RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Psme1P97371 249 aa14.22□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Smarca2Q6DIC0 1577 aa14.22□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Cc2d2aQ8CFW7 1633 aa14.22□□□□□ -0.13
Scn8a-203ENSMUST00000108908 CftrP26361 1476 aa14.21□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Smarca4Q3TKT4 1613 aaKnown RBP14.21□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Map7O88735 730 aa14.21□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Tmf1B9EKI3 1091 aa14.21□□□□□ -0.13
Scn8a-203ENSMUST00000108908 Rapgef2Q8CHG7 1496 aa14.21□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Speer4f1Q9D5Q6 258 aa14.2□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Rwdd1Q9CQK7 243 aa14.2□□□□□ -0.14
Scn8a-203ENSMUST00000108908 ScribQ80U72 1612 aa14.2□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Exoc6Q8R313 802 aa14.19□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Lemd3Q9WU40 921 aa14.19□□□□□ -0.14
Scn8a-203ENSMUST00000108908 CntlnA2AM05 1397 aa14.19□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Sox12Q04890 314 aa14.18□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Rtf1A2AQ19 715 aaKnown RBP14.18□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Chmp4bQ9D8B3 224 aaKnown RBP14.18□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Senp3Q9EP97 568 aaKnown RBP14.17□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Plekhh2Q8C115 1491 aa14.17□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Spryd3E9Q9B3 442 aa14.17□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Hsp90b1P08113 802 aaKnown RBP14.17□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Nup155Q99P88 1391 aaKnown RBP14.16□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Pes1Q9EQ61 584 aaKnown RBP14.16□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Birc3O08863 600 aa14.16□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Znf316Q6PGE4 1016 aa14.16□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Htatsf1Q8BGC0 757 aa14.16□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Crybg2B7ZCC2 1516 aa14.15□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Dcaf11Q91VU6 549 aa14.15□□□□□ -0.14
Scn8a-203ENSMUST00000108908 Txndc2Q6P902 515 aa14.14□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Rock2P70336 1388 aa14.14□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Kif3bQ61771 747 aa14.14□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Ppm1gQ61074 542 aa14.14□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Zfp777B9EKF4 885 aa14.13□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Tnnt1O88346 262 aa14.12□□□□□ -0.15
Scn8a-203ENSMUST00000108908 U2af1Q9D883 239 aaKnown RBP14.12□□□□□ -0.15
Scn8a-203ENSMUST00000108908 MlecQ6ZQI3 291 aaKnown RBP14.12□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Sh3bp5Q9Z131 463 aa14.11□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Tmco5bQ80X59 307 aa14.1□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Phldb1Q6PDH0 1371 aaKnown RBP14.1□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Ggt6Q6PDE7 497 aa14.1□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Znf330Q922H9 316 aa14.09□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Dhx57Q6P5D3 1388 aaKnown RBP14.09□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Golga2Q921M4 999 aa14.09□□□□□ -0.15
Scn8a-203ENSMUST00000108908 KnstrnQ9D9Z1 312 aaKnown RBP14.09□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Mbd3Q9Z2D8 285 aaKnown RBP14.09□□□□□ -0.15
Scn8a-203ENSMUST00000108908 PnnO35691 725 aaKnown RBP14.09□□□□□ -0.15
Scn8a-203ENSMUST00000108908 Q8BT18 775 aa14.08□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Ccnb3Q810T2 1396 aa14.08□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Ccdc27Q3V036 639 aa14.08□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Ccdc9Q8VC31 543 aaKnown RBP14.08□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Zscan21Q07231 555 aa14.07□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Supt16hQ920B9 1047 aa14.07□□□□□ -0.16
Scn8a-203ENSMUST00000108908 CrbnQ8C7D2 445 aa14.06□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Iqgap2Q3UQ44 1575 aa14.05□□□□□ -0.16
Scn8a-203ENSMUST00000108908 MccE9PWI3 1003 aa14.05□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Srcin1Q9QWI6 1250 aa14.05□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Carmil1Q6EDY6 1374 aa14.05□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Q3TQI7 289 aaKnown RBP14.05□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Fan1Q69ZT1 1020 aa14.04□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Casc1Q6TDU8 730 aa14.04□□□□□ -0.16
Scn8a-203ENSMUST00000108908 HnrnpuQ8VEK3 800 aaKnown RBP14.04□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Rassf8Q8CJ96 419 aa14.03□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Cluap1Q8R3P7 413 aa14.03□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Atad2bE9Q166 1460 aaKnown RBP14.03□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Mak16Q8BGS0 296 aaKnown RBP14.03□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Sart1Q9Z315 806 aaKnown RBP14.02□□□□□ -0.16
Scn8a-203ENSMUST00000108908 Slc4a1apE9PX68 744 aa14.01□□□□□ -0.17
Scn8a-203ENSMUST00000108908 Pibf1E9Q6K3 756 aa14.01□□□□□ -0.17
Scn8a-203ENSMUST00000108908 Chmp5Q9D7S9 219 aa14□□□□□ -0.17
Scn8a-203ENSMUST00000108908 Usp47Q8BY87 1376 aa13.99□□□□□ -0.17
Scn8a-203ENSMUST00000108908 Pcmtd1P59913 357 aa13.99□□□□□ -0.17
Scn8a-203ENSMUST00000108908 EspnQ9ET47 871 aa13.99□□□□□ -0.17
Scn8a-203ENSMUST00000108908 Ksr2Q3UVC0 959 aa13.98□□□□□ -0.17
Scn8a-203ENSMUST00000108908 Tcerg1Q8CGF7 1100 aaKnown RBP13.98□□□□□ -0.17
Scn8a-203ENSMUST00000108908 Sart3Q9JLI8 962 aaKnown RBP13.98□□□□□ -0.17
Scn8a-203ENSMUST00000108908 Spag9Q58A65 1321 aaKnown RBP13.98□□□□□ -0.17
Scn8a-203ENSMUST00000108908 WrnO09053 1401 aa13.97□□□□□ -0.17
Scn8a-203ENSMUST00000108908 LrpprcQ6PB66 1392 aaKnown RBP13.97□□□□□ -0.17
Scn8a-203ENSMUST00000108908 CenpjQ569L8 1344 aa13.96□□□□□ -0.17
Scn8a-203ENSMUST00000108908 Nol10Q5RJG1 687 aaKnown RBP13.96□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Pank3Q8R2W9 370 aa13.95□□□□□ -0.18
Scn8a-203ENSMUST00000108908 UacaQ8CGB3 1411 aa13.95□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Eif4g2Q62448 906 aaKnown RBP13.95□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Mfap1aC0HKD8 439 aaKnown RBP13.94□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Mfap1bC0HKD9 439 aaKnown RBP13.94□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Utp14aQ640M1 767 aaKnown RBP13.94□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Polr1aO35134 1717 aaKnown RBP13.93□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Cc2d2bA0A286YDU8 1405 aa13.92□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Anapc15P60007 132 aa13.91□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Dhx29Q6PGC1 1365 aaKnown RBP13.91□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Ap3b2Q9JME5 1082 aa13.91□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Dnai1Q8C0M8 701 aa13.91□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Ccar1Q8CH18 1146 aaKnown RBP13.91□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Cux1P53564 1515 aa13.9□□□□□ -0.18
Scn8a-203ENSMUST00000108908 MecomP14404 1042 aa13.9□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Erich6bQ9D4S6 220 aa13.9□□□□□ -0.18
Scn8a-203ENSMUST00000108908 GorabQ8BRM2 368 aa13.9□□□□□ -0.18
Scn8a-203ENSMUST00000108908 Tsen2Q6P7W5 460 aa13.89□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Usp40Q8BWR4 1235 aa13.89□□□□□ -0.19
Scn8a-203ENSMUST00000108908 Ubap1lG3UW59 384 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms