RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 TARBP1Q13395 1621 aaKnown RBP27.95■■■□□ 2.07
RCN1-201ENST00000054950 CNGB1Q14028 1251 aaPredicted RBP27.94■■■□□ 2.06
RCN1-201ENST00000054950 ZNF644Q9H582 1327 aaPredicted RBP27.93■■■□□ 2.06
RCN1-201ENST00000054950 IQGAP2Q13576 1575 aa27.93■■■□□ 2.06
RCN1-201ENST00000054950 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
RCN1-201ENST00000054950 MIA2Q96PC5 1412 aa27.91■■■□□ 2.06
RCN1-201ENST00000054950 WDR62O43379 1518 aa27.9■■■□□ 2.06
RCN1-201ENST00000054950 PBRM1Q86U86 1689 aa27.9■■■□□ 2.06
RCN1-201ENST00000054950 ANKRD30BQ9BXX2 1392 aa27.9■■■□□ 2.06
RCN1-201ENST00000054950 KIF7Q2M1P5 1343 aa27.88■■■□□ 2.05
RCN1-201ENST00000054950 B4GALNT3Q6L9W6 998 aa27.88■■■□□ 2.05
RCN1-201ENST00000054950 BCL11AQ9H165 835 aa27.88■■■□□ 2.05
RCN1-201ENST00000054950 DAPK1P53355 1430 aa27.87■■■□□ 2.05
RCN1-201ENST00000054950 TEX14Q8IWB6 1497 aa27.87■■■□□ 2.05
RCN1-201ENST00000054950 RPRD2Q5VT52 1461 aaKnown RBP27.86■■■□□ 2.05
RCN1-201ENST00000054950 PPP4R2Q9NY27 417 aa27.86■■■□□ 2.05
RCN1-201ENST00000054950 SLC4A1APQ9BWU0 796 aaKnown RBP27.85■■■□□ 2.05
RCN1-201ENST00000054950 FANCIQ9NVI1 1328 aa27.84■■■□□ 2.05
RCN1-201ENST00000054950 ABCC5O15440 1437 aa27.83■■■□□ 2.05
RCN1-201ENST00000054950 SENP3-EIF4A1A0A087X0R7 540 aa27.81■■■□□ 2.04
RCN1-201ENST00000054950 ZBED9Q6R2W3 1325 aa27.81■■■□□ 2.04
RCN1-201ENST00000054950 ADAMTS12P58397 1594 aa27.81■■■□□ 2.04
RCN1-201ENST00000054950 POLR3GLQ9BT43 218 aa27.79■■■□□ 2.04
RCN1-201ENST00000054950 SPATA31E1Q6ZUB1 1445 aa27.79■■■□□ 2.04
RCN1-201ENST00000054950 DNMT1P26358 1616 aaKnown RBP27.76■■■□□ 2.03
RCN1-201ENST00000054950 ZNF326Q5BKZ1 582 aaKnown RBP27.75■■■□□ 2.03
RCN1-201ENST00000054950 ROCK1Q13464 1354 aa27.75■■■□□ 2.03
RCN1-201ENST00000054950 ERICH6BQ5W0A0 696 aa27.74■■■□□ 2.03
RCN1-201ENST00000054950 ERICH6Q7L0X2 663 aa27.73■■■□□ 2.03
RCN1-201ENST00000054950 POLR1AO95602 1720 aaPredicted RBP27.69■■■□□ 2.02
RCN1-201ENST00000054950 NUP153P49790 1475 aaKnown RBP27.69■■■□□ 2.02
RCN1-201ENST00000054950 PZPP20742 1482 aa27.67■■■□□ 2.02
RCN1-201ENST00000054950 DISP1Q96F81 1524 aa27.65■■■□□ 2.02
RCN1-201ENST00000054950 BCORL1Q5H9F3 1711 aa27.65■■■□□ 2.02
RCN1-201ENST00000054950 ZNF608Q9ULD9 1512 aaPredicted RBP27.65■■■□□ 2.02
RCN1-201ENST00000054950 DHX29Q7Z478 1369 aaKnown RBP27.64■■■□□ 2.02
RCN1-201ENST00000054950 ZNF777Q9ULD5 760 aaPredicted RBP27.64■■■□□ 2.02
RCN1-201ENST00000054950 KIAA0556O60303 1618 aa27.64■■■□□ 2.01
RCN1-201ENST00000054950 PRG4Q92954 1404 aaPredicted RBP27.63■■■□□ 2.01
RCN1-201ENST00000054950 USP47Q96K76 1375 aa27.61■■■□□ 2.01
RCN1-201ENST00000054950 RAPGEF6Q8TEU7 1601 aa27.59■■■□□ 2.01
RCN1-201ENST00000054950 CAMSAP2Q08AD1 1489 aa27.59■■■□□ 2.01
RCN1-201ENST00000054950 CFDP1Q9UEE9 299 aaPredicted RBP27.58■■■□□ 2.01
RCN1-201ENST00000054950 PKD2Q13563 968 aa27.56■■■□□ 2
RCN1-201ENST00000054950 MBD5Q9P267 1494 aa27.56■■■□□ 2
RCN1-201ENST00000054950 SMG6Q86US8 1419 aaKnown RBP27.53■■■□□ 2
RCN1-201ENST00000054950 KIAA0586Q9BVV6 1533 aa27.53■■■□□ 2
RCN1-201ENST00000054950 KIAA1107Q9UPP5 1409 aa27.52■■■□□ 2
RCN1-201ENST00000054950 NUDCQ9Y266 331 aa27.52■■■□□ 2
RCN1-201ENST00000054950 MRC2Q9UBG0 1479 aa27.51■■□□□ 1.99
RCN1-201ENST00000054950 KIF14Q15058 1648 aa27.51■■□□□ 1.99
RCN1-201ENST00000054950 PLB1Q6P1J6 1458 aa27.49■■□□□ 1.99
RCN1-201ENST00000054950 TROQ12816 1431 aaPredicted RBP27.49■■□□□ 1.99
RCN1-201ENST00000054950 KDM5CP41229 1560 aa27.48■■□□□ 1.99
RCN1-201ENST00000054950 GPATCH8Q9UKJ3 1502 aaKnown RBP27.48■■□□□ 1.99
RCN1-201ENST00000054950 ADGBQ8N7X0 1667 aa27.47■■□□□ 1.99
RCN1-201ENST00000054950 CCDC136Q96JN2 1154 aa27.44■■□□□ 1.98
RCN1-201ENST00000054950 PNISRQ8TF01 805 aaKnown RBP27.43■■□□□ 1.98
RCN1-201ENST00000054950 KDM2AQ9Y2K7 1162 aa27.43■■□□□ 1.98
RCN1-201ENST00000054950 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
RCN1-201ENST00000054950 PAK3O75914 559 aaPredicted RBP27.42■■□□□ 1.98
RCN1-201ENST00000054950 TMC1Q8TDI8 760 aa27.42■■□□□ 1.98
RCN1-201ENST00000054950 ITSN2Q9NZM3 1697 aa27.41■■□□□ 1.98
RCN1-201ENST00000054950 CARD11Q9BXL7 1154 aa27.41■■□□□ 1.98
RCN1-201ENST00000054950 CROCC2H7BZ55 1655 aa27.4■■□□□ 1.98
RCN1-201ENST00000054950 RNF123Q5XPI4 1314 aa27.4■■□□□ 1.98
RCN1-201ENST00000054950 ANKRD50Q9ULJ7 1429 aa27.39■■□□□ 1.98
RCN1-201ENST00000054950 ADGRL2O95490 1459 aa27.38■■□□□ 1.97
RCN1-201ENST00000054950 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
RCN1-201ENST00000054950 ANKRD30AQ9BXX3 1397 aa27.38■■□□□ 1.97
RCN1-201ENST00000054950 NOP58Q9Y2X3 529 aaKnown RBP27.37■■□□□ 1.97
RCN1-201ENST00000054950 NUP155O75694 1391 aa27.36■■□□□ 1.97
RCN1-201ENST00000054950 ST20-MTHFSA0A0A6YYL1 179 aa27.36■■□□□ 1.97
RCN1-201ENST00000054950 NBR1Q14596 966 aa27.35■■□□□ 1.97
RCN1-201ENST00000054950 RALGAPBQ86X10 1494 aa27.33■■□□□ 1.97
RCN1-201ENST00000054950 FBLN2P98095 1184 aa27.33■■□□□ 1.97
RCN1-201ENST00000054950 EIF4G3O43432 1585 aaKnown RBP27.33■■□□□ 1.97
RCN1-201ENST00000054950 SALL2Q9Y467 1007 aaPredicted RBP27.33■■□□□ 1.97
RCN1-201ENST00000054950 DCAF11Q8TEB1 546 aa27.3■■□□□ 1.96
RCN1-201ENST00000054950 UHRF1BP1Q6BDS2 1440 aa27.29■■□□□ 1.96
RCN1-201ENST00000054950 ARID4BQ4LE39 1312 aaPredicted RBP27.29■■□□□ 1.96
RCN1-201ENST00000054950 CEP170Q5SW79 1584 aa27.28■■□□□ 1.96
RCN1-201ENST00000054950 ADCY10Q96PN6 1610 aa27.28■■□□□ 1.96
RCN1-201ENST00000054950 CHMP7Q8WUX9 453 aaPredicted RBP27.28■■□□□ 1.96
RCN1-201ENST00000054950 KIF15Q9NS87 1388 aa27.28■■□□□ 1.96
RCN1-201ENST00000054950 DEKP35659 375 aaKnown RBP27.27■■□□□ 1.96
RCN1-201ENST00000054950 C9orf84Q5VXU9 1444 aa27.26■■□□□ 1.96
RCN1-201ENST00000054950 CDC42BPAQ5VT25 1732 aa27.26■■□□□ 1.95
RCN1-201ENST00000054950 ROCK2O75116 1388 aaKnown RBP27.26■■□□□ 1.95
RCN1-201ENST00000054950 LRPPRCP42704 1394 aaKnown RBP27.23■■□□□ 1.95
RCN1-201ENST00000054950 MYBBP1AQ9BQG0 1328 aaKnown RBP27.22■■□□□ 1.95
RCN1-201ENST00000054950 HNRNPMP52272 730 aaKnown RBP eCLIP27.22■■□□□ 1.95
RCN1-201ENST00000054950 EXOC6Q8TAG9 804 aa27.2■■□□□ 1.94
RCN1-201ENST00000054950 PLEKHD1A6NEE1 506 aa27.19■■□□□ 1.94
RCN1-201ENST00000054950 ANP32AP39687 249 aaKnown RBP27.18■■□□□ 1.94
RCN1-201ENST00000054950 JPH4Q96JJ6 628 aa27.18■■□□□ 1.94
RCN1-201ENST00000054950 ARHGEF12Q9NZN5 1544 aa27.18■■□□□ 1.94
RCN1-201ENST00000054950 BRD4O60885 1362 aaPredicted RBP27.18■■□□□ 1.94
RCN1-201ENST00000054950 RRP1P56182 461 aaKnown RBP27.17■■□□□ 1.94
RCN1-201ENST00000054950 TSPY4P0CV99 314 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms