226359 PRXQ9BXM0 1461 aa9.34□□□□□ -0.91
AFP-201ENST00000226359 UGGT2Q9NYU1 1516 aa9.33□□□□□ -0.92
AFP-201ENST00000226359 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
AFP-201ENST00000226359 RNF25Q96BH1 459 aaPredicted RBP9.32□□□□□ -0.92
AFP-201ENST00000226359 TSHZ2Q9NRE2 1034 aa9.31□□□□□ -0.92
AFP-201ENST00000226359 GSE1Q14687 1217 aa9.31□□□□□ -0.92
AFP-201ENST00000226359 MS4A3Q96HJ5 214 aa9.31□□□□□ -0.92
AFP-201ENST00000226359 TIMELESSQ9UNS1 1208 aa9.31□□□□□ -0.92
AFP-201ENST00000226359 FAM212AQ96EL1 285 aa9.3□□□□□ -0.92
AFP-201ENST00000226359 UACAQ9BZF9 1416 aa9.29□□□□□ -0.92
AFP-201ENST00000226359 KIAA0556O60303 1618 aa9.29□□□□□ -0.92
AFP-201ENST00000226359 CTTNBP2Q8WZ74 1663 aa9.29□□□□□ -0.92
AFP-201ENST00000226359 DISP1Q96F81 1524 aa9.29□□□□□ -0.92
AFP-201ENST00000226359 ADCY10Q96PN6 1610 aa9.28□□□□□ -0.92
AFP-201ENST00000226359 MAPKBP1O60336 1514 aa9.28□□□□□ -0.92
AFP-201ENST00000226359 ABCC2Q92887 1545 aa9.28□□□□□ -0.92
AFP-201ENST00000226359 UHRF1BP1LA0JNW5 1464 aa9.27□□□□□ -0.92
AFP-201ENST00000226359 FAM69CQ0P6D2 419 aa9.27□□□□□ -0.93
AFP-201ENST00000226359 ABCC10Q5T3U5 1492 aa9.26□□□□□ -0.93
AFP-201ENST00000226359 PLB1Q6P1J6 1458 aa9.26□□□□□ -0.93
AFP-201ENST00000226359 TULP1O00294 542 aaPredicted RBP9.25□□□□□ -0.93
AFP-201ENST00000226359 ST18O60284 1047 aa9.25□□□□□ -0.93
AFP-201ENST00000226359 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
AFP-201ENST00000226359 ATN1P54259 1190 aaPredicted RBP9.23□□□□□ -0.93
AFP-201ENST00000226359 KIF21BO75037 1637 aa9.23□□□□□ -0.93
AFP-201ENST00000226359 PYGBP11216 843 aa9.23□□□□□ -0.93
AFP-201ENST00000226359 TMEM121BQ9BXQ6 578 aaPredicted RBP9.23□□□□□ -0.93
AFP-201ENST00000226359 ASXL2Q76L83 1435 aa9.22□□□□□ -0.93
AFP-201ENST00000226359 UBTFP17480 764 aaKnown RBP9.21□□□□□ -0.93
AFP-201ENST00000226359 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.93
AFP-201ENST00000226359 DIP2BQ9P265 1576 aa9.21□□□□□ -0.93
AFP-201ENST00000226359 TSPYL2Q9H2G4 693 aaPredicted RBP9.21□□□□□ -0.94
AFP-201ENST00000226359 KDM5BQ9UGL1 1544 aa9.2□□□□□ -0.94
AFP-201ENST00000226359 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
AFP-201ENST00000226359 P3H3Q8IVL6 736 aa9.2□□□□□ -0.94
AFP-201ENST00000226359 EFCAB5A4FU69 1503 aa9.19□□□□□ -0.94
AFP-201ENST00000226359 POTEFA5A3E0 1075 aa9.19□□□□□ -0.94
AFP-201ENST00000226359 RIOK3O14730 519 aaKnown RBP9.18□□□□□ -0.94
AFP-201ENST00000226359 ABCA8O94911 1581 aa9.18□□□□□ -0.94
AFP-201ENST00000226359 WDR7Q9Y4E6 1490 aa9.18□□□□□ -0.94
AFP-201ENST00000226359 SAMD9Q5K651 1589 aa9.17□□□□□ -0.94
AFP-201ENST00000226359 ZCCHC11Q5TAX3 1644 aaKnown RBP9.17□□□□□ -0.94
AFP-201ENST00000226359 TEX14Q8IWB6 1497 aa9.17□□□□□ -0.94
AFP-201ENST00000226359 GLI2P10070 1586 aa9.16□□□□□ -0.94
AFP-201ENST00000226359 KIF13AQ9H1H9 1805 aa9.16□□□□□ -0.94
AFP-201ENST00000226359 SEC24BO95487 1268 aa9.16□□□□□ -0.94
AFP-201ENST00000226359 EPRSP07814 1512 aaKnown RBP9.16□□□□□ -0.94
AFP-201ENST00000226359 FHOD3Q2V2M9 1422 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms