RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 KCNH8Q96L42 1107 aa12.76□□□□□ -0.37
MTHFD1-201ENST00000216605 CHD1O14646 1710 aa12.76□□□□□ -0.37
MTHFD1-201ENST00000216605 TROQ12816 1431 aaPredicted RBP12.76□□□□□ -0.37
MTHFD1-201ENST00000216605 MIA2Q96PC5 1412 aa12.74□□□□□ -0.37
MTHFD1-201ENST00000216605 HFM1A2PYH4 1435 aa12.73□□□□□ -0.37
MTHFD1-201ENST00000216605 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
MTHFD1-201ENST00000216605 NAIPQ13075 1403 aa12.71□□□□□ -0.37
MTHFD1-201ENST00000216605 ARHGEF11O15085 1522 aa12.71□□□□□ -0.37
MTHFD1-201ENST00000216605 ATP10BO94823 1461 aa12.71□□□□□ -0.38
MTHFD1-201ENST00000216605 ARXQ96QS3 562 aa12.7□□□□□ -0.38
MTHFD1-201ENST00000216605 ANP32EQ9BTT0 268 aa12.7□□□□□ -0.38
MTHFD1-201ENST00000216605 TONSLQ96HA7 1378 aa12.7□□□□□ -0.38
MTHFD1-201ENST00000216605 TSPY4P0CV99 314 aa12.69□□□□□ -0.38
MTHFD1-201ENST00000216605 TSPY10P0CW01 314 aa12.69□□□□□ -0.38
MTHFD1-201ENST00000216605 UACAQ9BZF9 1416 aa12.69□□□□□ -0.38
MTHFD1-201ENST00000216605 TCOF1Q13428 1488 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-201ENST00000216605 MAPKBP1O60336 1514 aa12.68□□□□□ -0.38
MTHFD1-201ENST00000216605 HNRNPMP52272 730 aaKnown RBP eCLIP12.67□□□□□ -0.38
MTHFD1-201ENST00000216605 FOXD1Q16676 465 aa12.67□□□□□ -0.38
MTHFD1-201ENST00000216605 DAPK1P53355 1430 aa12.67□□□□□ -0.38
MTHFD1-201ENST00000216605 ABCA8O94911 1581 aa12.66□□□□□ -0.38
MTHFD1-201ENST00000216605 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-201ENST00000216605 GPATCH8Q9UKJ3 1502 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-201ENST00000216605 KIF14Q15058 1648 aa12.65□□□□□ -0.38
MTHFD1-201ENST00000216605 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
MTHFD1-201ENST00000216605 ABCC5O15440 1437 aa12.65□□□□□ -0.39
MTHFD1-201ENST00000216605 YTHDC1Q96MU7 727 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-201ENST00000216605 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
MTHFD1-201ENST00000216605 CAMSAP2Q08AD1 1489 aa12.64□□□□□ -0.39
MTHFD1-201ENST00000216605 HIRIP3Q9BW71 556 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-201ENST00000216605 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
MTHFD1-201ENST00000216605 MIER1Q8N108 512 aa12.62□□□□□ -0.39
MTHFD1-201ENST00000216605 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
MTHFD1-201ENST00000216605 ANKRD30AQ9BXX3 1397 aa12.61□□□□□ -0.39
MTHFD1-201ENST00000216605 PPP1R15AO75807 674 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-201ENST00000216605 ITSN2Q9NZM3 1697 aa12.59□□□□□ -0.39
MTHFD1-201ENST00000216605 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
MTHFD1-201ENST00000216605 ROCK1Q13464 1354 aa12.58□□□□□ -0.4
MTHFD1-201ENST00000216605 AKNAQ7Z591 1439 aa12.57□□□□□ -0.4
MTHFD1-201ENST00000216605 DNMT1P26358 1616 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-201ENST00000216605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.43e-6■■■□□ 14.6
MTHFD1-201ENST00000216605 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
MTHFD1-201ENST00000216605 ABCC2Q92887 1545 aa12.55□□□□□ -0.4
MTHFD1-201ENST00000216605 KDM6BO15054 1643 aa12.55□□□□□ -0.4
MTHFD1-201ENST00000216605 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
MTHFD1-201ENST00000216605 ARHGAP5Q13017 1502 aa12.55□□□□□ -0.4
MTHFD1-201ENST00000216605 NCOA1Q15788 1441 aa12.55□□□□□ -0.4
MTHFD1-201ENST00000216605 ABCC10Q5T3U5 1492 aa12.54□□□□□ -0.4
MTHFD1-201ENST00000216605 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-201ENST00000216605 EFCAB2Q5VUJ9 269 aa12.54□□□□□ -0.4
MTHFD1-201ENST00000216605 ADCY10Q96PN6 1610 aa12.54□□□□□ -0.4
MTHFD1-201ENST00000216605 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
MTHFD1-201ENST00000216605 DDX10Q13206 875 aaKnown RBP12.53□□□□□ -0.4
MTHFD1-201ENST00000216605 PKD2Q13563 968 aa12.53□□□□□ -0.4
MTHFD1-201ENST00000216605 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
MTHFD1-201ENST00000216605 NUP155O75694 1391 aa12.53□□□□□ -0.4
MTHFD1-201ENST00000216605 GCC2Q8IWJ2 1684 aa12.53□□□□□ -0.4
MTHFD1-201ENST00000216605 ANKRD50Q9ULJ7 1429 aa12.53□□□□□ -0.4
MTHFD1-201ENST00000216605 RSPH4AQ5TD94 716 aa12.52□□□□□ -0.4
MTHFD1-201ENST00000216605 KIF15Q9NS87 1388 aa12.52□□□□□ -0.41
MTHFD1-201ENST00000216605 CDC42BPAQ5VT25 1732 aa12.51□□□□□ -0.41
MTHFD1-201ENST00000216605 L3MBTL2Q969R5 705 aa12.51□□□□□ -0.41
MTHFD1-201ENST00000216605 AEBP2Q6ZN18 517 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-201ENST00000216605 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
MTHFD1-201ENST00000216605 CCDC141Q6ZP82 1450 aa12.47□□□□□ -0.41
MTHFD1-201ENST00000216605 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
MTHFD1-201ENST00000216605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.47□□□□□ -0.41
MTHFD1-201ENST00000216605 TTC37Q6PGP7 1564 aa12.46□□□□□ -0.42
MTHFD1-201ENST00000216605 ZCCHC11Q5TAX3 1644 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-201ENST00000216605 SYCP2Q9BX26 1530 aa12.45□□□□□ -0.42
MTHFD1-201ENST00000216605 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
MTHFD1-201ENST00000216605 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
MTHFD1-201ENST00000216605 ANKRD30BQ9BXX2 1392 aa12.44□□□□□ -0.42
MTHFD1-201ENST00000216605 KDM5BQ9UGL1 1544 aa12.44□□□□□ -0.42
MTHFD1-201ENST00000216605 UHRF1BP1LA0JNW5 1464 aa12.44□□□□□ -0.42
MTHFD1-201ENST00000216605 ADGRL2O95490 1459 aa12.44□□□□□ -0.42
MTHFD1-201ENST00000216605 ADGBQ8N7X0 1667 aa12.44□□□□□ -0.42
MTHFD1-201ENST00000216605 SPAG9O60271 1321 aaKnown RBP12.43□□□□□ -0.42
MTHFD1-201ENST00000216605 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
MTHFD1-201ENST00000216605 EIF4G2P78344 907 aaKnown RBP eCLIP12.43□□□□□ -0.42
MTHFD1-201ENST00000216605 MBD5Q9P267 1494 aa12.43□□□□□ -0.42
MTHFD1-201ENST00000216605 TPRNQ4KMQ1 711 aa12.43□□□□□ -0.42
MTHFD1-201ENST00000216605 PLCH2O75038 1416 aa12.43□□□□□ -0.42
MTHFD1-201ENST00000216605 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
MTHFD1-201ENST00000216605 CDC42BPBQ9Y5S2 1711 aa12.42□□□□□ -0.42
MTHFD1-201ENST00000216605 PREX2Q70Z35 1606 aa12.42□□□□□ -0.42
MTHFD1-201ENST00000216605 POLR3GLQ9BT43 218 aa12.42□□□□□ -0.42
MTHFD1-201ENST00000216605 CYB5RLQ6IPT4 315 aa12.42□□□□□ -0.42
MTHFD1-201ENST00000216605 PLEKHH2Q8IVE3 1493 aa12.42□□□□□ -0.42
MTHFD1-201ENST00000216605 SHANK2Q9UPX8 1470 aa12.42□□□□□ -0.42
MTHFD1-201ENST00000216605 KIAA1107Q9UPP5 1409 aa12.41□□□□□ -0.42
MTHFD1-201ENST00000216605 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-201ENST00000216605 PZPP20742 1482 aa12.4□□□□□ -0.42
MTHFD1-201ENST00000216605 MYO5CQ9NQX4 1742 aa12.4□□□□□ -0.42
MTHFD1-201ENST00000216605 RGL3Q3MIN7 710 aa12.4□□□□□ -0.42
MTHFD1-201ENST00000216605 HOMEZQ8IX15 550 aa12.4□□□□□ -0.42
MTHFD1-201ENST00000216605 CROCC2H7BZ55 1655 aa12.4□□□□□ -0.42
MTHFD1-201ENST00000216605 WDR7Q9Y4E6 1490 aa12.4□□□□□ -0.42
MTHFD1-201ENST00000216605 ANP32CO43423 234 aa12.39□□□□□ -0.43
MTHFD1-201ENST00000216605 ASXL2Q76L83 1435 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms