RNA–Protein interactions for RNA: ENSMUST00000173739.7

Apoe-205, Transcript of Apolipoprotein E, mouse

APPRIS P1 TSL 1 (best) BASIC

Gene Apoe, Length 1,221 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Apoe-205	ENSMUST00000173739	Abca9	Q8K449	1623 aa		32.55	■■■□□ 2.8
Apoe-205	ENSMUST00000173739	Magi1	Q6RHR9	1471 aa		32.54	■■■□□ 2.8
Apoe-205	ENSMUST00000173739	Mycl	P10166	368 aa		32.53	■■■□□ 2.8
Apoe-205	ENSMUST00000173739	Adamtsl3	G3UXC7	1706 aa		32.52	■■■□□ 2.8
Apoe-205	ENSMUST00000173739	Myt1l	P97500	1187 aa		32.51	■■■□□ 2.79
Apoe-205	ENSMUST00000173739	Prex2	Q3LAC4	1598 aa		32.5	■■■□□ 2.79
Apoe-205	ENSMUST00000173739	Camsap2	Q8C1B1	1461 aa		32.5	■■■□□ 2.79
Apoe-205	ENSMUST00000173739	Kif27	Q7M6Z4	1394 aa		32.5	■■■□□ 2.79
Apoe-205	ENSMUST00000173739	Kiaa0556	Q8C753	1610 aa		32.5	■■■□□ 2.79
Apoe-205	ENSMUST00000173739	Cep162	Q6ZQ06	1403 aa		32.47	■■■□□ 2.79
Apoe-205	ENSMUST00000173739	Ankrd26	Q811D2	1581 aa		32.47	■■■□□ 2.79
Apoe-205	ENSMUST00000173739	Aebp1	Q640N1	1128 aa		32.45	■■■□□ 2.79
Apoe-205	ENSMUST00000173739	Safb2	Q80YR5	991 aa	Known RBP	32.37	■■■□□ 2.77
Apoe-205	ENSMUST00000173739	Ahdc1	Q6PAL7	1594 aa	Known RBP	32.34	■■■□□ 2.77
Apoe-205	ENSMUST00000173739	Ncapd3	Q6ZQK0	1506 aa		32.34	■■■□□ 2.77
Apoe-205	ENSMUST00000173739	Npat	Q8BMA5	1420 aa		32.32	■■■□□ 2.76
Apoe-205	ENSMUST00000173739	Atp10a	O54827	1508 aa		32.31	■■■□□ 2.76
Apoe-205	ENSMUST00000173739	Yeats2	Q3TUF7	1407 aa		32.31	■■■□□ 2.76
Apoe-205	ENSMUST00000173739	Sphkap	Q6NSW3	1687 aa		32.3	■■■□□ 2.76
Apoe-205	ENSMUST00000173739	Cul9	Q80TT8	1865 aa		32.27	■■■□□ 2.76
Apoe-205	ENSMUST00000173739	Fam163a	Q8CAA5	168 aa		32.26	■■■□□ 2.75
Apoe-205	ENSMUST00000173739	Fam208a	Q69ZR9	1610 aa	Known RBP	32.26	■■■□□ 2.75
Apoe-205	ENSMUST00000173739	Ncoa3	O09000	1398 aa		32.25	■■■□□ 2.75
Apoe-205	ENSMUST00000173739	Ovos	Q3UU35	1456 aa		32.24	■■■□□ 2.75
Apoe-205	ENSMUST00000173739	Ptch1	Q61115	1434 aa		32.23	■■■□□ 2.75
Apoe-205	ENSMUST00000173739	Supt6h	Q62383	1726 aa	Known RBP	32.23	■■■□□ 2.75
Apoe-205	ENSMUST00000173739	Lemd3	Q9WU40	921 aa		32.2	■■■□□ 2.75
Apoe-205	ENSMUST00000173739	Erich3	F6QRE9	1637 aa		32.17	■■■□□ 2.74
Apoe-205	ENSMUST00000173739	Zmym4	A2A791	1549 aa	Known RBP	32.16	■■■□□ 2.74
Apoe-205	ENSMUST00000173739	Dip2c	E9PWR4	1557 aa		32.15	■■■□□ 2.74
Apoe-205	ENSMUST00000173739	Dhx57	Q6P5D3	1388 aa	Known RBP	32.15	■■■□□ 2.74
Apoe-205	ENSMUST00000173739	Arhgap5	P97393	1501 aa		32.12	■■■□□ 2.73
Apoe-205	ENSMUST00000173739	Mug1	P28665	1476 aa		32.12	■■■□□ 2.73
Apoe-205	ENSMUST00000173739	Rere	Q80TZ9	1558 aa		32.1	■■■□□ 2.73
Apoe-205	ENSMUST00000173739	Cdc42bpa	Q3UU96	1719 aa		32.07	■■■□□ 2.72
Apoe-205	ENSMUST00000173739	Kdm5c	P41230	1554 aa		32.07	■■■□□ 2.72
Apoe-205	ENSMUST00000173739	Kiaa1551	Q5DTW7	1521 aa		32.06	■■■□□ 2.72
Apoe-205	ENSMUST00000173739	Lmo7	E9PYF4	1699 aa	Known RBP	32.05	■■■□□ 2.72
Apoe-205	ENSMUST00000173739	Kidins220	E9Q9B7	1793 aa		32.04	■■■□□ 2.72
Apoe-205	ENSMUST00000173739	Cypt1	Q8CH20	168 aa		32.04	■■■□□ 2.72
Apoe-205	ENSMUST00000173739	Scn4a	Q9ER60	1841 aa		32.03	■■■□□ 2.72
Apoe-205	ENSMUST00000173739	Setd5	Q5XJV7	1441 aa		32.03	■■■□□ 2.72
Apoe-205	ENSMUST00000173739	Ap3b1	Q9Z1T1	1105 aa		32.02	■■■□□ 2.72
Apoe-205	ENSMUST00000173739	Ecm2	Q5FW85	670 aa		32.01	■■■□□ 2.71
Apoe-205	ENSMUST00000173739	Cfap65	Q3V0B4	1847 aa		31.98	■■■□□ 2.71
Apoe-205	ENSMUST00000173739	Pcf11	G3X9Z4	1553 aa		31.96	■■■□□ 2.71
Apoe-205	ENSMUST00000173739	Talpid3	E9PV87	1520 aa		31.93	■■■□□ 2.7
Apoe-205	ENSMUST00000173739	Abca6	Q8K441	1624 aa		31.9	■■■□□ 2.7
Apoe-205	ENSMUST00000173739	4930407I10Rik	D3Z5T8	1512 aa		31.9	■■■□□ 2.7
Apoe-205	ENSMUST00000173739	Dip2a	Q8BWT5	1523 aa		31.9	■■■□□ 2.7
Apoe-205	ENSMUST00000173739	Dennd4b	Q3U1Y4	1499 aa		31.87	■■■□□ 2.69
Apoe-205	ENSMUST00000173739	Trappc8	E9PWG2	1437 aa		31.85	■■■□□ 2.69
Apoe-205	ENSMUST00000173739	Pip4k2b	Q80XI4	416 aa		31.84	■■■□□ 2.69
Apoe-205	ENSMUST00000173739	Myom2	Q14BI5	1463 aa		31.84	■■■□□ 2.69
Apoe-205	ENSMUST00000173739	Topaz1	E5FYH1	1653 aa		31.8	■■■□□ 2.68
Apoe-205	ENSMUST00000173739	Arhgef40	Q3UPH7	1517 aa		31.77	■■■□□ 2.68
Apoe-205	ENSMUST00000173739	Afap1	Q80YS6	731 aa		31.77	■■■□□ 2.68
Apoe-205	ENSMUST00000173739	Eea1	Q8BL66	1411 aa		31.75	■■■□□ 2.67
Apoe-205	ENSMUST00000173739	Abcc3	B2RX12	1523 aa		31.75	■■■□□ 2.67
Apoe-205	ENSMUST00000173739	Dip2b	Q3UH60	1574 aa		31.73	■■■□□ 2.67
Apoe-205	ENSMUST00000173739	Gm32742	A0A1B0GT42	1604 aa		31.73	■■■□□ 2.67
Apoe-205	ENSMUST00000173739	Hecw1	Q8K4P8	1604 aa		31.72	■■■□□ 2.67
Apoe-205	ENSMUST00000173739	Tdrd9	Q14BI7	1383 aa		31.7	■■■□□ 2.67
Apoe-205	ENSMUST00000173739	Lmod2	Q3UHZ5	550 aa		31.69	■■■□□ 2.66
Apoe-205	ENSMUST00000173739	Pdcd11	Q6NS46	1862 aa	Known RBP	31.69	■■■□□ 2.66
Apoe-205	ENSMUST00000173739	Peg3	Q3URU2	1571 aa		31.68	■■■□□ 2.66
Apoe-205	ENSMUST00000173739	Cfap74	Q3UY96	1578 aa		31.68	■■■□□ 2.66
Apoe-205	ENSMUST00000173739	Nexmif	Q5DTT1	1515 aa		31.68	■■■□□ 2.66
Apoe-205	ENSMUST00000173739	Gapdhs	Q64467	440 aa		31.65	■■■□□ 2.66
Apoe-205	ENSMUST00000173739	Ltbp4	Q8K4G1	1666 aa		31.64	■■■□□ 2.65
Apoe-205	ENSMUST00000173739	Trpm1	Q2TV84	1622 aa		31.62	■■■□□ 2.65
Apoe-205	ENSMUST00000173739	Sart1	Q9Z315	806 aa	Known RBP	31.61	■■■□□ 2.65
Apoe-205	ENSMUST00000173739	Cntln	A2AM05	1397 aa		31.6	■■■□□ 2.65
Apoe-205	ENSMUST00000173739	Gm1043	A0A140LJC2	1431 aa		31.59	■■■□□ 2.65
Apoe-205	ENSMUST00000173739	Cdc42bpg	Q80UW5	1551 aa		31.59	■■■□□ 2.65
Apoe-205	ENSMUST00000173739	Hrc	G5E8J6	738 aa		31.58	■■■□□ 2.65
Apoe-205	ENSMUST00000173739	Tiam1	Q60610	1591 aa		31.58	■■■□□ 2.65
Apoe-205	ENSMUST00000173739	Trpm2	Q91YD4	1506 aa		31.56	■■■□□ 2.64
Apoe-205	ENSMUST00000173739	Cdc42bpb	Q7TT50	1713 aa		31.55	■■■□□ 2.64
Apoe-205	ENSMUST00000173739	Ncoa1	P70365	1447 aa		31.53	■■■□□ 2.64
Apoe-205	ENSMUST00000173739	Adcy10	Q8C0T9	1614 aa		31.5	■■■□□ 2.63
Apoe-205	ENSMUST00000173739	Cltc	Q68FD5	1675 aa	Known RBP	31.5	■■■□□ 2.63
Apoe-205	ENSMUST00000173739	Caskin1	Q6P9K8	1431 aa		31.48	■■■□□ 2.63
Apoe-205	ENSMUST00000173739	Map3k5	O35099	1380 aa		31.47	■■■□□ 2.63
Apoe-205	ENSMUST00000173739	Bcl9	Q9D219	1425 aa		31.47	■■■□□ 2.63
Apoe-205	ENSMUST00000173739	Gli2	Q0VGT2	1544 aa		31.44	■■■□□ 2.62
Apoe-205	ENSMUST00000173739	Fhod3	Q76LL6	1578 aa		31.43	■■■□□ 2.62
Apoe-205	ENSMUST00000173739	Rictor	Q6QI06	1708 aa		31.41	■■■□□ 2.62
Apoe-205	ENSMUST00000173739	Naip6	Q9JIB6	1403 aa		31.41	■■■□□ 2.62
Apoe-205	ENSMUST00000173739	Iqsec2	Q5DU25	1478 aa		31.4	■■■□□ 2.62
Apoe-205	ENSMUST00000173739	Knl1	Q66JQ7	1612 aa		31.39	■■■□□ 2.62
Apoe-205	ENSMUST00000173739	Hspa1l	P16627	641 aa		31.39	■■■□□ 2.62
Apoe-205	ENSMUST00000173739	Nos1	Q9Z0J4	1429 aa		31.37	■■■□□ 2.61
Apoe-205	ENSMUST00000173739	Phlpp1	Q8CHE4	1687 aa		31.34	■■■□□ 2.61
Apoe-205	ENSMUST00000173739	Gli3	Q61602	1583 aa		31.33	■■■□□ 2.61
Apoe-205	ENSMUST00000173739	Rimbp3	Q3V0F0	1606 aa		31.28	■■■□□ 2.6
Apoe-205	ENSMUST00000173739	Gm13697	A2AK42	830 aa		31.27	■■■□□ 2.6
Apoe-205	ENSMUST00000173739	Gphn	Q8BUV3	769 aa	Known RBP	31.25	■■■□□ 2.59
Apoe-205	ENSMUST00000173739	Naip1	Q9QWK5	1403 aa		31.24	■■■□□ 2.59
Apoe-205	ENSMUST00000173739	Gemin5	Q8BX17	1502 aa	Known RBP	31.23	■■■□□ 2.59

Retrieved 100 of 22,080 RNA–protein pairs in 102.6 ms