RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Ube2q2Q8K2Z8 378 aa8.89□□□□□ -0.99
Lig4-202ENSMUST00000170033 NrdcQ8BHG1 1161 aa8.88□□□□□ -0.99
Lig4-202ENSMUST00000170033 Aebp1Q640N1 1128 aa8.87□□□□□ -0.99
Lig4-202ENSMUST00000170033 Ift140E9PY46 1464 aa8.87□□□□□ -0.99
Lig4-202ENSMUST00000170033 Grin2aP35436 1464 aa8.87□□□□□ -0.99
Lig4-202ENSMUST00000170033 CadpsQ80TJ1 1355 aa8.86□□□□□ -0.99
Lig4-202ENSMUST00000170033 Tnnt3Q9QZ47 272 aa8.86□□□□□ -0.99
Lig4-202ENSMUST00000170033 Stra8P70278 393 aa8.85□□□□□ -0.99
Lig4-202ENSMUST00000170033 Pprc1Q6NZN1 1644 aa8.85□□□□□ -0.99
Lig4-202ENSMUST00000170033 Abca16E9PWJ7 1678 aa8.85□□□□□ -0.99
Lig4-202ENSMUST00000170033 Ppp6r1Q7TSI3 856 aa8.85□□□□□ -0.99
Lig4-202ENSMUST00000170033 Gm13697A2AK42 830 aa8.85□□□□□ -0.99
Lig4-202ENSMUST00000170033 A2mQ6GQT1 1474 aa8.85□□□□□ -0.99
Lig4-202ENSMUST00000170033 Rapgef6Q5NCJ1 1609 aa8.85□□□□□ -0.99
Lig4-202ENSMUST00000170033 WizO88286 1684 aaKnown RBP8.84□□□□□ -0.99
Lig4-202ENSMUST00000170033 Ncoa2Q61026 1462 aa8.83□□□□□ -1
Lig4-202ENSMUST00000170033 Nup160Q9Z0W3 1402 aaKnown RBP8.83□□□□□ -1
Lig4-202ENSMUST00000170033 DroshaQ5HZJ0 1373 aaKnown RBP8.83□□□□□ -1
Lig4-202ENSMUST00000170033 MyclP10166 368 aa8.83□□□□□ -1
Lig4-202ENSMUST00000170033 Cdc42bpaQ3UU96 1719 aa8.83□□□□□ -1
Lig4-202ENSMUST00000170033 Disp1Q3TDN0 1521 aa8.82□□□□□ -1
Lig4-202ENSMUST00000170033 Arhgef40Q3UPH7 1517 aa8.82□□□□□ -1
Lig4-202ENSMUST00000170033 Rad54l2Q99NG0 1466 aa8.81□□□□□ -1
Lig4-202ENSMUST00000170033 Naip5Q9R016 1403 aa8.81□□□□□ -1
Lig4-202ENSMUST00000170033 NexmifQ5DTT1 1515 aa8.8□□□□□ -1
Lig4-202ENSMUST00000170033 Dennd4bQ3U1Y4 1499 aa8.8□□□□□ -1
Lig4-202ENSMUST00000170033 Dhx57Q6P5D3 1388 aaKnown RBP8.8□□□□□ -1
Lig4-202ENSMUST00000170033 Kif27Q7M6Z4 1394 aa8.8□□□□□ -1
Lig4-202ENSMUST00000170033 Cc2d2bA0A286YDU8 1405 aa8.79□□□□□ -1
Lig4-202ENSMUST00000170033 Kiaa1551Q5DTW7 1521 aa8.79□□□□□ -1
Lig4-202ENSMUST00000170033 Plb1Q3TTY0 1478 aa8.79□□□□□ -1
Lig4-202ENSMUST00000170033 Znf326O88291 580 aa8.79□□□□□ -1
Lig4-202ENSMUST00000170033 Arhgef11Q68FM7 1552 aa8.79□□□□□ -1
Lig4-202ENSMUST00000170033 Ccnb3Q810T2 1396 aa8.78□□□□□ -1
Lig4-202ENSMUST00000170033 BC005561E9Q5E2 1589 aa8.78□□□□□ -1
Lig4-202ENSMUST00000170033 Neurl4Q5NCX5 1563 aa8.78□□□□□ -1
Lig4-202ENSMUST00000170033 Il16O54824 1322 aa8.77□□□□□ -1
Lig4-202ENSMUST00000170033 Arhgef12Q8R4H2 1543 aaKnown RBP8.77□□□□□ -1
Lig4-202ENSMUST00000170033 Rrbp1Q99PL5 1605 aaKnown RBP8.76□□□□□ -1.01
Lig4-202ENSMUST00000170033 Fbxo3Q9DC63 480 aa8.76□□□□□ -1.01
Lig4-202ENSMUST00000170033 Mug1P28665 1476 aa8.76□□□□□ -1.01
Lig4-202ENSMUST00000170033 Ap3b1Q9Z1T1 1105 aa8.76□□□□□ -1.01
Lig4-202ENSMUST00000170033 Gtf3c3Q3TMP1 882 aa8.75□□□□□ -1.01
Lig4-202ENSMUST00000170033 Mapkbp1Q6NS57 1503 aa8.75□□□□□ -1.01
Lig4-202ENSMUST00000170033 Caskin1Q6P9K8 1431 aa8.75□□□□□ -1.01
Lig4-202ENSMUST00000170033 Rprd2Q6NXI6 1469 aaKnown RBP8.75□□□□□ -1.01
Lig4-202ENSMUST00000170033 Plekhh2Q8C115 1491 aa8.74□□□□□ -1.01
Lig4-202ENSMUST00000170033 Map3k4O08648 1597 aa8.74□□□□□ -1.01
Lig4-202ENSMUST00000170033 Kdm3bQ6ZPY7 1562 aa8.74□□□□□ -1.01
Lig4-202ENSMUST00000170033 Kiaa1210E9Q0C6 1637 aa8.74□□□□□ -1.01
Lig4-202ENSMUST00000170033 Vgll3P85442 326 aa8.74□□□□□ -1.01
Lig4-202ENSMUST00000170033 Pik3c2gO70167 1506 aa8.73□□□□□ -1.01
Lig4-202ENSMUST00000170033 Pdcd11Q6NS46 1862 aaKnown RBP8.73□□□□□ -1.01
Lig4-202ENSMUST00000170033 Mlh3A0A1Y7VMP7 1443 aa8.73□□□□□ -1.01
Lig4-202ENSMUST00000170033 Hnrnpul2Q00PI9 745 aaKnown RBP8.73□□□□□ -1.01
Lig4-202ENSMUST00000170033 Abcc2Q8VI47 1543 aa8.73□□□□□ -1.01
Lig4-202ENSMUST00000170033 Adcy10Q8C0T9 1614 aa8.72□□□□□ -1.01
Lig4-202ENSMUST00000170033 Shroom2A2ALU4 1481 aa8.71□□□□□ -1.01
Lig4-202ENSMUST00000170033 Wdr7Q920I9 1489 aa8.71□□□□□ -1.01
Lig4-202ENSMUST00000170033 Fam163aQ8CAA5 168 aa8.71□□□□□ -1.01
Lig4-202ENSMUST00000170033 Trpm2Q91YD4 1506 aa8.71□□□□□ -1.02
Lig4-202ENSMUST00000170033 Lrriq1Q0P5X1 1673 aa8.71□□□□□ -1.02
Lig4-202ENSMUST00000170033 Mast1Q9R1L5 1570 aa8.71□□□□□ -1.02
Lig4-202ENSMUST00000170033 PxdnQ3UQ28 1475 aa8.7□□□□□ -1.02
Lig4-202ENSMUST00000170033 Abcc5Q9R1X5 1436 aa8.7□□□□□ -1.02
Lig4-202ENSMUST00000170033 Gtf3c6Q9D8P7 227 aa8.7□□□□□ -1.02
Lig4-202ENSMUST00000170033 Fmn2Q9JL04 1578 aa8.7□□□□□ -1.02
Lig4-202ENSMUST00000170033 Cers3Q1A3B0 383 aa8.7□□□□□ -1.02
Lig4-202ENSMUST00000170033 Tshz2Q68FE9 1030 aa8.7□□□□□ -1.02
Lig4-202ENSMUST00000170033 Fam50aQ9WV03 339 aaKnown RBP8.69□□□□□ -1.02
Lig4-202ENSMUST00000170033 Hecw1Q8K4P8 1604 aa8.69□□□□□ -1.02
Lig4-202ENSMUST00000170033 Dnmt1P13864 1620 aaKnown RBP8.69□□□□□ -1.02
Lig4-202ENSMUST00000170033 NclP09405 707 aaKnown RBP8.68□□□□□ -1.02
Lig4-202ENSMUST00000170033 Rbm10Q99KG3 930 aaKnown RBP8.68□□□□□ -1.02
Lig4-202ENSMUST00000170033 Rusc2Q80U22 1514 aa8.68□□□□□ -1.02
Lig4-202ENSMUST00000170033 Mbd5B1AYB6 1498 aa8.68□□□□□ -1.02
Lig4-202ENSMUST00000170033 Adgrl2Q8JZZ7 1487 aa8.68□□□□□ -1.02
Lig4-202ENSMUST00000170033 SphkapQ6NSW3 1687 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Smg6P61406 1418 aaKnown RBP8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Prex2Q3LAC4 1598 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Setd1aE9PYH6 1716 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Fam208aQ69ZR9 1610 aaKnown RBP8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Ccdc141E9Q8Q6 1531 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Ncoa1P70365 1447 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Ciz1Q8VEH2 845 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Rnf17Q99MV7 1640 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Magi1Q6RHR9 1471 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Ncoa3O09000 1398 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Ripply1Q2WG77 201 aa8.67□□□□□ -1.02
Lig4-202ENSMUST00000170033 Eif4g3Q80XI3 1579 aaKnown RBP8.66□□□□□ -1.02
Lig4-202ENSMUST00000170033 WrnO09053 1401 aa8.66□□□□□ -1.02
Lig4-202ENSMUST00000170033 AlkP97793 1621 aa8.66□□□□□ -1.02
Lig4-202ENSMUST00000170033 Nolc1E9Q5C9 702 aaKnown RBP8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 AcrbpQ3V140 540 aa8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 Cfap74Q3UY96 1578 aa8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 Zmym4A2A791 1549 aaKnown RBP8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 Mphosph9A6H5Y1 991 aa8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 Vsig10D3YX43 558 aa8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 Lmod2Q3UHZ5 550 aa8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 Eid3Q3V124 375 aa8.65□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms