RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Gm13695A2AK44 830 aa29.98■■■□□ 2.39
Trim3-202ENSMUST00000106789 Pla2r1Q62028 1487 aa29.98■■■□□ 2.39
Trim3-202ENSMUST00000106789 Mug1P28665 1476 aa29.97■■■□□ 2.39
Trim3-202ENSMUST00000106789 Gcc2Q8CHG3 1679 aa29.96■■■□□ 2.39
Trim3-202ENSMUST00000106789 Setbp1Q9Z180 1582 aa29.96■■■□□ 2.39
Trim3-202ENSMUST00000106789 Pelp1Q9DBD5 1123 aaKnown RBP29.94■■■□□ 2.38
Trim3-202ENSMUST00000106789 Abca5Q8K448 1642 aa29.94■■■□□ 2.38
Trim3-202ENSMUST00000106789 Rfx7F8VPJ6 1459 aa29.93■■■□□ 2.38
Trim3-202ENSMUST00000106789 Ift140E9PY46 1464 aa29.92■■■□□ 2.38
Trim3-202ENSMUST00000106789 Rprd2Q6NXI6 1469 aaKnown RBP29.92■■■□□ 2.38
Trim3-202ENSMUST00000106789 Abcc5Q9R1X5 1436 aa29.86■■■□□ 2.37
Trim3-202ENSMUST00000106789 Fam135aQ6NS59 1506 aa29.86■■■□□ 2.37
Trim3-202ENSMUST00000106789 Kif21aQ9QXL2 1672 aa29.85■■■□□ 2.37
Trim3-202ENSMUST00000106789 Plekhh2Q8C115 1491 aa29.83■■■□□ 2.37
Trim3-202ENSMUST00000106789 Magi3Q9EQJ9 1476 aa29.82■■■□□ 2.36
Trim3-202ENSMUST00000106789 PnisrA2AJT4 805 aaKnown RBP29.8■■■□□ 2.36
Trim3-202ENSMUST00000106789 WizO88286 1684 aaKnown RBP29.77■■■□□ 2.36
Trim3-202ENSMUST00000106789 Grin2aP35436 1464 aa29.75■■■□□ 2.35
Trim3-202ENSMUST00000106789 Mtus2Q3UHD3 1353 aa29.73■■■□□ 2.35
Trim3-202ENSMUST00000106789 Rgl3Q3UYI5 709 aa29.73■■■□□ 2.35
Trim3-202ENSMUST00000106789 Arhgef40Q3UPH7 1517 aa29.73■■■□□ 2.35
Trim3-202ENSMUST00000106789 Pak3Q61036 559 aa29.72■■■□□ 2.35
Trim3-202ENSMUST00000106789 Pik3c2gO70167 1506 aa29.72■■■□□ 2.35
Trim3-202ENSMUST00000106789 Ncoa3O09000 1398 aa29.71■■■□□ 2.35
Trim3-202ENSMUST00000106789 Soga1E1U8D0 1418 aa29.7■■■□□ 2.35
Trim3-202ENSMUST00000106789 Ifnlr1Q8CGK5 535 aa29.7■■■□□ 2.34
Trim3-202ENSMUST00000106789 WrnO09053 1401 aa29.68■■■□□ 2.34
Trim3-202ENSMUST00000106789 Liat1Q810M6 228 aa29.68■■■□□ 2.34
Trim3-202ENSMUST00000106789 Ofd1Q80Z25 1017 aa29.66■■■□□ 2.34
Trim3-202ENSMUST00000106789 Adamts12Q811B3 1600 aa29.65■■■□□ 2.34
Trim3-202ENSMUST00000106789 PxdnQ3UQ28 1475 aa29.65■■■□□ 2.34
Trim3-202ENSMUST00000106789 Cwc22Q8C5N3 908 aaKnown RBP29.65■■■□□ 2.34
Trim3-202ENSMUST00000106789 Kdm6bQ5NCY0 1641 aa29.65■■■□□ 2.34
Trim3-202ENSMUST00000106789 Dhx9O70133 1380 aaKnown RBP29.64■■■□□ 2.34
Trim3-202ENSMUST00000106789 Slc4a3P16283 1227 aa29.64■■■□□ 2.34
Trim3-202ENSMUST00000106789 Dapk1Q80YE7 1442 aa29.64■■■□□ 2.33
Trim3-202ENSMUST00000106789 Disp1Q3TDN0 1521 aa29.64■■■□□ 2.33
Trim3-202ENSMUST00000106789 SphkapQ6NSW3 1687 aa29.63■■■□□ 2.33
Trim3-202ENSMUST00000106789 Rundc1Q0VDN7 615 aa29.63■■■□□ 2.33
Trim3-202ENSMUST00000106789 Plekhg5Q66T02 1073 aa29.6■■■□□ 2.33
Trim3-202ENSMUST00000106789 Adgrb2Q8CGM1 1561 aa29.58■■■□□ 2.33
Trim3-202ENSMUST00000106789 Plb1Q3TTY0 1478 aa29.58■■■□□ 2.33
Trim3-202ENSMUST00000106789 Kdm3bQ6ZPY7 1562 aa29.57■■■□□ 2.32
Trim3-202ENSMUST00000106789 Il16O54824 1322 aa29.55■■■□□ 2.32
Trim3-202ENSMUST00000106789 Lamc1P02468 1607 aaKnown RBP29.55■■■□□ 2.32
Trim3-202ENSMUST00000106789 AlkP97793 1621 aa29.55■■■□□ 2.32
Trim3-202ENSMUST00000106789 Card11Q8CIS0 1159 aa29.55■■■□□ 2.32
Trim3-202ENSMUST00000106789 Trak1Q6PD31 939 aa29.53■■■□□ 2.32
Trim3-202ENSMUST00000106789 Ttll5Q8CHB8 1328 aa29.52■■■□□ 2.32
Trim3-202ENSMUST00000106789 Rapgef6Q5NCJ1 1609 aa29.51■■■□□ 2.31
Trim3-202ENSMUST00000106789 L3mbtl2P59178 703 aa29.51■■■□□ 2.31
Trim3-202ENSMUST00000106789 Adcy10Q8C0T9 1614 aa29.51■■■□□ 2.31
Trim3-202ENSMUST00000106789 Kif14L0N7N1 1674 aaKnown RBP29.5■■■□□ 2.31
Trim3-202ENSMUST00000106789 Egfem1Q8C088 590 aa29.5■■■□□ 2.31
Trim3-202ENSMUST00000106789 Dhx57Q6P5D3 1388 aaKnown RBP29.5■■■□□ 2.31
Trim3-202ENSMUST00000106789 Arhgap27A2AB59 869 aa29.5■■■□□ 2.31
Trim3-202ENSMUST00000106789 Grwd1Q810D6 446 aaKnown RBP29.5■■■□□ 2.31
Trim3-202ENSMUST00000106789 Kcnh8P59111 1102 aa29.49■■■□□ 2.31
Trim3-202ENSMUST00000106789 Mug2P28666 1451 aa29.48■■■□□ 2.31
Trim3-202ENSMUST00000106789 Mbd5B1AYB6 1498 aa29.48■■■□□ 2.31
Trim3-202ENSMUST00000106789 Arhgef12Q8R4H2 1543 aaKnown RBP29.46■■■□□ 2.31
Trim3-202ENSMUST00000106789 Myom3A2ABU4 1439 aa29.45■■■□□ 2.31
Trim3-202ENSMUST00000106789 Kif21bQ9QXL1 1668 aa29.45■■■□□ 2.3
Trim3-202ENSMUST00000106789 Cc2d2bA0A286YDU8 1405 aa29.43■■■□□ 2.3
Trim3-202ENSMUST00000106789 Naip6Q9JIB6 1403 aa29.43■■■□□ 2.3
Trim3-202ENSMUST00000106789 Abca16E9PWJ7 1678 aa29.42■■■□□ 2.3
Trim3-202ENSMUST00000106789 Mrc2Q64449 1479 aa29.42■■■□□ 2.3
Trim3-202ENSMUST00000106789 Arhgef11Q68FM7 1552 aa29.4■■■□□ 2.3
Trim3-202ENSMUST00000106789 Map3k4O08648 1597 aa29.39■■■□□ 2.3
Trim3-202ENSMUST00000106789 Supt6hQ62383 1726 aaKnown RBP29.39■■■□□ 2.3
Trim3-202ENSMUST00000106789 Cdc42bpaQ3UU96 1719 aa29.38■■■□□ 2.29
Trim3-202ENSMUST00000106789 Wdr7Q920I9 1489 aa29.35■■■□□ 2.29
Trim3-202ENSMUST00000106789 Tcerg1Q8CGF7 1100 aaKnown RBP29.35■■■□□ 2.29
Trim3-202ENSMUST00000106789 Cdk13Q69ZA1 1511 aaKnown RBP29.34■■■□□ 2.29
Trim3-202ENSMUST00000106789 Nup155Q99P88 1391 aaKnown RBP29.34■■■□□ 2.29
Trim3-202ENSMUST00000106789 Setd1bQ8CFT2 1985 aa29.32■■■□□ 2.28
Trim3-202ENSMUST00000106789 Kiaa1551Q5DTW7 1521 aa29.32■■■□□ 2.28
Trim3-202ENSMUST00000106789 Arhgap31A6X8Z5 1425 aa29.31■■■□□ 2.28
Trim3-202ENSMUST00000106789 Tdrd9Q14BI7 1383 aa29.3■■■□□ 2.28
Trim3-202ENSMUST00000106789 Zbtb4Q5F293 982 aa29.28■■■□□ 2.28
Trim3-202ENSMUST00000106789 Shroom2A2ALU4 1481 aa29.27■■■□□ 2.28
Trim3-202ENSMUST00000106789 Map4P27546 1125 aaKnown RBP29.26■■■□□ 2.28
Trim3-202ENSMUST00000106789 Ttbk1Q6PCN3 1308 aa29.26■■■□□ 2.28
Trim3-202ENSMUST00000106789 Rpgrip1lQ8CG73 1264 aa29.26■■■□□ 2.27
Trim3-202ENSMUST00000106789 Ipo9Q91YE6 1041 aa29.26■■■□□ 2.27
Trim3-202ENSMUST00000106789 RalgapbQ8BQZ4 1484 aa29.25■■■□□ 2.27
Trim3-202ENSMUST00000106789 Zbtb7cQ8VCZ7 619 aa29.25■■■□□ 2.27
Trim3-202ENSMUST00000106789 Erbb3Q61526 1339 aa29.23■■■□□ 2.27
Trim3-202ENSMUST00000106789 Ccdc27Q3V036 639 aa29.22■■■□□ 2.27
Trim3-202ENSMUST00000106789 Magi1Q6RHR9 1471 aa29.22■■■□□ 2.27
Trim3-202ENSMUST00000106789 Rock2P70336 1388 aa29.22■■■□□ 2.27
Trim3-202ENSMUST00000106789 Nup160Q9Z0W3 1402 aaKnown RBP29.21■■■□□ 2.27
Trim3-202ENSMUST00000106789 Anp32bQ9EST5 272 aaKnown RBP29.18■■■□□ 2.26
Trim3-202ENSMUST00000106789 Kank1E9Q238 1360 aa29.18■■■□□ 2.26
Trim3-202ENSMUST00000106789 DroshaQ5HZJ0 1373 aaKnown RBP29.17■■■□□ 2.26
Trim3-202ENSMUST00000106789 Abcc2Q8VI47 1543 aa29.17■■■□□ 2.26
Trim3-202ENSMUST00000106789 Trpm2Q91YD4 1506 aa29.17■■■□□ 2.26
Trim3-202ENSMUST00000106789 Zfp444Q3TDV8 331 aaKnown RBP29.16■■■□□ 2.26
Trim3-202ENSMUST00000106789 Fam163aQ8CAA5 168 aa29.16■■■□□ 2.26
Trim3-202ENSMUST00000106789 Prex2Q3LAC4 1598 aa29.16■■■□□ 2.26
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms