RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 CntlnA2AM05 1397 aa23,35■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Dcaf11Q91VU6 549 aa23,35■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Iqcf3Q9D498 203 aa23,35■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Kif3bQ61771 747 aa23,34■■□□□ 1,33
Pkp4-210ENSMUST00000168631 NudcO35685 332 aaKnown RBP23,34■■□□□ 1,33
Pkp4-210ENSMUST00000168631 U2af1Q9D883 239 aaKnown RBP23,34■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Senp3Q9EP97 568 aaKnown RBP23,33■■□□□ 1,33
Pkp4-210ENSMUST00000168631 U2surpQ6NV83 1029 aaKnown RBP23,33■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Znf316Q6PGE4 1016 aa23,31■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Tmco5bQ80X59 307 aa23,3■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Birc3O08863 600 aa23,3■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Fhad1A6PWD2 1420 aa23,3■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Ccdc27Q3V036 639 aa23,29■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Srcin1Q9QWI6 1250 aa23,29■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Tmf1B9EKI3 1091 aa23,29■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Htatsf1Q8BGC0 757 aa23,28■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Mak16Q8BGS0 296 aaKnown RBP23,28■■□□□ 1,32
Pkp4-210ENSMUST00000168631 PtmaP26350 111 aa23,27■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Sart1Q9Z315 806 aaKnown RBP23,27■■□□□ 1,32
Pkp4-210ENSMUST00000168631 CatipB9EKE5 520 aa23,27■■□□□ 1,32
Pkp4-210ENSMUST00000168631 Tcerg1Q8CGF7 1100 aaKnown RBP23,26■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Arhgap35Q91YM2 1499 aa23,25■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Ccdc9Q8VC31 543 aaKnown RBP23,25■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Hsp90b1P08113 802 aaKnown RBP23,23■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Cluap1Q8R3P7 413 aa23,23■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Slc4a1apE9PX68 744 aa23,23■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Map7O88735 730 aa23,22■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Znf330Q922H9 316 aa23,22■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Nup155Q99P88 1391 aaKnown RBP23,21■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Ccnb3Q810T2 1396 aa23,21■■□□□ 1,31
Pkp4-210ENSMUST00000168631 CrbnQ8C7D2 445 aa23,21■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Carmil1Q6EDY6 1374 aa23,2■■□□□ 1,31
Pkp4-210ENSMUST00000168631 Golga2Q921M4 999 aa23,2■■□□□ 1,3
Pkp4-210ENSMUST00000168631 Sox12Q04890 314 aa23,19■■□□□ 1,3
Pkp4-210ENSMUST00000168631 Fan1Q69ZT1 1020 aa23,19■■□□□ 1,3
Pkp4-210ENSMUST00000168631 Chmp4bQ9D8B3 224 aaKnown RBP23,19■■□□□ 1,3
Pkp4-210ENSMUST00000168631 Txndc2Q6P902 515 aa23,16■■□□□ 1,3
Pkp4-210ENSMUST00000168631 Phldb1Q6PDH0 1371 aaKnown RBP23,15■■□□□ 1,3
Pkp4-210ENSMUST00000168631 Clstn1Q9EPL2 979 aa23,14■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Rtf1A2AQ19 715 aaKnown RBP23,14■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Rock2P70336 1388 aa23,13■■□□□ 1,29
Pkp4-210ENSMUST00000168631 LrpprcQ6PB66 1392 aaKnown RBP23,13■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Pes1Q9EQ61 584 aaKnown RBP23,13■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Zfp777B9EKF4 885 aa23,12■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Synj1Q8CHC4 1574 aa23,12■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Tnnt1O88346 262 aa23,11■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Psme1P97371 249 aa23,1■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Mbd3Q9Z2D8 285 aaKnown RBP23,1■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Pibf1E9Q6K3 756 aa23,1■■□□□ 1,29
Pkp4-210ENSMUST00000168631 KnstrnQ9D9Z1 312 aaKnown RBP23,1■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Znf326O88291 580 aa23,09■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Crybg2B7ZCC2 1516 aa23,08■■□□□ 1,29
Pkp4-210ENSMUST00000168631 Ksr2Q3UVC0 959 aa23,07■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Plekhh2Q8C115 1491 aa23,06■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Utp14aQ640M1 767 aaKnown RBP23,06■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Usp47Q8BY87 1376 aa23,05■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Pank3Q8R2W9 370 aa23,05■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Q3TQI7 289 aaKnown RBP23,04■■□□□ 1,28
Pkp4-210ENSMUST00000168631 EspnQ9ET47 871 aa23,04■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Dhx29Q6PGC1 1365 aaKnown RBP23,04■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Atad2bE9Q166 1460 aaKnown RBP23,04■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Dnai1Q8C0M8 701 aa23,03■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Smarca2Q6DIC0 1577 aa23,03■■□□□ 1,28
Pkp4-210ENSMUST00000168631 Casc1Q6TDU8 730 aa23,02■■□□□ 1,27
Pkp4-210ENSMUST00000168631 Inpp5dQ9ES52 1191 aa23,01■■□□□ 1,27
Pkp4-210ENSMUST00000168631 HnrnpuQ8VEK3 800 aaKnown RBP23■■□□□ 1,27
Pkp4-210ENSMUST00000168631 WrnO09053 1401 aa23■■□□□ 1,27
Pkp4-210ENSMUST00000168631 Dhx57Q6P5D3 1388 aaKnown RBP22,99■■□□□ 1,27
Pkp4-210ENSMUST00000168631 Sh3bp5Q9Z131 463 aa22,97■■□□□ 1,27
Pkp4-210ENSMUST00000168631 GorabQ8BRM2 368 aa22,97■■□□□ 1,27
Pkp4-210ENSMUST00000168631 MlecQ6ZQI3 291 aaKnown RBP22,95■■□□□ 1,26
Pkp4-210ENSMUST00000168631 Tdrd9Q14BI7 1383 aa22,95■■□□□ 1,26
Pkp4-210ENSMUST00000168631 Rassf8Q8CJ96 419 aa22,95■■□□□ 1,26
Pkp4-210ENSMUST00000168631 Mfap1aC0HKD8 439 aaKnown RBP22,94■■□□□ 1,26
Pkp4-210ENSMUST00000168631 Mfap1bC0HKD9 439 aaKnown RBP22,94■■□□□ 1,26
Pkp4-210ENSMUST00000168631 Sart3Q9JLI8 962 aaKnown RBP22,93■■□□□ 1,26
Pkp4-210ENSMUST00000168631 PnnO35691 725 aaKnown RBP22,92■■□□□ 1,26
Pkp4-210ENSMUST00000168631 Tsen2Q6P7W5 460 aa22,92■■□□□ 1,26
Pkp4-210ENSMUST00000168631 Nolc1E9Q5C9 702 aaKnown RBP22,92■■□□□ 1,26
Pkp4-210ENSMUST00000168631 Esx1O88933 382 aa22,89■■□□□ 1,26
Pkp4-210ENSMUST00000168631 Smg6P61406 1418 aaKnown RBP22,89■■□□□ 1,26
Pkp4-210ENSMUST00000168631 UacaQ8CGB3 1411 aa22,89■■□□□ 1,25
Pkp4-210ENSMUST00000168631 MccE9PWI3 1003 aa22,88■■□□□ 1,25
Pkp4-210ENSMUST00000168631 Ggt6Q6PDE7 497 aa22,88■■□□□ 1,25
Pkp4-210ENSMUST00000168631 Spag9Q58A65 1321 aaKnown RBP22,87■■□□□ 1,25
Pkp4-210ENSMUST00000168631 Usp40Q8BWR4 1235 aa22,87■■□□□ 1,25
Pkp4-210ENSMUST00000168631 ScribQ80U72 1612 aa22,87■■□□□ 1,25
Pkp4-210ENSMUST00000168631 ChgaP26339 463 aaKnown RBP22,87■■□□□ 1,25
Pkp4-210ENSMUST00000168631 Ipo8Q7TMY7 1010 aa22,85■■□□□ 1,25
Pkp4-210ENSMUST00000168631 Jph4Q80WT0 628 aa22,84■■□□□ 1,25
Pkp4-210ENSMUST00000168631 Ccar1Q8CH18 1146 aaKnown RBP22,84■■□□□ 1,25
Pkp4-210ENSMUST00000168631 Zfp644E9QA22 1323 aa22,84■■□□□ 1,25
Pkp4-210ENSMUST00000168631 Q8BT18 775 aa22,83■■□□□ 1,24
Pkp4-210ENSMUST00000168631 Shq1Q7TMX5 569 aa22,82■■□□□ 1,24
Pkp4-210ENSMUST00000168631 Fam184bQ0KK56 942 aa22,82■■□□□ 1,24
Pkp4-210ENSMUST00000168631 Mink1Q9JM52 1308 aa22,82■■□□□ 1,24
Pkp4-210ENSMUST00000168631 Dnttip2Q8R2M2 758 aaKnown RBP22,8■■□□□ 1,24
Pkp4-210ENSMUST00000168631 Cabp4Q8VHC5 271 aa22,8■■□□□ 1,24
Pkp4-210ENSMUST00000168631 Pcmtd1P59913 357 aa22,8■■□□□ 1,24
Pkp4-210ENSMUST00000168631 CenpjQ569L8 1344 aa22,79■■□□□ 1,24
Retrieved 100 of 22,080 RNA–protein pairs in 11,1 ms