RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 Ppp4r2Q0VGB7 417 aa18.61■□□□□ 0.57
Usf1-208ENSMUST00000161241 Mrs2Q5NCE8 434 aa18.59■□□□□ 0.57
Usf1-208ENSMUST00000161241 Rad54l2Q99NG0 1466 aa18.59■□□□□ 0.57
Usf1-208ENSMUST00000161241 NexmifQ5DTT1 1515 aa18.59■□□□□ 0.57
Usf1-208ENSMUST00000161241 Slc4a2P13808 1237 aaKnown RBP18.57■□□□□ 0.56
Usf1-208ENSMUST00000161241 Kif27Q7M6Z4 1394 aa18.57■□□□□ 0.56
Usf1-208ENSMUST00000161241 Usp47Q8BY87 1376 aa18.56■□□□□ 0.56
Usf1-208ENSMUST00000161241 NrdcQ8BHG1 1161 aa18.55■□□□□ 0.56
Usf1-208ENSMUST00000161241 CadpsQ80TJ1 1355 aa18.55■□□□□ 0.56
Usf1-208ENSMUST00000161241 Lamc1P02468 1607 aaKnown RBP18.55■□□□□ 0.56
Usf1-208ENSMUST00000161241 Ift140E9PY46 1464 aa18.54■□□□□ 0.56
Usf1-208ENSMUST00000161241 BC005561E9Q5E2 1589 aa18.54■□□□□ 0.56
Usf1-208ENSMUST00000161241 Pla2r1Q62028 1487 aa18.53■□□□□ 0.56
Usf1-208ENSMUST00000161241 Eif5bQ05D44 1216 aaKnown RBP18.52■□□□□ 0.56
Usf1-208ENSMUST00000161241 Disp1Q3TDN0 1521 aa18.52■□□□□ 0.56
Usf1-208ENSMUST00000161241 PnisrA2AJT4 805 aaKnown RBP18.52■□□□□ 0.56
Usf1-208ENSMUST00000161241 Pik3c2gO70167 1506 aa18.52■□□□□ 0.55
Usf1-208ENSMUST00000161241 Kif21bQ9QXL1 1668 aa18.51■□□□□ 0.55
Usf1-208ENSMUST00000161241 Pkd2O35245 966 aa18.51■□□□□ 0.55
Usf1-208ENSMUST00000161241 Exoc6Q8R313 802 aa18.49■□□□□ 0.55
Usf1-208ENSMUST00000161241 Wwc2Q6NXJ0 1187 aa18.47■□□□□ 0.55
Usf1-208ENSMUST00000161241 Abcc5Q9R1X5 1436 aa18.47■□□□□ 0.55
Usf1-208ENSMUST00000161241 Plekhh2Q8C115 1491 aa18.46■□□□□ 0.55
Usf1-208ENSMUST00000161241 Plekhg5Q66T02 1073 aa18.46■□□□□ 0.55
Usf1-208ENSMUST00000161241 Cabp1Q9JLK7 227 aa18.45■□□□□ 0.54
Usf1-208ENSMUST00000161241 Cwc22Q8C5N3 908 aaKnown RBP18.45■□□□□ 0.54
Usf1-208ENSMUST00000161241 Magi3Q9EQJ9 1476 aa18.44■□□□□ 0.54
Usf1-208ENSMUST00000161241 Adamts12Q811B3 1600 aa18.44■□□□□ 0.54
Usf1-208ENSMUST00000161241 Liat1Q810M6 228 aa18.44■□□□□ 0.54
Usf1-208ENSMUST00000161241 Soga1E1U8D0 1418 aa18.43■□□□□ 0.54
Usf1-208ENSMUST00000161241 Arhgef12Q8R4H2 1543 aaKnown RBP18.42■□□□□ 0.54
Usf1-208ENSMUST00000161241 Mbd5B1AYB6 1498 aa18.41■□□□□ 0.54
Usf1-208ENSMUST00000161241 WizO88286 1684 aaKnown RBP18.41■□□□□ 0.54
Usf1-208ENSMUST00000161241 Il16O54824 1322 aa18.38■□□□□ 0.53
Usf1-208ENSMUST00000161241 SphkapQ6NSW3 1687 aa18.38■□□□□ 0.53
Usf1-208ENSMUST00000161241 Kdm3bQ6ZPY7 1562 aa18.38■□□□□ 0.53
Usf1-208ENSMUST00000161241 Grin2aP35436 1464 aa18.37■□□□□ 0.53
Usf1-208ENSMUST00000161241 Zfp644E9QA22 1323 aa18.37■□□□□ 0.53
Usf1-208ENSMUST00000161241 Eif4g3Q80XI3 1579 aaKnown RBP18.37■□□□□ 0.53
Usf1-208ENSMUST00000161241 Pak3Q61036 559 aa18.36■□□□□ 0.53
Usf1-208ENSMUST00000161241 P3h3Q8CG70 732 aa18.36■□□□□ 0.53
Usf1-208ENSMUST00000161241 Arhgef40Q3UPH7 1517 aa18.35■□□□□ 0.53
Usf1-208ENSMUST00000161241 Plb1Q3TTY0 1478 aa18.35■□□□□ 0.53
Usf1-208ENSMUST00000161241 Mtus2Q3UHD3 1353 aa18.35■□□□□ 0.53
Usf1-208ENSMUST00000161241 Egfem1Q8C088 590 aa18.34■□□□□ 0.53
Usf1-208ENSMUST00000161241 AlkP97793 1621 aa18.34■□□□□ 0.53
Usf1-208ENSMUST00000161241 Dapk1Q80YE7 1442 aa18.34■□□□□ 0.53
Usf1-208ENSMUST00000161241 Naip6Q9JIB6 1403 aa18.34■□□□□ 0.53
Usf1-208ENSMUST00000161241 Rapgef6Q5NCJ1 1609 aa18.33■□□□□ 0.53
Usf1-208ENSMUST00000161241 Kdm6bQ5NCY0 1641 aa18.33■□□□□ 0.53
Usf1-208ENSMUST00000161241 Map3k4O08648 1597 aa18.33■□□□□ 0.52
Usf1-208ENSMUST00000161241 Myom3A2ABU4 1439 aa18.33■□□□□ 0.52
Usf1-208ENSMUST00000161241 Ofd1Q80Z25 1017 aa18.32■□□□□ 0.52
Usf1-208ENSMUST00000161241 Ifnlr1Q8CGK5 535 aa18.32■□□□□ 0.52
Usf1-208ENSMUST00000161241 Ncoa3O09000 1398 aa18.32■□□□□ 0.52
Usf1-208ENSMUST00000161241 DroshaQ5HZJ0 1373 aaKnown RBP18.32■□□□□ 0.52
Usf1-208ENSMUST00000161241 Kif14L0N7N1 1674 aaKnown RBP18.31■□□□□ 0.52
Usf1-208ENSMUST00000161241 Cdc42bpaQ3UU96 1719 aa18.3■□□□□ 0.52
Usf1-208ENSMUST00000161241 Adcy10Q8C0T9 1614 aa18.3■□□□□ 0.52
Usf1-208ENSMUST00000161241 Mug2P28666 1451 aa18.29■□□□□ 0.52
Usf1-208ENSMUST00000161241 Ccdc27Q3V036 639 aa18.28■□□□□ 0.52
Usf1-208ENSMUST00000161241 Tcerg1Q8CGF7 1100 aaKnown RBP18.28■□□□□ 0.52
Usf1-208ENSMUST00000161241 Ipo9Q91YE6 1041 aa18.27■□□□□ 0.51
Usf1-208ENSMUST00000161241 Arhgef11Q68FM7 1552 aa18.27■□□□□ 0.51
Usf1-208ENSMUST00000161241 Mink1Q9JM52 1308 aa18.26■□□□□ 0.51
Usf1-208ENSMUST00000161241 PxdnQ3UQ28 1475 aa18.26■□□□□ 0.51
Usf1-208ENSMUST00000161241 Adgrb2Q8CGM1 1561 aa18.26■□□□□ 0.51
Usf1-208ENSMUST00000161241 Abca16E9PWJ7 1678 aa18.25■□□□□ 0.51
Usf1-208ENSMUST00000161241 Rock2P70336 1388 aa18.25■□□□□ 0.51
Usf1-208ENSMUST00000161241 Rundc1Q0VDN7 615 aa18.25■□□□□ 0.51
Usf1-208ENSMUST00000161241 Kiaa1551Q5DTW7 1521 aa18.25■□□□□ 0.51
Usf1-208ENSMUST00000161241 L3mbtl2P59178 703 aa18.24■□□□□ 0.51
Usf1-208ENSMUST00000161241 WrnO09053 1401 aa18.24■□□□□ 0.51
Usf1-208ENSMUST00000161241 Dnajc5P60904 198 aa18.24■□□□□ 0.51
Usf1-208ENSMUST00000161241 Supt6hQ62383 1726 aaKnown RBP18.24■□□□□ 0.51
Usf1-208ENSMUST00000161241 Dhx9O70133 1380 aaKnown RBP18.23■□□□□ 0.51
Usf1-208ENSMUST00000161241 Card11Q8CIS0 1159 aa18.22■□□□□ 0.51
Usf1-208ENSMUST00000161241 Dhx57Q6P5D3 1388 aaKnown RBP18.22■□□□□ 0.51
Usf1-208ENSMUST00000161241 Kank1E9Q238 1360 aa18.21■□□□□ 0.51
Usf1-208ENSMUST00000161241 Rgl3Q3UYI5 709 aa18.21■□□□□ 0.51
Usf1-208ENSMUST00000161241 Trpm2Q91YD4 1506 aa18.21■□□□□ 0.51
Usf1-208ENSMUST00000161241 RalgapbQ8BQZ4 1484 aa18.21■□□□□ 0.51
Usf1-208ENSMUST00000161241 Setd1bQ8CFT2 1985 aa18.2■□□□□ 0.5
Usf1-208ENSMUST00000161241 Wdr7Q920I9 1489 aa18.19■□□□□ 0.5
Usf1-208ENSMUST00000161241 Cpsf1Q9EPU4 1441 aaKnown RBP18.18■□□□□ 0.5
Usf1-208ENSMUST00000161241 Pbrm1Q8BSQ9 1634 aaKnown RBP18.18■□□□□ 0.5
Usf1-208ENSMUST00000161241 Ttll5Q8CHB8 1328 aa18.18■□□□□ 0.5
Usf1-208ENSMUST00000161241 Ccdc9Q8VC31 543 aaKnown RBP18.18■□□□□ 0.5
Usf1-208ENSMUST00000161241 Upf2A2AT37 1269 aaKnown RBP18.17■□□□□ 0.5
Usf1-208ENSMUST00000161241 Slc4a3P16283 1227 aa18.17■□□□□ 0.5
Usf1-208ENSMUST00000161241 Cc2d2bA0A286YDU8 1405 aa18.14■□□□□ 0.49
Usf1-208ENSMUST00000161241 Cdk13Q69ZA1 1511 aaKnown RBP18.14■□□□□ 0.49
Usf1-208ENSMUST00000161241 Iqgap1Q9JKF1 1657 aaKnown RBP18.13■□□□□ 0.49
Usf1-208ENSMUST00000161241 Ccdc141E9Q8Q6 1531 aa18.12■□□□□ 0.49
Usf1-208ENSMUST00000161241 Asxl1P59598 1514 aa18.12■□□□□ 0.49
Usf1-208ENSMUST00000161241 Polr3aB2RXC6 1390 aa18.12■□□□□ 0.49
Usf1-208ENSMUST00000161241 Gapvd1Q6PAR5 1458 aa18.12■□□□□ 0.49
Usf1-208ENSMUST00000161241 Mapkbp1Q6NS57 1503 aa18.11■□□□□ 0.49
Usf1-208ENSMUST00000161241 Trak1Q6PD31 939 aa18.11■□□□□ 0.49
Usf1-208ENSMUST00000161241 Setd1aE9PYH6 1716 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms