RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Ncoa2Q61026 1462 aa11.12□□□□□ -0.63
Bdnf-208ENSMUST00000111049 CadpsQ80TJ1 1355 aa11.11□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Zfp644E9QA22 1323 aa11.1□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Ift140E9PY46 1464 aa11.1□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Thoc2B1AZI6 1594 aaKnown RBP11.1□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Zbtb4Q5F293 982 aa11.09□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Grwd1Q810D6 446 aaKnown RBP11.09□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Rundc1Q0VDN7 615 aa11.09□□□□□ -0.63
Bdnf-208ENSMUST00000111049 Slc4a2P13808 1237 aaKnown RBP11.08□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Washc2Q6PGL7 1334 aa11.08□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Samd9lQ69Z37 1561 aa11.08□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Fkbp15Q6P9Q6 1216 aaKnown RBP11.08□□□□□ -0.64
Bdnf-208ENSMUST00000111049 NexmifQ5DTT1 1515 aa11.08□□□□□ -0.64
Bdnf-208ENSMUST00000111049 WrnO09053 1401 aa11.07□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Trak1Q6PD31 939 aa11.07□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Gpatch8A2A6A1 1505 aa11.06□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Bcl11aQ9QYE3 773 aa11.05□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Rfx7F8VPJ6 1459 aa11.05□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Ncoa1P70365 1447 aa11.04□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Upf2A2AT37 1269 aaKnown RBP11.04□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Lmtk2Q3TYD6 1471 aa11.04□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Clstn2Q9ER65 966 aa11.04□□□□□ -0.64
Bdnf-208ENSMUST00000111049 PnisrA2AJT4 805 aaKnown RBP11.03□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Dapk1Q80YE7 1442 aa11.03□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Slc4a3P16283 1227 aa11.03□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Abcc5Q9R1X5 1436 aa11.03□□□□□ -0.64
Bdnf-208ENSMUST00000111049 Rprd2Q6NXI6 1469 aaKnown RBP11.02□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Map4P27546 1125 aaKnown RBP11.01□□□□□ -0.65
Bdnf-208ENSMUST00000111049 BC005561E9Q5E2 1589 aa11□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Mug1P28665 1476 aa11□□□□□ -0.65
Bdnf-208ENSMUST00000111049 ArxO35085 564 aa11□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Dhx57Q6P5D3 1388 aaKnown RBP11□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Rad21Q61550 635 aaKnown RBP11□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Pla2r1Q62028 1487 aa11□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Nup155Q99P88 1391 aaKnown RBP10.99□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Tcerg1Q8CGF7 1100 aaKnown RBP10.99□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Grin2aP35436 1464 aa10.99□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Plekhg5Q66T02 1073 aa10.98□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Cc2d2bA0A286YDU8 1405 aa10.98□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Os9Q8K2C7 672 aa10.98□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Il16O54824 1322 aa10.97□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Soga1E1U8D0 1418 aa10.97□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Dhx9O70133 1380 aaKnown RBP10.96□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Cul7Q8VE73 1689 aa10.96□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Dennd4bQ3U1Y4 1499 aa10.96□□□□□ -0.65
Bdnf-208ENSMUST00000111049 Rock2P70336 1388 aa10.96□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Fam135aQ6NS59 1506 aa10.96□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Plb1Q3TTY0 1478 aa10.95□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Rrp7aQ9D1C9 280 aaKnown RBP10.95□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Pik3c2gO70167 1506 aa10.95□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Zscan21Q07231 555 aa10.95□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Ttll5Q8CHB8 1328 aa10.94□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Gcc2Q8CHG3 1679 aa10.94□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Ccdc27Q3V036 639 aa10.94□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Tdrd9Q14BI7 1383 aa10.94□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Mrc2Q64449 1479 aa10.94□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Fhod3Q76LL6 1578 aa10.94□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Hdac5Q9Z2V6 1113 aa10.93□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Abca5Q8K448 1642 aa10.93□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Pak3Q61036 559 aa10.93□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Ncoa3O09000 1398 aa10.93□□□□□ -0.66
Bdnf-208ENSMUST00000111049 WizO88286 1684 aaKnown RBP10.93□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Erich6D3Z6S9 713 aa10.93□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Pprc1Q6NZN1 1644 aa10.92□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Mak16Q8BGS0 296 aaKnown RBP10.92□□□□□ -0.66
Bdnf-208ENSMUST00000111049 4933416C03RikQ3V063 378 aa10.92□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Arhgap31A6X8Z5 1425 aa10.92□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Magi3Q9EQJ9 1476 aa10.91□□□□□ -0.66
Bdnf-208ENSMUST00000111049 Ipo9Q91YE6 1041 aa10.9□□□□□ -0.66
Bdnf-208ENSMUST00000111049 PxdnQ3UQ28 1475 aa10.89□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Kif21aQ9QXL2 1672 aa10.89□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Mroh3A0A1D5RM54 893 aa10.88□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Fam163aQ8CAA5 168 aa10.88□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Disp1Q3TDN0 1521 aa10.88□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Arhgef40Q3UPH7 1517 aa10.88□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Myom3A2ABU4 1439 aa10.88□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Rpgrip1lQ8CG73 1264 aa10.88□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Nlrp6Q91WS2 869 aa10.88□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Ifit1bl1D3Z6F0 470 aa10.87□□□□□ -0.67
Bdnf-208ENSMUST00000111049 DaxxO35613 739 aa10.87□□□□□ -0.67
Bdnf-208ENSMUST00000111049 L3mbtl2P59178 703 aa10.87□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Rapgef6Q5NCJ1 1609 aa10.87□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Hsp90aa1P07901 733 aaKnown RBP10.85□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Kdm3bQ6ZPY7 1562 aa10.85□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Liat1Q810M6 228 aa10.85□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Arhgef12Q8R4H2 1543 aaKnown RBP10.85□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Adamts12Q811B3 1600 aa10.85□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Kcnh8P59111 1102 aa10.84□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Ccdc9Q8VC31 543 aaKnown RBP10.84□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Adgrb2Q8CGM1 1561 aa10.84□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Magi1Q6RHR9 1471 aa10.84□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Setbp1Q9Z180 1582 aa10.84□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Kdm2aP59997 1161 aa10.84□□□□□ -0.67
Bdnf-208ENSMUST00000111049 Pank3Q8R2W9 370 aa10.83□□□□□ -0.68
Bdnf-208ENSMUST00000111049 Sart1Q9Z315 806 aaKnown RBP10.83□□□□□ -0.68
Bdnf-208ENSMUST00000111049 Adcy10Q8C0T9 1614 aa10.83□□□□□ -0.68
Bdnf-208ENSMUST00000111049 DroshaQ5HZJ0 1373 aaKnown RBP10.82□□□□□ -0.68
Bdnf-208ENSMUST00000111049 Ccdc141E9Q8Q6 1531 aa10.82□□□□□ -0.68
Bdnf-208ENSMUST00000111049 Tmf1B9EKI3 1091 aa10.82□□□□□ -0.68
Bdnf-208ENSMUST00000111049 Jph4Q80WT0 628 aa10.82□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms