RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 ChgaP26339 463 aaKnown RBP22.09■■□□□ 1.13
Ebf3-204ENSMUST00000169486 Map4P27546 1125 aaKnown RBP22.09■■□□□ 1.13
Ebf3-204ENSMUST00000169486 Baz1bQ9Z277 1479 aa22.08■■□□□ 1.13
Ebf3-204ENSMUST00000169486 Hsp90b1P08113 802 aaKnown RBP22.07■■□□□ 1.12
Ebf3-204ENSMUST00000169486 Safb2Q80YR5 991 aaKnown RBP22.06■■□□□ 1.12
Ebf3-204ENSMUST00000169486 Trak1Q6PD31 939 aa22.06■■□□□ 1.12
Ebf3-204ENSMUST00000169486 Cabp1Q9JLK7 227 aa22.05■■□□□ 1.12
Ebf3-204ENSMUST00000169486 Cecr2E9Q2Z1 1453 aa22.04■■□□□ 1.12
Ebf3-204ENSMUST00000169486 Aebp1Q640N1 1128 aa22.04■■□□□ 1.12
Ebf3-204ENSMUST00000169486 Ipo8Q7TMY7 1010 aa22.03■■□□□ 1.12
Ebf3-204ENSMUST00000169486 Cluap1Q8R3P7 413 aa22.02■■□□□ 1.12
Ebf3-204ENSMUST00000169486 Kif27Q7M6Z4 1394 aa22.02■■□□□ 1.12
Ebf3-204ENSMUST00000169486 Fhad1A6PWD2 1420 aa22.01■■□□□ 1.11
Ebf3-204ENSMUST00000169486 Ifit1bl1D3Z6F0 470 aa22.01■■□□□ 1.11
Ebf3-204ENSMUST00000169486 Smarca2Q6DIC0 1577 aa21.99■■□□□ 1.11
Ebf3-204ENSMUST00000169486 Atad2bE9Q166 1460 aaKnown RBP21.98■■□□□ 1.11
Ebf3-204ENSMUST00000169486 Ecm2Q5FW85 670 aa21.98■■□□□ 1.11
Ebf3-204ENSMUST00000169486 Fyco1Q8VDC1 1437 aa21.98■■□□□ 1.11
Ebf3-204ENSMUST00000169486 Tmf1B9EKI3 1091 aa21.98■■□□□ 1.11
Ebf3-204ENSMUST00000169486 Gtf3c3Q3TMP1 882 aa21.97■■□□□ 1.11
Ebf3-204ENSMUST00000169486 CrbnQ8C7D2 445 aa21.96■■□□□ 1.11
Ebf3-204ENSMUST00000169486 Iqcf3Q9D498 203 aa21.96■■□□□ 1.11
Ebf3-204ENSMUST00000169486 Mfap1aC0HKD8 439 aaKnown RBP21.95■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Mfap1bC0HKD9 439 aaKnown RBP21.95■■□□□ 1.1
Ebf3-204ENSMUST00000169486 NgefQ8CHT1 710 aa21.95■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Arhgap35Q91YM2 1499 aa21.94■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Tmco5bQ80X59 307 aa21.94■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Adam1bQ8R534 806 aa21.94■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Golga2Q921M4 999 aa21.93■■□□□ 1.1
Ebf3-204ENSMUST00000169486 CntlnA2AM05 1397 aa21.92■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Tnnt2P50752 301 aa21.92■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Phldb1Q6PDH0 1371 aaKnown RBP21.92■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Pes1Q9EQ61 584 aaKnown RBP21.92■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Smg6P61406 1418 aaKnown RBP21.92■■□□□ 1.1
Ebf3-204ENSMUST00000169486 U2af1Q9D883 239 aaKnown RBP21.92■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Cux2P70298 1426 aa21.92■■□□□ 1.1
Ebf3-204ENSMUST00000169486 HnrnpuQ8VEK3 800 aaKnown RBP21.9■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Znf330Q922H9 316 aa21.9■■□□□ 1.1
Ebf3-204ENSMUST00000169486 MccE9PWI3 1003 aa21.9■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Dcaf11Q91VU6 549 aa21.9■■□□□ 1.1
Ebf3-204ENSMUST00000169486 Rtn4Q99P72 1162 aaKnown RBP21.89■■□□□ 1.1
Ebf3-204ENSMUST00000169486 U2surpQ6NV83 1029 aaKnown RBP21.89■■□□□ 1.09
Ebf3-204ENSMUST00000169486 Gtf2e1Q9D0D5 440 aa21.89■■□□□ 1.09
Ebf3-204ENSMUST00000169486 Taok2Q6ZQ29 1240 aa21.88■■□□□ 1.09
Ebf3-204ENSMUST00000169486 PnnO35691 725 aaKnown RBP21.88■■□□□ 1.09
Ebf3-204ENSMUST00000169486 Pcmtd1P59913 357 aa21.88■■□□□ 1.09
Ebf3-204ENSMUST00000169486 GorabQ8BRM2 368 aa21.86■■□□□ 1.09
Ebf3-204ENSMUST00000169486 Plin1Q8CGN5 517 aa21.86■■□□□ 1.09
Ebf3-204ENSMUST00000169486 MsnP26041 577 aaKnown RBP21.85■■□□□ 1.09
Ebf3-204ENSMUST00000169486 SlkO54988 1233 aa21.84■■□□□ 1.09
Ebf3-204ENSMUST00000169486 Synj1Q8CHC4 1574 aa21.84■■□□□ 1.09
Ebf3-204ENSMUST00000169486 PtmsQ9D0J8 101 aaKnown RBP21.83■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Smarca4Q3TKT4 1613 aaKnown RBP21.82■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Znf316Q6PGE4 1016 aa21.82■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Rrp12Q6P5B0 1295 aaKnown RBP21.81■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Rapgef2Q8CHG7 1496 aa21.81■■□□□ 1.08
Ebf3-204ENSMUST00000169486 PrkcshO08795 521 aa21.79■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Ksr2Q3UVC0 959 aa21.79■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Srcin1Q9QWI6 1250 aa21.78■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Rock2P70336 1388 aa21.78■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Slc4a1apE9PX68 744 aa21.78■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Stk26Q99JT2 416 aa21.77■■□□□ 1.08
Ebf3-204ENSMUST00000169486 Senp3Q9EP97 568 aaKnown RBP21.76■■□□□ 1.07
Ebf3-204ENSMUST00000169486 Sh3bp5Q9Z131 463 aa21.75■■□□□ 1.07
Ebf3-204ENSMUST00000169486 Znf326O88291 580 aa21.74■■□□□ 1.07
Ebf3-204ENSMUST00000169486 Zfp777B9EKF4 885 aa21.74■■□□□ 1.07
Ebf3-204ENSMUST00000169486 Sart3Q9JLI8 962 aaKnown RBP21.73■■□□□ 1.07
Ebf3-204ENSMUST00000169486 Clstn1Q9EPL2 979 aa21.71■■□□□ 1.07
Ebf3-204ENSMUST00000169486 CgnP59242 1191 aa21.71■■□□□ 1.07
Ebf3-204ENSMUST00000169486 Rpap1Q80TE0 1409 aa21.71■■□□□ 1.07
Ebf3-204ENSMUST00000169486 Rassf8Q8CJ96 419 aa21.7■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Rtf1A2AQ19 715 aaKnown RBP21.69■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Birc3O08863 600 aa21.69■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Usp47Q8BY87 1376 aa21.69■■□□□ 1.06
Ebf3-204ENSMUST00000169486 AknaQ80VW7 1404 aa21.69■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Znf710Q3U288 666 aa21.68■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Ddrgk1Q80WW9 315 aa21.68■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Pank3Q8R2W9 370 aa21.68■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Gm973E9Q295 1059 aa21.68■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Nup155Q99P88 1391 aaKnown RBP21.68■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Ccar1Q8CH18 1146 aaKnown RBP21.67■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Mre11Q61216 706 aa21.67■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Cttnbp2B9EJA2 1648 aa21.65■■□□□ 1.06
Ebf3-204ENSMUST00000169486 Iffo2Q8R2V2 512 aa21.64■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Carmil1Q6EDY6 1374 aa21.64■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Ccnb3Q810T2 1396 aa21.63■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Eif2s2Q99L45 331 aaKnown RBP21.63■■□□□ 1.05
Ebf3-204ENSMUST00000169486 VgfQ0VGU4 617 aa21.63■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Inpp5dQ9ES52 1191 aa21.63■■□□□ 1.05
Ebf3-204ENSMUST00000169486 LrpprcQ6PB66 1392 aaKnown RBP21.62■■□□□ 1.05
Ebf3-204ENSMUST00000169486 4933402E13RikQ9D4D2 429 aa21.62■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Gpatch11Q3UFS4 262 aa21.62■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Q3TQI7 289 aaKnown RBP21.61■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Kiaa0754Q69ZZ9 979 aa21.61■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Anapc15P60007 132 aa21.6■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Esx1O88933 382 aa21.6■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Ccdc146E9Q9F7 977 aa21.59■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Ak7Q9D2H2 614 aa21.59■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Tnnt1O88346 262 aa21.58■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Rsph3aQ3UFY4 516 aa21.58■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms