RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 CntlnA2AM05 1397 aa23.35■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Dcaf11Q91VU6 549 aa23.35■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Iqcf3Q9D498 203 aa23.35■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Kif3bQ61771 747 aa23.34■■□□□ 1.33
Pkp4-210ENSMUST00000168631 NudcO35685 332 aaKnown RBP23.34■■□□□ 1.33
Pkp4-210ENSMUST00000168631 U2af1Q9D883 239 aaKnown RBP23.34■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Senp3Q9EP97 568 aaKnown RBP23.33■■□□□ 1.33
Pkp4-210ENSMUST00000168631 U2surpQ6NV83 1029 aaKnown RBP23.33■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Znf316Q6PGE4 1016 aa23.31■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Tmco5bQ80X59 307 aa23.3■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Birc3O08863 600 aa23.3■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Fhad1A6PWD2 1420 aa23.3■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Ccdc27Q3V036 639 aa23.29■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Srcin1Q9QWI6 1250 aa23.29■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Tmf1B9EKI3 1091 aa23.29■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Htatsf1Q8BGC0 757 aa23.28■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Mak16Q8BGS0 296 aaKnown RBP23.28■■□□□ 1.32
Pkp4-210ENSMUST00000168631 PtmaP26350 111 aa23.27■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Sart1Q9Z315 806 aaKnown RBP23.27■■□□□ 1.32
Pkp4-210ENSMUST00000168631 CatipB9EKE5 520 aa23.27■■□□□ 1.32
Pkp4-210ENSMUST00000168631 Tcerg1Q8CGF7 1100 aaKnown RBP23.26■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Arhgap35Q91YM2 1499 aa23.25■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Ccdc9Q8VC31 543 aaKnown RBP23.25■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Hsp90b1P08113 802 aaKnown RBP23.23■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Cluap1Q8R3P7 413 aa23.23■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Slc4a1apE9PX68 744 aa23.23■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Map7O88735 730 aa23.22■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Znf330Q922H9 316 aa23.22■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Nup155Q99P88 1391 aaKnown RBP23.21■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Ccnb3Q810T2 1396 aa23.21■■□□□ 1.31
Pkp4-210ENSMUST00000168631 CrbnQ8C7D2 445 aa23.21■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Carmil1Q6EDY6 1374 aa23.2■■□□□ 1.31
Pkp4-210ENSMUST00000168631 Golga2Q921M4 999 aa23.2■■□□□ 1.3
Pkp4-210ENSMUST00000168631 Sox12Q04890 314 aa23.19■■□□□ 1.3
Pkp4-210ENSMUST00000168631 Fan1Q69ZT1 1020 aa23.19■■□□□ 1.3
Pkp4-210ENSMUST00000168631 Chmp4bQ9D8B3 224 aaKnown RBP23.19■■□□□ 1.3
Pkp4-210ENSMUST00000168631 Txndc2Q6P902 515 aa23.16■■□□□ 1.3
Pkp4-210ENSMUST00000168631 Phldb1Q6PDH0 1371 aaKnown RBP23.15■■□□□ 1.3
Pkp4-210ENSMUST00000168631 Clstn1Q9EPL2 979 aa23.14■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Rtf1A2AQ19 715 aaKnown RBP23.14■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Rock2P70336 1388 aa23.13■■□□□ 1.29
Pkp4-210ENSMUST00000168631 LrpprcQ6PB66 1392 aaKnown RBP23.13■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Pes1Q9EQ61 584 aaKnown RBP23.13■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Zfp777B9EKF4 885 aa23.12■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Synj1Q8CHC4 1574 aa23.12■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Tnnt1O88346 262 aa23.11■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Psme1P97371 249 aa23.1■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Mbd3Q9Z2D8 285 aaKnown RBP23.1■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Pibf1E9Q6K3 756 aa23.1■■□□□ 1.29
Pkp4-210ENSMUST00000168631 KnstrnQ9D9Z1 312 aaKnown RBP23.1■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Znf326O88291 580 aa23.09■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Crybg2B7ZCC2 1516 aa23.08■■□□□ 1.29
Pkp4-210ENSMUST00000168631 Ksr2Q3UVC0 959 aa23.07■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Plekhh2Q8C115 1491 aa23.06■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Utp14aQ640M1 767 aaKnown RBP23.06■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Usp47Q8BY87 1376 aa23.05■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Pank3Q8R2W9 370 aa23.05■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Q3TQI7 289 aaKnown RBP23.04■■□□□ 1.28
Pkp4-210ENSMUST00000168631 EspnQ9ET47 871 aa23.04■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Dhx29Q6PGC1 1365 aaKnown RBP23.04■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Atad2bE9Q166 1460 aaKnown RBP23.04■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Dnai1Q8C0M8 701 aa23.03■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Smarca2Q6DIC0 1577 aa23.03■■□□□ 1.28
Pkp4-210ENSMUST00000168631 Casc1Q6TDU8 730 aa23.02■■□□□ 1.27
Pkp4-210ENSMUST00000168631 Inpp5dQ9ES52 1191 aa23.01■■□□□ 1.27
Pkp4-210ENSMUST00000168631 HnrnpuQ8VEK3 800 aaKnown RBP23■■□□□ 1.27
Pkp4-210ENSMUST00000168631 WrnO09053 1401 aa23■■□□□ 1.27
Pkp4-210ENSMUST00000168631 Dhx57Q6P5D3 1388 aaKnown RBP22.99■■□□□ 1.27
Pkp4-210ENSMUST00000168631 Sh3bp5Q9Z131 463 aa22.97■■□□□ 1.27
Pkp4-210ENSMUST00000168631 GorabQ8BRM2 368 aa22.97■■□□□ 1.27
Pkp4-210ENSMUST00000168631 MlecQ6ZQI3 291 aaKnown RBP22.95■■□□□ 1.26
Pkp4-210ENSMUST00000168631 Tdrd9Q14BI7 1383 aa22.95■■□□□ 1.26
Pkp4-210ENSMUST00000168631 Rassf8Q8CJ96 419 aa22.95■■□□□ 1.26
Pkp4-210ENSMUST00000168631 Mfap1aC0HKD8 439 aaKnown RBP22.94■■□□□ 1.26
Pkp4-210ENSMUST00000168631 Mfap1bC0HKD9 439 aaKnown RBP22.94■■□□□ 1.26
Pkp4-210ENSMUST00000168631 Sart3Q9JLI8 962 aaKnown RBP22.93■■□□□ 1.26
Pkp4-210ENSMUST00000168631 PnnO35691 725 aaKnown RBP22.92■■□□□ 1.26
Pkp4-210ENSMUST00000168631 Tsen2Q6P7W5 460 aa22.92■■□□□ 1.26
Pkp4-210ENSMUST00000168631 Nolc1E9Q5C9 702 aaKnown RBP22.92■■□□□ 1.26
Pkp4-210ENSMUST00000168631 Esx1O88933 382 aa22.89■■□□□ 1.26
Pkp4-210ENSMUST00000168631 Smg6P61406 1418 aaKnown RBP22.89■■□□□ 1.26
Pkp4-210ENSMUST00000168631 UacaQ8CGB3 1411 aa22.89■■□□□ 1.25
Pkp4-210ENSMUST00000168631 MccE9PWI3 1003 aa22.88■■□□□ 1.25
Pkp4-210ENSMUST00000168631 Ggt6Q6PDE7 497 aa22.88■■□□□ 1.25
Pkp4-210ENSMUST00000168631 Spag9Q58A65 1321 aaKnown RBP22.87■■□□□ 1.25
Pkp4-210ENSMUST00000168631 Usp40Q8BWR4 1235 aa22.87■■□□□ 1.25
Pkp4-210ENSMUST00000168631 ScribQ80U72 1612 aa22.87■■□□□ 1.25
Pkp4-210ENSMUST00000168631 ChgaP26339 463 aaKnown RBP22.87■■□□□ 1.25
Pkp4-210ENSMUST00000168631 Ipo8Q7TMY7 1010 aa22.85■■□□□ 1.25
Pkp4-210ENSMUST00000168631 Jph4Q80WT0 628 aa22.84■■□□□ 1.25
Pkp4-210ENSMUST00000168631 Ccar1Q8CH18 1146 aaKnown RBP22.84■■□□□ 1.25
Pkp4-210ENSMUST00000168631 Zfp644E9QA22 1323 aa22.84■■□□□ 1.25
Pkp4-210ENSMUST00000168631 Q8BT18 775 aa22.83■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Shq1Q7TMX5 569 aa22.82■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Fam184bQ0KK56 942 aa22.82■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Mink1Q9JM52 1308 aa22.82■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Dnttip2Q8R2M2 758 aaKnown RBP22.8■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Cabp4Q8VHC5 271 aa22.8■■□□□ 1.24
Pkp4-210ENSMUST00000168631 Pcmtd1P59913 357 aa22.8■■□□□ 1.24
Pkp4-210ENSMUST00000168631 CenpjQ569L8 1344 aa22.79■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms