RNA–Protein interactions for RNA: ENST00000022615.8

VDAC3-201, Transcript of voltage dependent anion channel 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VDAC3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-201ENST00000022615 POTEAQ6S8J7 498 aa10.41□□□□□ -0.74
VDAC3-201ENST00000022615 PIP4K2BP78356 416 aa10.4□□□□□ -0.74
VDAC3-201ENST00000022615 KCNH8Q96L42 1107 aa10.4□□□□□ -0.74
VDAC3-201ENST00000022615 SETD1BQ9UPS6 1966 aaKnown RBP10.4□□□□□ -0.74
VDAC3-201ENST00000022615 CEBPAP49715 358 aaPredicted RBP10.39□□□□□ -0.75
VDAC3-201ENST00000022615 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
VDAC3-201ENST00000022615 ARHGEF12Q9NZN5 1544 aa10.38□□□□□ -0.75
VDAC3-201ENST00000022615 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
VDAC3-201ENST00000022615 DISP1Q96F81 1524 aa10.37□□□□□ -0.75
VDAC3-201ENST00000022615 NEO1Q92859 1461 aa10.37□□□□□ -0.75
VDAC3-201ENST00000022615 UPF1Q92900 1129 aaKnown RBP eCLIP10.37□□□□□ -0.75
VDAC3-201ENST00000022615 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
VDAC3-201ENST00000022615 MLECQ14165 292 aa10.35□□□□□ -0.75
VDAC3-201ENST00000022615 AKNAQ7Z591 1439 aa10.35□□□□□ -0.75
VDAC3-201ENST00000022615 ALKQ9UM73 1620 aa10.35□□□□□ -0.75
VDAC3-201ENST00000022615 TOM1O60784 492 aa10.34□□□□□ -0.75
VDAC3-201ENST00000022615 KIAA0556O60303 1618 aa10.34□□□□□ -0.75
VDAC3-201ENST00000022615 BIVM-ERCC5R4GMW8 1640 aa10.34□□□□□ -0.75
VDAC3-201ENST00000022615 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
VDAC3-201ENST00000022615 ABCA9Q8IUA7 1624 aa10.32□□□□□ -0.76
VDAC3-201ENST00000022615 HOXD11P31277 338 aaPredicted RBP10.31□□□□□ -0.76
VDAC3-201ENST00000022615 FHOD3Q2V2M9 1422 aa10.3□□□□□ -0.76
VDAC3-201ENST00000022615 ZMYM4Q5VZL5 1548 aa10.3□□□□□ -0.76
VDAC3-201ENST00000022615 IQGAP2Q13576 1575 aa10.29□□□□□ -0.76
VDAC3-201ENST00000022615 ZFYVE16Q7Z3T8 1539 aa10.29□□□□□ -0.76
VDAC3-201ENST00000022615 CAMSAP1Q5T5Y3 1602 aa10.29□□□□□ -0.76
VDAC3-201ENST00000022615 DENND4BO75064 1496 aaPredicted RBP10.27□□□□□ -0.77
VDAC3-201ENST00000022615 EFCAB5A4FU69 1503 aa10.26□□□□□ -0.77
VDAC3-201ENST00000022615 NCKAP5LQ9HCH0 1330 aa10.26□□□□□ -0.77
VDAC3-201ENST00000022615 C3P01024 1663 aa10.24□□□□□ -0.77
VDAC3-201ENST00000022615 IGF1RP08069 1367 aa10.24□□□□□ -0.77
VDAC3-201ENST00000022615 MAGI2Q86UL8 1455 aa10.24□□□□□ -0.77
VDAC3-201ENST00000022615 ABCA8O94911 1581 aa10.23□□□□□ -0.77
VDAC3-201ENST00000022615 PTPRKQ15262 1439 aa10.23□□□□□ -0.77
VDAC3-201ENST00000022615 CPS1P31327 1500 aa10.23□□□□□ -0.77
VDAC3-201ENST00000022615 TRAPPC8Q9Y2L5 1435 aa10.22□□□□□ -0.77
VDAC3-201ENST00000022615 UGGT2Q9NYU1 1516 aa10.22□□□□□ -0.77
VDAC3-201ENST00000022615 TCOF1Q13428 1488 aaKnown RBP10.2□□□□□ -0.78
VDAC3-201ENST00000022615 PLA2R1Q13018 1463 aa10.2□□□□□ -0.78
VDAC3-201ENST00000022615 HECW1Q76N89 1606 aa10.19□□□□□ -0.78
VDAC3-201ENST00000022615 PKD2Q13563 968 aa10.18□□□□□ -0.78
VDAC3-201ENST00000022615 C9orf84Q5VXU9 1444 aa10.17□□□□□ -0.78
VDAC3-201ENST00000022615 ATP10AO60312 1499 aa10.17□□□□□ -0.78
VDAC3-201ENST00000022615 RAPGEF2Q9Y4G8 1499 aa10.16□□□□□ -0.78
VDAC3-201ENST00000022615 SHANK2Q9UPX8 1470 aa10.16□□□□□ -0.78
VDAC3-201ENST00000022615 SETBP1Q9Y6X0 1596 aa10.14□□□□□ -0.79
VDAC3-201ENST00000022615 ATP10BO94823 1461 aa10.12□□□□□ -0.79
VDAC3-201ENST00000022615 ZNF142P52746 1687 aaPredicted RBP10.11□□□□□ -0.79
VDAC3-201ENST00000022615 CARMIL1Q5VZK9 1371 aa10.11□□□□□ -0.79
VDAC3-201ENST00000022615 LRRC7Q96NW7 1537 aa10.11□□□□□ -0.79
VDAC3-201ENST00000022615 CFAP74Q9C0B2 1584 aa10.1□□□□□ -0.79
VDAC3-201ENST00000022615 RBM33Q96EV2 1170 aaKnown RBP10.1□□□□□ -0.79
VDAC3-201ENST00000022615 NPATQ14207 1427 aa10.1□□□□□ -0.79
VDAC3-201ENST00000022615 VWDEQ8N2E2 1590 aa10.1□□□□□ -0.79
VDAC3-201ENST00000022615 RNF17Q9BXT8 1623 aaKnown RBP10.08□□□□□ -0.8
VDAC3-201ENST00000022615 TRIM52Q96A61 297 aa10.08□□□□□ -0.8
VDAC3-201ENST00000022615 SLC4A2P04920 1241 aa10.07□□□□□ -0.8
VDAC3-201ENST00000022615 SUPT6HQ7KZ85 1726 aaKnown RBP10.07□□□□□ -0.8
VDAC3-201ENST00000022615 NEURL4Q96JN8 1562 aa10.06□□□□□ -0.8
VDAC3-201ENST00000022615 CEP170BQ9Y4F5 1589 aaPredicted RBP10.06□□□□□ -0.8
VDAC3-201ENST00000022615 MYO3AQ8NEV4 1616 aa10.05□□□□□ -0.8
VDAC3-201ENST00000022615 ARID3CA6NKF2 412 aa10.05□□□□□ -0.8
VDAC3-201ENST00000022615 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
VDAC3-201ENST00000022615 AGLP35573 1532 aa10.05□□□□□ -0.8
VDAC3-201ENST00000022615 KIF27Q86VH2 1401 aa10.05□□□□□ -0.8
VDAC3-201ENST00000022615 REREQ9P2R6 1566 aa10.04□□□□□ -0.8
VDAC3-201ENST00000022615 CDK12Q9NYV4 1490 aaPredicted RBP10.04□□□□□ -0.8
VDAC3-201ENST00000022615 CNTLNQ9NXG0 1405 aa10.03□□□□□ -0.8
VDAC3-201ENST00000022615 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.8
VDAC3-201ENST00000022615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.02□□□□□ -0.81
VDAC3-201ENST00000022615 SCAPERQ9BY12 1400 aa10.01□□□□□ -0.81
VDAC3-201ENST00000022615 POLR1AO95602 1720 aaPredicted RBP10.01□□□□□ -0.81
VDAC3-201ENST00000022615 STRCP1A6NGW2 1772 aa10.01□□□□□ -0.81
VDAC3-201ENST00000022615 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
VDAC3-201ENST00000022615 FKBP8Q14318 412 aa10.01□□□□□ -0.81
VDAC3-201ENST00000022615 LRP5O75197 1615 aa10□□□□□ -0.81
VDAC3-201ENST00000022615 DIP2CQ9Y2E4 1556 aa10□□□□□ -0.81
VDAC3-201ENST00000022615 FAM135BQ49AJ0 1406 aa10□□□□□ -0.81
VDAC3-201ENST00000022615 ESF1Q9H501 851 aaKnown RBP9.99□□□□□ -0.81
VDAC3-201ENST00000022615 SYNMO15061 1565 aa9.98□□□□□ -0.81
VDAC3-201ENST00000022615 GOLGA3Q08378 1498 aa9.98□□□□□ -0.81
VDAC3-201ENST00000022615 MYCNP04198 464 aaPredicted RBP9.98□□□□□ -0.81
VDAC3-201ENST00000022615 ZNF772Q68DY9 489 aaPredicted RBP9.97□□□□□ -0.81
VDAC3-201ENST00000022615 DNMT1P26358 1616 aaKnown RBP9.97□□□□□ -0.81
VDAC3-201ENST00000022615 RAPGEF6Q8TEU7 1601 aa9.96□□□□□ -0.81
VDAC3-201ENST00000022615 RXRBP28702 533 aa9.96□□□□□ -0.82
VDAC3-201ENST00000022615 ZMYM3Q14202 1370 aa9.96□□□□□ -0.82
VDAC3-201ENST00000022615 LRP6O75581 1613 aa9.95□□□□□ -0.82
VDAC3-201ENST00000022615 KDM5CP41229 1560 aa9.95□□□□□ -0.82
VDAC3-201ENST00000022615 A2ML1A8K2U0 1454 aa9.94□□□□□ -0.82
VDAC3-201ENST00000022615 ABCA6Q8N139 1617 aa9.94□□□□□ -0.82
VDAC3-201ENST00000022615 CDK13Q14004 1512 aaKnown RBP9.93□□□□□ -0.82
VDAC3-201ENST00000022615 EP400Q96L91 3159 aa9.93□□□□□ -0.82
VDAC3-201ENST00000022615 RGS12O14924 1447 aa9.92□□□□□ -0.82
VDAC3-201ENST00000022615 YY1P25490 414 aa9.92□□□□□ -0.82
VDAC3-201ENST00000022615 MED14O60244 1454 aa9.92□□□□□ -0.82
VDAC3-201ENST00000022615 JCADQ9P266 1359 aa9.91□□□□□ -0.82
VDAC3-201ENST00000022615 XIRP1Q702N8 1843 aaKnown RBP9.91□□□□□ -0.82
VDAC3-201ENST00000022615 ROBO1Q9Y6N7 1651 aa9.91□□□□□ -0.82
VDAC3-201ENST00000022615 ZNF518AQ6AHZ1 1483 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms